RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W HEM13P11353 328 aaKnown RBP6.92□□□□□ -1.3
SEC28YIL076W RDH54P38086 958 aa6.92□□□□□ -1.3
SEC28YIL076W ATG14P38270 344 aa6.92□□□□□ -1.3
SEC28YIL076W PIC2P40035 300 aa6.92□□□□□ -1.3
SEC28YIL076W YNR063WP53749 607 aa6.92□□□□□ -1.3
SEC28YIL076W MGE1P38523 228 aa6.91□□□□□ -1.3
SEC28YIL076W TPP1Q03796 238 aa6.91□□□□□ -1.3
SEC28YIL076W PUS7Q08647 676 aaKnown RBP6.91□□□□□ -1.3
SEC28YIL076W SEC23P15303 768 aaKnown RBP6.9□□□□□ -1.3
SEC28YIL076W MCM2P29469 868 aa6.9□□□□□ -1.3
SEC28YIL076W NMD3P38861 518 aaKnown RBP6.9□□□□□ -1.3
SEC28YIL076W RPS26AP39938 119 aaKnown RBP6.9□□□□□ -1.3
SEC28YIL076W RPS26BP39939 119 aaKnown RBP6.9□□□□□ -1.3
SEC28YIL076W YLR257WQ06146 321 aaKnown RBP6.9□□□□□ -1.3
SEC28YIL076W RRP15Q06511 250 aaPredicted RBP6.9□□□□□ -1.3
SEC28YIL076W RET1P22276 1149 aaKnown RBP6.89□□□□□ -1.31
SEC28YIL076W PRE9P23638 258 aaKnown RBP6.89□□□□□ -1.31
SEC28YIL076W HSE1P38753 452 aa6.89□□□□□ -1.31
SEC28YIL076W RSA3Q05942 220 aaKnown RBP6.89□□□□□ -1.31
SEC28YIL076W LAP2Q10740 671 aa6.89□□□□□ -1.31
SEC28YIL076W MCD1Q12158 566 aa6.89□□□□□ -1.31
SEC28YIL076W RAD2P07276 1031 aa6.88□□□□□ -1.31
SEC28YIL076W CYC8P14922 966 aa6.88□□□□□ -1.31
SEC28YIL076W HEM3P28789 327 aa6.88□□□□□ -1.31
SEC28YIL076W ADD66P36040 267 aa6.88□□□□□ -1.31
SEC28YIL076W MRPS18P42847 217 aa6.88□□□□□ -1.31
SEC28YIL076W TRE1Q08919 783 aa6.88□□□□□ -1.31
SEC28YIL076W FYV10P40492 516 aa6.87□□□□□ -1.31
SEC28YIL076W AVT1P47082 602 aa6.87□□□□□ -1.31
SEC28YIL076W YJR107WP47145 328 aa6.87□□□□□ -1.31
SEC28YIL076W RKM2Q03942 479 aa6.87□□□□□ -1.31
SEC28YIL076W SPR28Q04921 423 aa6.87□□□□□ -1.31
SEC28YIL076W PEX7P39108 375 aa6.86□□□□□ -1.31
SEC28YIL076W SSY1Q03770 852 aa6.86□□□□□ -1.31
SEC28YIL076W EST2Q06163 884 aa6.86□□□□□ -1.31
SEC28YIL076W DED1P06634 604 aaKnown RBP6.85□□□□□ -1.31
SEC28YIL076W PRO1P32264 428 aa6.85□□□□□ -1.31
SEC28YIL076W POL12P38121 705 aaPredicted RBP6.85□□□□□ -1.31
SEC28YIL076W HRK1Q08732 759 aaKnown RBP6.85□□□□□ -1.31
SEC28YIL076W ADP1P25371 1049 aa6.84□□□□□ -1.31
SEC28YIL076W HSP78P33416 811 aa6.84□□□□□ -1.31
SEC28YIL076W LRG1P35688 1017 aa6.84□□□□□ -1.31
SEC28YIL076W QNS1P38795 714 aaKnown RBP6.84□□□□□ -1.31
SEC28YIL076W HDA2Q06629 674 aa6.84□□□□□ -1.31
SEC28YIL076W AFG2P32794 780 aa6.83□□□□□ -1.32
SEC28YIL076W PTC7P38797 343 aa6.83□□□□□ -1.32
SEC28YIL076W YJL045WP47052 634 aa6.83□□□□□ -1.32
SEC28YIL076W TAF13P11747 167 aa6.82□□□□□ -1.32
SEC28YIL076W YHL012WP38709 493 aa6.82□□□□□ -1.32
SEC28YIL076W GTS1P40956 396 aa6.82□□□□□ -1.32
SEC28YIL076W VPS53P47061 822 aa6.82□□□□□ -1.32
SEC28YIL076W DFG16Q99234 619 aa6.82□□□□□ -1.32
SEC28YIL076W SAM35P14693 329 aa6.81□□□□□ -1.32
SEC28YIL076W ROD1Q02805 837 aa6.81□□□□□ -1.32
SEC28YIL076W ASF1P32447 279 aa6.8□□□□□ -1.32
SEC28YIL076W SEC8P32855 1065 aa6.8□□□□□ -1.32
SEC28YIL076W MRL1Q06815 381 aa6.8□□□□□ -1.32
SEC28YIL076W LPX1Q12405 387 aaKnown RBP6.8□□□□□ -1.32
SEC28YIL076W SEG2P34250 1132 aa6.79□□□□□ -1.32
SEC28YIL076W ALG3P38179 458 aa6.79□□□□□ -1.32
SEC28YIL076W SIW14P53965 281 aa6.79□□□□□ -1.32
SEC28YIL076W ESF1Q06344 628 aaKnown RBP6.79□□□□□ -1.32
SEC28YIL076W PTC5Q12511 572 aa6.79□□□□□ -1.32
SEC28YIL076W PEP7P32609 515 aa6.78□□□□□ -1.32
SEC28YIL076W ELM1P32801 640 aa6.78□□□□□ -1.32
SEC28YIL076W IRC24P40580 263 aa6.78□□□□□ -1.32
SEC28YIL076W ECL1P48235 211 aa6.78□□□□□ -1.32
SEC28YIL076W GNP1P48813 663 aa6.78□□□□□ -1.32
SEC28YIL076W RAT1Q02792 1006 aaKnown RBP6.78□□□□□ -1.32
SEC28YIL076W GCR1P07261 785 aa6.77□□□□□ -1.33
SEC28YIL076W KIP1P28742 1111 aa6.77□□□□□ -1.33
SEC28YIL076W MDL2P33311 773 aa6.77□□□□□ -1.33
SEC28YIL076W GPB2P39717 880 aa6.77□□□□□ -1.33
SEC28YIL076W ORC3P54790 616 aa6.77□□□□□ -1.33
SEC28YIL076W OYE2Q03558 400 aaKnown RBP6.77□□□□□ -1.33
SEC28YIL076W AOS1Q06624 347 aa6.77□□□□□ -1.33
SEC28YIL076W MKK2P32491 506 aa6.76□□□□□ -1.33
SEC28YIL076W YSC84P32793 468 aa6.76□□□□□ -1.33
SEC28YIL076W HXT13P39924 564 aa6.76□□□□□ -1.33
SEC28YIL076W HXT17P53631 564 aa6.76□□□□□ -1.33
SEC28YIL076W HXT15P54854 567 aa6.76□□□□□ -1.33
SEC28YIL076W RNQ1P25367 405 aa6.75□□□□□ -1.33
SEC28YIL076W ENT3P47160 408 aa6.75□□□□□ -1.33
SEC28YIL076W SRO9P25567 434 aaKnown RBP6.74□□□□□ -1.33
SEC28YIL076W GAS1P22146 559 aaKnown RBP6.73□□□□□ -1.33
SEC28YIL076W COQ4O13525 335 aa6.72□□□□□ -1.33
SEC28YIL076W AIM26P32858 118 aa6.72□□□□□ -1.33
SEC28YIL076W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
SEC28YIL076W RCL1Q08096 367 aaPredicted RBP6.72□□□□□ -1.33
SEC28YIL076W SPO21Q12411 609 aa6.72□□□□□ -1.33
SEC28YIL076W SYP1P25623 870 aaKnown RBP6.71□□□□□ -1.34
SEC28YIL076W RMD1Q03441 430 aa6.71□□□□□ -1.34
SEC28YIL076W YPL260WQ08977 551 aa6.71□□□□□ -1.34
SEC28YIL076W TNA1P53322 534 aa6.7□□□□□ -1.34
SEC28YIL076W HOS3Q02959 697 aaKnown RBP6.7□□□□□ -1.34
SEC28YIL076W RSC58Q07979 502 aa6.7□□□□□ -1.34
SEC28YIL076W YDL177CQ12257 170 aa6.7□□□□□ -1.34
SEC28YIL076W TSA1P34760 196 aaKnown RBP6.69□□□□□ -1.34
SEC28YIL076W RGD1P38339 666 aa6.69□□□□□ -1.34
SEC28YIL076W ETP1P38748 585 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms