RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C IXR1P33417 597 aa11.05□□□□□ -0.64
MET28YIR017C SAS3P34218 831 aa11.05□□□□□ -0.64
MET28YIR017C BDH2P39713 417 aa11.05□□□□□ -0.64
MET28YIR017C GPB2P39717 880 aa11.05□□□□□ -0.64
MET28YIR017C FMS1P50264 508 aa11.05□□□□□ -0.64
MET28YIR017C ASE1P50275 885 aa11.05□□□□□ -0.64
MET28YIR017C YGL138CP53122 345 aa11.05□□□□□ -0.64
MET28YIR017C DUS1P53759 423 aaKnown RBP11.05□□□□□ -0.64
MET28YIR017C FAR11P53917 953 aa11.05□□□□□ -0.64
MET28YIR017C GIS4Q04233 774 aa11.05□□□□□ -0.64
MET28YIR017C SMD2Q06217 110 aaKnown RBP11.05□□□□□ -0.64
MET28YIR017C CDC6P09119 513 aa11.04□□□□□ -0.64
MET28YIR017C MAL33P38157 468 aa11.04□□□□□ -0.64
MET28YIR017C RRD1P40454 393 aaKnown RBP11.04□□□□□ -0.64
MET28YIR017C BNI5P53890 448 aaKnown RBP11.04□□□□□ -0.64
MET28YIR017C CSM3Q04659 317 aa11.04□□□□□ -0.64
MET28YIR017C CSC1Q06538 782 aa11.04□□□□□ -0.64
MET28YIR017C TY3A-GQ12173 290 aa11.04□□□□□ -0.64
MET28YIR017C SRF1Q12516 437 aa11.04□□□□□ -0.64
MET28YIR017C TY3A-IQ99219 290 aa11.04□□□□□ -0.64
MET28YIR017C CDC19P00549 500 aaKnown RBP11.03□□□□□ -0.64
MET28YIR017C SAM1P10659 382 aaKnown RBP11.03□□□□□ -0.64
MET28YIR017C PKC1P24583 1151 aa11.03□□□□□ -0.64
MET28YIR017C HST1P53685 503 aa11.03□□□□□ -0.64
MET28YIR017C GET3Q12154 354 aaKnown RBP11.03□□□□□ -0.64
MET28YIR017C VPS1P21576 704 aaKnown RBP11.02□□□□□ -0.65
MET28YIR017C RDS1P25611 832 aa11.02□□□□□ -0.65
MET28YIR017C IME2P32581 645 aa11.02□□□□□ -0.65
MET28YIR017C TGL1P34163 548 aa11.02□□□□□ -0.65
MET28YIR017C ATG1P53104 897 aa11.02□□□□□ -0.65
MET28YIR017C EAF7P53911 425 aaKnown RBP11.02□□□□□ -0.65
MET28YIR017C TIP41Q12199 356 aa11.02□□□□□ -0.65
MET28YIR017C SES1P07284 462 aaKnown RBP11.01□□□□□ -0.65
MET28YIR017C THR4P16120 514 aaKnown RBP11.01□□□□□ -0.65
MET28YIR017C EUG1P32474 517 aa11.01□□□□□ -0.65
MET28YIR017C UTR4P32626 227 aa11.01□□□□□ -0.65
MET28YIR017C LIF1P53150 421 aa11.01□□□□□ -0.65
MET28YIR017C TMA64Q04600 565 aaKnown RBP11.01□□□□□ -0.65
MET28YIR017C COG8Q04632 607 aa11.01□□□□□ -0.65
MET28YIR017C SGD1Q06132 899 aa11.01□□□□□ -0.65
MET28YIR017C SPH1Q06160 661 aa11.01□□□□□ -0.65
MET28YIR017C DCS2Q12123 353 aa11.01□□□□□ -0.65
MET28YIR017C SRO9P25567 434 aaKnown RBP11□□□□□ -0.65
MET28YIR017C PAN5P38787 379 aa11□□□□□ -0.65
MET28YIR017C HYR1P40581 163 aaKnown RBP11□□□□□ -0.65
MET28YIR017C RET3P53600 189 aa11□□□□□ -0.65
MET28YIR017C RTC4P53850 401 aa11□□□□□ -0.65
MET28YIR017C YLR225CQ05948 407 aaKnown RBP11□□□□□ -0.65
MET28YIR017C PEX19Q07418 342 aa11□□□□□ -0.65
MET28YIR017C GUD1Q07729 489 aa11□□□□□ -0.65
MET28YIR017C RKM4Q12504 494 aa11□□□□□ -0.65
MET28YIR017C TY1B-AO13527 1196 aaKnown RBP10.99□□□□□ -0.65
MET28YIR017C HXK1P04806 485 aaKnown RBP10.99□□□□□ -0.65
MET28YIR017C RGP1P16664 663 aa10.99□□□□□ -0.65
MET28YIR017C NDT80P38830 627 aa10.99□□□□□ -0.65
MET28YIR017C DJP1P40564 432 aa10.99□□□□□ -0.65
MET28YIR017C YGR125WP53273 1036 aa10.99□□□□□ -0.65
MET28YIR017C DSE4P53753 1117 aa10.99□□□□□ -0.65
MET28YIR017C YOR296WQ08748 1289 aa10.99□□□□□ -0.65
MET28YIR017C OXR1Q08952 273 aa10.99□□□□□ -0.65
MET28YIR017C HAA1Q12753 694 aaKnown RBP10.99□□□□□ -0.65
MET28YIR017C MCR1P36060 302 aaKnown RBP10.98□□□□□ -0.65
MET28YIR017C SUL1P38359 859 aa10.98□□□□□ -0.65
MET28YIR017C TRS120Q04183 1289 aa10.98□□□□□ -0.65
MET28YIR017C EIS1Q05050 843 aaKnown RBP10.98□□□□□ -0.65
MET28YIR017C SLK19Q08581 821 aaKnown RBP10.98□□□□□ -0.65
MET28YIR017C SRP40P32583 406 aaPredicted RBP10.97□□□□□ -0.65
MET28YIR017C UGA4P32837 571 aa10.97□□□□□ -0.65
MET28YIR017C DUS3Q06053 668 aaKnown RBP10.97□□□□□ -0.65
MET28YIR017C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.97□□□□□ -0.65not detected
MET28YIR017C KEX1P09620 729 aa10.96□□□□□ -0.65
MET28YIR017C SHP1P34223 423 aa10.96□□□□□ -0.65
MET28YIR017C STT3P39007 718 aaKnown RBP10.96□□□□□ -0.65
MET28YIR017C NCS6P53088 359 aa10.96□□□□□ -0.65
MET28YIR017C HAP5Q02516 242 aa10.96□□□□□ -0.65
MET28YIR017C OYE2Q03558 400 aaKnown RBP10.96□□□□□ -0.65
MET28YIR017C PHR1P05066 565 aaKnown RBP RIP-Chip data10.95□□□□□ -0.66not detected
MET28YIR017C ALG1P16661 449 aa10.95□□□□□ -0.66
MET28YIR017C SEC8P32855 1065 aa10.95□□□□□ -0.66
MET28YIR017C ORC6P38826 435 aa10.95□□□□□ -0.66
MET28YIR017C HUL5P53119 910 aa10.95□□□□□ -0.66
MET28YIR017C YGR273CP53329 174 aa10.95□□□□□ -0.66
MET28YIR017C SLD5Q03406 294 aa10.95□□□□□ -0.66
MET28YIR017C ISA1Q07821 250 aaPredicted RBP10.95□□□□□ -0.66
MET28YIR017C ETT1Q08421 412 aaKnown RBP10.95□□□□□ -0.66
MET28YIR017C ARP6Q12509 438 aa10.95□□□□□ -0.66
MET28YIR017C GSY1P23337 708 aa10.94□□□□□ -0.66
MET28YIR017C MSP1P28737 362 aa10.94□□□□□ -0.66
MET28YIR017C ELM1P32801 640 aa10.94□□□□□ -0.66
MET28YIR017C CCT5P40413 562 aaKnown RBP10.94□□□□□ -0.66
MET28YIR017C RSM25P40496 264 aa10.94□□□□□ -0.66
MET28YIR017C CIT3P43635 486 aa10.94□□□□□ -0.66
MET28YIR017C SDA1P53313 767 aaKnown RBP10.94□□□□□ -0.66
MET28YIR017C MFM1Q02783 413 aa10.94□□□□□ -0.66
MET28YIR017C BUL2Q03758 920 aaKnown RBP10.94□□□□□ -0.66
MET28YIR017C AIM33Q04516 312 aa10.94□□□□□ -0.66
MET28YIR017C DUS4Q06063 367 aa10.94□□□□□ -0.66
MET28YIR017C ERP3Q12403 225 aa10.94□□□□□ -0.66
MET28YIR017C MBR1P23493 339 aa10.93□□□□□ -0.66
MET28YIR017C ISW1P38144 1129 aa10.93□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms