RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C CIT3P43635 486 aa3.38□□□□□ -1.87
NMD2YHR077C DMA2P53924 522 aa3.38□□□□□ -1.87
NMD2YHR077C UBX2Q04228 584 aa3.38□□□□□ -1.87
NMD2YHR077C YDR341CQ05506 607 aaKnown RBP3.38□□□□□ -1.87
NMD2YHR077C SUE1Q06524 206 aa3.38□□□□□ -1.87
NMD2YHR077C ADE17P38009 592 aaKnown RBP3.38□□□□□ -1.87
NMD2YHR077C EBS1Q03466 884 aaKnown RBP3.38□□□□□ -1.87
NMD2YHR077C DPL1Q05567 589 aa3.38□□□□□ -1.87
NMD2YHR077C MIP1P15801 1254 aa3.38□□□□□ -1.87
NMD2YHR077C SRM1P21827 482 aa3.38□□□□□ -1.87
NMD2YHR077C STV1P37296 890 aa3.38□□□□□ -1.87
NMD2YHR077C MIP6P38760 659 aaKnown RBP3.38□□□□□ -1.87
NMD2YHR077C CCT3P39077 534 aaKnown RBP3.38□□□□□ -1.87
NMD2YHR077C SEC9P40357 651 aa3.38□□□□□ -1.87
NMD2YHR077C EFM4P40516 257 aa3.38□□□□□ -1.87
NMD2YHR077C PUS6P53294 404 aa3.38□□□□□ -1.87
NMD2YHR077C HPC2Q01448 625 aa3.38□□□□□ -1.87
NMD2YHR077C EIS1Q05050 843 aaKnown RBP3.38□□□□□ -1.87
NMD2YHR077C ADY4Q05955 493 aa3.38□□□□□ -1.87
NMD2YHR077C YDL057WQ07379 328 aa3.38□□□□□ -1.87
NMD2YHR077C SIL1Q08199 421 aa3.38□□□□□ -1.87
NMD2YHR077C YOR296WQ08748 1289 aa3.38□□□□□ -1.87
NMD2YHR077C YPL260WQ08977 551 aa3.38□□□□□ -1.87
NMD2YHR077C HMI1Q12039 706 aa3.38□□□□□ -1.87
NMD2YHR077C PSF3Q12146 194 aa3.38□□□□□ -1.87
NMD2YHR077C FOB1O13329 566 aa3.37□□□□□ -1.87
NMD2YHR077C HIS4P00815 799 aaKnown RBP3.37□□□□□ -1.87
NMD2YHR077C PHR1P05066 565 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
NMD2YHR077C ACE2P21192 770 aa3.37□□□□□ -1.87
NMD2YHR077C PRE8P23639 250 aa3.37□□□□□ -1.87
NMD2YHR077C YKU70P32807 602 aa3.37□□□□□ -1.87
NMD2YHR077C GSM1P42950 618 aa3.37□□□□□ -1.87
NMD2YHR077C JJJ2P46997 583 aa3.37□□□□□ -1.87
NMD2YHR077C PIP2P52960 996 aa3.37□□□□□ -1.87
NMD2YHR077C CAF130P53280 1122 aaPredicted RBP3.37□□□□□ -1.87
NMD2YHR077C ALF1P53904 254 aa3.37□□□□□ -1.87
NMD2YHR077C TRS120Q04183 1289 aa3.37□□□□□ -1.87
NMD2YHR077C YLR326WQ06170 240 aaKnown RBP3.37□□□□□ -1.87
NMD2YHR077C CSC1Q06538 782 aa3.37□□□□□ -1.87
NMD2YHR077C IRC3Q06683 689 aa3.37□□□□□ -1.87
NMD2YHR077C WHI4Q07655 649 aaKnown RBP3.37□□□□□ -1.87
NMD2YHR077C KEL3Q08979 651 aaPredicted RBP3.37□□□□□ -1.87
NMD2YHR077C CEX1Q12453 761 aa3.37□□□□□ -1.87
NMD2YHR077C PET111P08468 800 aa3.37□□□□□ -1.87
NMD2YHR077C KIN1P13185 1064 aa3.37□□□□□ -1.87
NMD2YHR077C SEC65P29478 273 aa3.37□□□□□ -1.87
NMD2YHR077C PET10P36139 283 aa3.37□□□□□ -1.87
NMD2YHR077C HUL4P40985 892 aa3.37□□□□□ -1.87
NMD2YHR077C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
NMD2YHR077C ENP2P48234 707 aaKnown RBP3.37□□□□□ -1.87
NMD2YHR077C MOT1P32333 1867 aa3.37□□□□□ -1.87
NMD2YHR077C SAM2P19358 384 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C MAK11P20484 414 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C MRC1P25588 1096 aa3.36□□□□□ -1.87
NMD2YHR077C ICL1P28240 557 aaPredicted RBP3.36□□□□□ -1.87
NMD2YHR077C CAB3P36076 571 aa3.36□□□□□ -1.87
NMD2YHR077C TOM71P38825 639 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C KEL1P38853 1164 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C RRP8P38961 392 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C FOL1P53848 824 aa3.36□□□□□ -1.87
NMD2YHR077C ERG5P54781 538 aa3.36□□□□□ -1.87
NMD2YHR077C MRD1Q06106 887 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C TCO89Q08921 799 aa3.36□□□□□ -1.87
NMD2YHR077C CWC2Q12046 339 aaPredicted RBP3.36□□□□□ -1.87
NMD2YHR077C LAA1P39526 2014 aa3.36□□□□□ -1.87
NMD2YHR077C PPR1P07272 904 aaPredicted RBP3.36□□□□□ -1.87
NMD2YHR077C SEC23P15303 768 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C SPO12P17123 173 aa3.36□□□□□ -1.87
NMD2YHR077C UBC1P21734 215 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C RAD57P25301 460 aa3.36□□□□□ -1.87
NMD2YHR077C PSO2P30620 661 aa3.36□□□□□ -1.87
NMD2YHR077C HXT1P32465 570 aa3.36□□□□□ -1.87
NMD2YHR077C MFT1P33441 392 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C YKL222CP35995 705 aa3.36□□□□□ -1.87
NMD2YHR077C GAA1P39012 614 aa3.36□□□□□ -1.87
NMD2YHR077C TIF4631P39935 952 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C UBA2P52488 636 aa3.36□□□□□ -1.87
NMD2YHR077C VPS30Q02948 557 aa3.36□□□□□ -1.87
NMD2YHR077C PCL8Q08966 492 aa3.36□□□□□ -1.87
NMD2YHR077C NOP58Q12499 511 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C RMP1Q12530 201 aa3.36□□□□□ -1.87
NMD2YHR077C MSH1P25846 959 aa3.36□□□□□ -1.87
NMD2YHR077C RPL8BP29453 256 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C CIN4P39110 191 aa3.36□□□□□ -1.87
NMD2YHR077C VHR2P40041 505 aa3.36□□□□□ -1.87
NMD2YHR077C VFA1P40080 203 aa3.36□□□□□ -1.87
NMD2YHR077C TFG2P41896 400 aaPredicted RBP3.36□□□□□ -1.87
NMD2YHR077C CTR1P49573 406 aa3.36□□□□□ -1.87
NMD2YHR077C NGL3Q03210 505 aa3.36□□□□□ -1.87
NMD2YHR077C FUS2Q05670 677 aa3.36□□□□□ -1.87
NMD2YHR077C NEW1Q08972 1196 aaKnown RBP3.36□□□□□ -1.87
NMD2YHR077C TIP41Q12199 356 aa3.36□□□□□ -1.87
NMD2YHR077C GRX6Q12438 231 aa3.36□□□□□ -1.87
NMD2YHR077C CIT1P00890 479 aa3.35□□□□□ -1.87
NMD2YHR077C RPC25P35718 212 aa3.35□□□□□ -1.87
NMD2YHR077C PAN5P38787 379 aa3.35□□□□□ -1.87
NMD2YHR077C CTM1P38818 585 aa3.35□□□□□ -1.87
NMD2YHR077C BIM1P40013 344 aa3.35□□□□□ -1.87
NMD2YHR077C ATG3P40344 310 aa3.35□□□□□ -1.87
NMD2YHR077C ALG2P43636 503 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms