RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C ATG14P38270 344 aa4.83□□□□□ -1.64
TPM2YIL138C HDA2Q06629 674 aa4.83□□□□□ -1.64
TPM2YIL138C SAM35P14693 329 aa4.82□□□□□ -1.64
TPM2YIL138C SRO9P25567 434 aaKnown RBP4.82□□□□□ -1.64
TPM2YIL138C UTP5Q04177 643 aaKnown RBP4.82□□□□□ -1.64
TPM2YIL138C TAF7Q05021 590 aa4.82□□□□□ -1.64
TPM2YIL138C SOD2P00447 233 aa4.81□□□□□ -1.64
TPM2YIL138C KAR2P16474 682 aaKnown RBP4.81□□□□□ -1.64
TPM2YIL138C VMA4P22203 233 aaKnown RBP4.81□□□□□ -1.64
TPM2YIL138C ENV11P53246 860 aa4.81□□□□□ -1.64
TPM2YIL138C SNO2P53823 222 aa4.81□□□□□ -1.64
TPM2YIL138C RSA3Q05942 220 aaKnown RBP4.81□□□□□ -1.64
TPM2YIL138C MSH3P25336 1018 aa4.8□□□□□ -1.64
TPM2YIL138C GCD6P32501 712 aaKnown RBP4.8□□□□□ -1.64
TPM2YIL138C XKS1P42826 600 aa4.8□□□□□ -1.64
TPM2YIL138C VPS35P34110 944 aa4.79□□□□□ -1.64
TPM2YIL138C GEF1P37020 779 aa4.79□□□□□ -1.64
TPM2YIL138C RKM2Q03942 479 aa4.79□□□□□ -1.64
TPM2YIL138C HAT1Q12341 374 aa4.79□□□□□ -1.64
TPM2YIL138C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
TPM2YIL138C PRP40P33203 583 aaKnown RBP4.78□□□□□ -1.64
TPM2YIL138C TOD6P34219 525 aa4.78□□□□□ -1.64
TPM2YIL138C RSM26P47141 266 aa4.78□□□□□ -1.64
TPM2YIL138C SQT1P35184 431 aa4.77□□□□□ -1.65
TPM2YIL138C VPS53P47061 822 aa4.77□□□□□ -1.65
TPM2YIL138C PEX13P80667 386 aa4.77□□□□□ -1.65
TPM2YIL138C GSF2Q04697 403 aaKnown RBP4.77□□□□□ -1.65
TPM2YIL138C NBA1Q08229 501 aaKnown RBP4.77□□□□□ -1.65
TPM2YIL138C YPL277CQ08989 487 aa4.77□□□□□ -1.65
TPM2YIL138C RPS13P05756 151 aaKnown RBP4.76□□□□□ -1.65
TPM2YIL138C AIM26P32858 118 aa4.76□□□□□ -1.65
TPM2YIL138C QNS1P38795 714 aaKnown RBP4.76□□□□□ -1.65
TPM2YIL138C YJL045WP47052 634 aa4.76□□□□□ -1.65
TPM2YIL138C ULP1Q02724 621 aa4.76□□□□□ -1.65
TPM2YIL138C ADD66P36040 267 aa4.75□□□□□ -1.65
TPM2YIL138C YNR063WP53749 607 aa4.75□□□□□ -1.65
TPM2YIL138C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
TPM2YIL138C RSC58Q07979 502 aa4.75□□□□□ -1.65
TPM2YIL138C YLR358CO13565 187 aa4.74□□□□□ -1.65
TPM2YIL138C PHO4P07270 312 aaKnown RBP4.74□□□□□ -1.65
TPM2YIL138C YSC84P32793 468 aa4.74□□□□□ -1.65
TPM2YIL138C UGA4P32837 571 aa4.74□□□□□ -1.65
TPM2YIL138C RDH54P38086 958 aa4.74□□□□□ -1.65
TPM2YIL138C PEX28P38848 579 aa4.74□□□□□ -1.65
TPM2YIL138C DAL4Q04895 635 aa4.74□□□□□ -1.65
TPM2YIL138C SPS1P08458 490 aa4.73□□□□□ -1.65
TPM2YIL138C YHL050CP38721 697 aa4.73□□□□□ -1.65
TPM2YIL138C YHR219WP38900 624 aa4.73□□□□□ -1.65
TPM2YIL138C CLU1Q03690 1277 aaKnown RBP4.73□□□□□ -1.65
TPM2YIL138C YOR352WQ08816 343 aa4.73□□□□□ -1.65
TPM2YIL138C OXR1Q08952 273 aa4.73□□□□□ -1.65
TPM2YIL138C COQ4O13525 335 aa4.72□□□□□ -1.65
TPM2YIL138C PRE10P21242 288 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65 RIP-Chip
TPM2YIL138C CCZ1P38273 704 aa4.72□□□□□ -1.65
TPM2YIL138C PPX1P38698 397 aa4.71□□□□□ -1.66
TPM2YIL138C HNT2P49775 206 aa4.71□□□□□ -1.66
TPM2YIL138C YGL140CP53120 1219 aa4.71□□□□□ -1.66
TPM2YIL138C ADI1Q03677 179 aa4.71□□□□□ -1.66
TPM2YIL138C SEC23P15303 768 aaKnown RBP4.7□□□□□ -1.66
TPM2YIL138C YPL109CQ02981 657 aa4.7□□□□□ -1.66
TPM2YIL138C EST2Q06163 884 aa4.7□□□□□ -1.66
TPM2YIL138C TAF13P11747 167 aa4.69□□□□□ -1.66
TPM2YIL138C ABZ1P37254 787 aaPredicted RBP4.69□□□□□ -1.66
TPM2YIL138C BAP2P38084 609 aa4.69□□□□□ -1.66
TPM2YIL138C DAK2P43550 591 aa4.69□□□□□ -1.66
TPM2YIL138C TNA1P53322 534 aa4.69□□□□□ -1.66
TPM2YIL138C YDR132CQ03900 495 aa4.69□□□□□ -1.66
TPM2YIL138C SGD1Q06132 899 aa4.69□□□□□ -1.66
TPM2YIL138C KIP1P28742 1111 aa4.68□□□□□ -1.66
TPM2YIL138C SHM2P37291 469 aaKnown RBP4.68□□□□□ -1.66
TPM2YIL138C LAM1P38851 1228 aa4.68□□□□□ -1.66
TPM2YIL138C STM1P39015 273 aaKnown RBP4.68□□□□□ -1.66
TPM2YIL138C SEC26P41810 973 aaKnown RBP4.68□□□□□ -1.66
TPM2YIL138C HOS3Q02959 697 aaKnown RBP4.68□□□□□ -1.66
TPM2YIL138C RCL1Q08096 367 aaPredicted RBP4.68□□□□□ -1.66
TPM2YIL138C CTS1P29029 562 aa4.67□□□□□ -1.66
TPM2YIL138C MET4P32389 672 aa4.67□□□□□ -1.66
TPM2YIL138C AFG2P32794 780 aa4.67□□□□□ -1.66
TPM2YIL138C PIK1P39104 1066 aa4.67□□□□□ -1.66
TPM2YIL138C RPN3P40016 523 aaKnown RBP4.67□□□□□ -1.66
TPM2YIL138C RSB1Q08417 382 aa4.67□□□□□ -1.66
TPM2YIL138C PTC5Q12511 572 aa4.67□□□□□ -1.66
TPM2YIL138C TUB2P02557 457 aaKnown RBP4.66□□□□□ -1.66
TPM2YIL138C HEM13P11353 328 aaKnown RBP4.66□□□□□ -1.66
TPM2YIL138C SSF1P38789 453 aaPredicted RBP4.66□□□□□ -1.66
TPM2YIL138C TAT2P38967 592 aa4.66□□□□□ -1.66
TPM2YIL138C MEF2P39677 819 aa4.66□□□□□ -1.66
TPM2YIL138C SPT20P50875 604 aa4.66□□□□□ -1.66
TPM2YIL138C GCN5Q03330 439 aa4.66□□□□□ -1.66
TPM2YIL138C GIS1Q03833 894 aa4.66□□□□□ -1.66
TPM2YIL138C TOS4Q06266 489 aa4.66□□□□□ -1.66
TPM2YIL138C MSC6Q08818 692 aaKnown RBP4.66□□□□□ -1.66
TPM2YIL138C YPL260WQ08977 551 aa4.66□□□□□ -1.66
TPM2YIL138C PUF4P25339 888 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
TPM2YIL138C MPT5P39016 859 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
TPM2YIL138C CYC1P00044 109 aaPredicted RBP4.64□□□□□ -1.67
TPM2YIL138C HXK1P04806 485 aaKnown RBP4.64□□□□□ -1.67
TPM2YIL138C DOM34P33309 386 aa4.64□□□□□ -1.67
TPM2YIL138C ALG3P38179 458 aa4.64□□□□□ -1.67
TPM2YIL138C GPB2P39717 880 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms