RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W VPS62P53285 467 aa7.64□□□□□ -1.19
PRE3YJL001W UBX7P38349 436 aa7.63□□□□□ -1.19
PRE3YJL001W YIR042CP40586 236 aa7.63□□□□□ -1.19
PRE3YJL001W VAC17P25591 423 aa7.62□□□□□ -1.19
PRE3YJL001W CDC60P26637 1090 aaKnown RBP7.62□□□□□ -1.19
PRE3YJL001W DLD1P32891 587 aa7.62□□□□□ -1.19
PRE3YJL001W OCT1P35999 772 aa7.62□□□□□ -1.19
PRE3YJL001W PTK1P36002 662 aaPredicted RBP7.62□□□□□ -1.19
PRE3YJL001W SOH1P38633 127 aa7.62□□□□□ -1.19
PRE3YJL001W ATG1P53104 897 aa7.62□□□□□ -1.19
PRE3YJL001W NSG2P53898 299 aa7.62□□□□□ -1.19
PRE3YJL001W UTP13Q05946 817 aaKnown RBP7.62□□□□□ -1.19
PRE3YJL001W TUB2P02557 457 aaKnown RBP7.61□□□□□ -1.19
PRE3YJL001W LDH1P38139 375 aa7.61□□□□□ -1.19
PRE3YJL001W SSF1P38789 453 aaPredicted RBP7.61□□□□□ -1.19
PRE3YJL001W ACA1P39970 489 aa7.61□□□□□ -1.19
PRE3YJL001W CFT2Q12102 859 aaPredicted RBP7.61□□□□□ -1.19
PRE3YJL001W TY3A-GQ12173 290 aa7.61□□□□□ -1.19
PRE3YJL001W TY3A-IQ99219 290 aa7.61□□□□□ -1.19
PRE3YJL001W SEC18P18759 758 aaKnown RBP7.6□□□□□ -1.19
PRE3YJL001W PHO87P25360 923 aa7.6□□□□□ -1.19
PRE3YJL001W HAL5P38970 855 aaKnown RBP7.6□□□□□ -1.19
PRE3YJL001W INM2Q05533 292 aa7.6□□□□□ -1.19
PRE3YJL001W ECM30Q06673 1274 aa7.6□□□□□ -1.19
PRE3YJL001W SLA1P32790 1244 aa7.59□□□□□ -1.19
PRE3YJL001W MCD4P36051 919 aa7.59□□□□□ -1.19
PRE3YJL001W MOD5P07884 428 aa7.58□□□□□ -1.2
PRE3YJL001W HAP4P14064 554 aa7.58□□□□□ -1.2
PRE3YJL001W MDL2P33311 773 aa7.58□□□□□ -1.2
PRE3YJL001W YBL028CP38202 106 aa7.58□□□□□ -1.2
PRE3YJL001W FIR1P40020 876 aa7.58□□□□□ -1.2
PRE3YJL001W CSI1Q04368 295 aa7.58□□□□□ -1.2
PRE3YJL001W PCL8Q08966 492 aa7.58□□□□□ -1.2
PRE3YJL001W ICL2Q12031 575 aa7.58□□□□□ -1.2
PRE3YJL001W RPS19AP07280 144 aaKnown RBP7.57□□□□□ -1.2
PRE3YJL001W RPS19BP07281 144 aaPredicted RBP7.57□□□□□ -1.2
PRE3YJL001W SUI2P20459 304 aaKnown RBP7.57□□□□□ -1.2
PRE3YJL001W VAB2P40003 282 aa7.57□□□□□ -1.2
PRE3YJL001W MSH4P40965 878 aaPredicted RBP7.57□□□□□ -1.2
PRE3YJL001W LYS14P40971 790 aa7.57□□□□□ -1.2
PRE3YJL001W NOP2P40991 618 aaKnown RBP7.57□□□□□ -1.2
PRE3YJL001W EAR1Q03212 550 aa7.57□□□□□ -1.2
PRE3YJL001W ACS2P52910 683 aaKnown RBP7.56□□□□□ -1.2
PRE3YJL001W YNL193WP53870 558 aa7.56□□□□□ -1.2
PRE3YJL001W PIF1P07271 859 aa7.55□□□□□ -1.2
PRE3YJL001W SRS2P12954 1174 aa7.55□□□□□ -1.2
PRE3YJL001W WHI3P34761 661 aaKnown RBP7.55□□□□□ -1.2
PRE3YJL001W AIM21P40563 679 aa7.55□□□□□ -1.2
PRE3YJL001W SNU71P53207 620 aaKnown RBP7.55□□□□□ -1.2
PRE3YJL001W RPN7Q06103 429 aaKnown RBP7.55□□□□□ -1.2
PRE3YJL001W RRI2Q12348 645 aa7.55□□□□□ -1.2
PRE3YJL001W YOR131CQ12486 218 aa7.55□□□□□ -1.2
PRE3YJL001W YPL034WQ03083 165 aa7.54□□□□□ -1.2
PRE3YJL001W PUF6Q04373 656 aaKnown RBP7.54□□□□□ -1.2
PRE3YJL001W ISR1Q06098 443 aaKnown RBP7.54□□□□□ -1.2
PRE3YJL001W YDL124WQ07551 312 aaKnown RBP7.54□□□□□ -1.2
PRE3YJL001W TSC13Q99190 310 aa7.54□□□□□ -1.2
PRE3YJL001W KIP2P28743 706 aa7.53□□□□□ -1.2
PRE3YJL001W UIP5P36137 443 aa7.53□□□□□ -1.2
PRE3YJL001W BOI1P38041 980 aaKnown RBP7.53□□□□□ -1.2
PRE3YJL001W AFG3P39925 761 aa7.53□□□□□ -1.2
PRE3YJL001W TIF4631P39935 952 aaKnown RBP7.53□□□□□ -1.2
PRE3YJL001W MXR1P40029 184 aa7.53□□□□□ -1.2
PRE3YJL001W ROM1P53046 1155 aa7.53□□□□□ -1.2
PRE3YJL001W BRE5P53741 515 aaKnown RBP7.53□□□□□ -1.2
PRE3YJL001W UBX5Q06682 500 aa7.53□□□□□ -1.2
PRE3YJL001W SUT2Q12286 268 aa7.53□□□□□ -1.2
PRE3YJL001W ECM29P38737 1868 aa7.52□□□□□ -1.21
PRE3YJL001W CYB2P00175 591 aa7.52□□□□□ -1.21
PRE3YJL001W YFL040WP43562 540 aa7.52□□□□□ -1.21
PRE3YJL001W PIP2P52960 996 aa7.52□□□□□ -1.21
PRE3YJL001W MDM20Q12387 796 aaKnown RBP7.52□□□□□ -1.21
PRE3YJL001W MIP1P15801 1254 aa7.51□□□□□ -1.21
PRE3YJL001W PRE10P21242 288 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21not detected
PRE3YJL001W EUG1P32474 517 aa7.51□□□□□ -1.21
PRE3YJL001W GRX7P38068 203 aa7.51□□□□□ -1.21
PRE3YJL001W YFL034WP43564 1073 aa7.51□□□□□ -1.21
PRE3YJL001W FMP30Q02883 468 aa7.51□□□□□ -1.21
PRE3YJL001W KAR5Q04746 504 aa7.51□□□□□ -1.21
PRE3YJL001W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.51□□□□□ -1.21 RIP-Chip
PRE3YJL001W YBL113CQ7M4S9 792 aa7.51□□□□□ -1.21
PRE3YJL001W YMR084WA2P2R3 262 aa7.5□□□□□ -1.21
PRE3YJL001W RPP0P05317 312 aaKnown RBP7.5□□□□□ -1.21
PRE3YJL001W KRS1P15180 591 aaKnown RBP7.5□□□□□ -1.21
PRE3YJL001W PER1P25625 357 aa7.5□□□□□ -1.21
PRE3YJL001W CST26P38226 397 aa7.5□□□□□ -1.21
PRE3YJL001W MET7Q08645 548 aa7.5□□□□□ -1.21
PRE3YJL001W KEL3Q08979 651 aaPredicted RBP7.5□□□□□ -1.21
PRE3YJL001W TUS1Q06412 1307 aa7.5□□□□□ -1.21
PRE3YJL001W LAP2Q10740 671 aa7.49□□□□□ -1.21
PRE3YJL001W VAN1P23642 535 aa7.48□□□□□ -1.21
PRE3YJL001W HEM3P28789 327 aa7.48□□□□□ -1.21
PRE3YJL001W BCS1P32839 456 aa7.48□□□□□ -1.21
PRE3YJL001W STM1P39015 273 aaKnown RBP7.48□□□□□ -1.21
PRE3YJL001W AIM9P40053 627 aaKnown RBP7.48□□□□□ -1.21
PRE3YJL001W YML037CQ03703 340 aa7.48□□□□□ -1.21
PRE3YJL001W HDA3Q06623 655 aa7.48□□□□□ -1.21
PRE3YJL001W PUN1Q06991 263 aa7.48□□□□□ -1.21
PRE3YJL001W AHC1Q12433 566 aa7.48□□□□□ -1.21
PRE3YJL001W YDR034W-BQ6Q5X2 51 aa7.48□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 38 ms