RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C CCC2P38995 1004 aa3.42□□□□□ -1.86
RPN1YHR027C MAM1P40065 302 aa3.42□□□□□ -1.86
RPN1YHR027C MDJ2P42834 146 aa3.42□□□□□ -1.86
RPN1YHR027C PCL10P53124 433 aa3.42□□□□□ -1.86
RPN1YHR027C YLR257WQ06146 321 aaKnown RBP3.42□□□□□ -1.86
RPN1YHR027C GPR1Q12361 961 aa3.42□□□□□ -1.86
RPN1YHR027C RKM4Q12504 494 aa3.42□□□□□ -1.86
RPN1YHR027C RPO41P13433 1351 aaKnown RBP3.42□□□□□ -1.86
RPN1YHR027C TRP5P00931 707 aaKnown RBP3.42□□□□□ -1.86
RPN1YHR027C HIS3P06633 220 aa3.42□□□□□ -1.86
RPN1YHR027C NUP120P35729 1037 aa3.42□□□□□ -1.86
RPN1YHR027C OCT1P35999 772 aa3.42□□□□□ -1.86
RPN1YHR027C REV7P38927 245 aa3.42□□□□□ -1.86
RPN1YHR027C YEL023CP39992 682 aa3.42□□□□□ -1.86
RPN1YHR027C SCS2P40075 244 aaKnown RBP3.42□□□□□ -1.86
RPN1YHR027C RTR1P40084 226 aaPredicted RBP3.42□□□□□ -1.86
RPN1YHR027C RPT2P40327 437 aaKnown RBP3.42□□□□□ -1.86
RPN1YHR027C OSW7P43611 510 aa3.42□□□□□ -1.86
RPN1YHR027C CWC15Q03772 175 aaKnown RBP3.42□□□□□ -1.86
RPN1YHR027C FUS2Q05670 677 aa3.42□□□□□ -1.86
RPN1YHR027C SSQ1Q05931 657 aaPredicted RBP3.42□□□□□ -1.86
RPN1YHR027C SGD1Q06132 899 aa3.42□□□□□ -1.86
RPN1YHR027C RSC2Q06488 889 aa3.42□□□□□ -1.86
RPN1YHR027C BUD21Q08492 214 aaPredicted RBP3.42□□□□□ -1.86
RPN1YHR027C TMA16Q08687 178 aa3.42□□□□□ -1.86
RPN1YHR027C GNT1Q12096 491 aa3.42□□□□□ -1.86
RPN1YHR027C MDS3P53094 1487 aa3.42□□□□□ -1.86
RPN1YHR027C ITR2P30606 609 aa3.41□□□□□ -1.86
RPN1YHR027C APD1P38281 316 aa3.41□□□□□ -1.86
RPN1YHR027C REI1P38344 393 aaPredicted RBP3.41□□□□□ -1.86
RPN1YHR027C CIC1P38779 376 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C RTS1P38903 757 aa3.41□□□□□ -1.86
RPN1YHR027C YHB1P39676 399 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C ATG36P46983 293 aa3.41□□□□□ -1.86
RPN1YHR027C KEL2P50090 882 aa3.41□□□□□ -1.86
RPN1YHR027C RPA14P50106 137 aa3.41□□□□□ -1.86
RPN1YHR027C PRP43P53131 767 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C LSG1P53145 640 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C MAG2Q06436 670 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C ATG23Q06671 453 aa3.41□□□□□ -1.86
RPN1YHR027C OCA6Q12454 224 aa3.41□□□□□ -1.86
RPN1YHR027C DDP1Q99321 188 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C SSK22P25390 1331 aaPredicted RBP3.41□□□□□ -1.86
RPN1YHR027C ADE2P21264 571 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C OSM1P21375 501 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C GDA1P32621 518 aa3.41□□□□□ -1.86
RPN1YHR027C MRP8P35719 219 aa3.41□□□□□ -1.86
RPN1YHR027C PTC4P38089 393 aa3.41□□□□□ -1.86
RPN1YHR027C FKH1P40466 484 aa3.41□□□□□ -1.86
RPN1YHR027C FYV10P40492 516 aa3.41□□□□□ -1.86
RPN1YHR027C GVP36P40531 326 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C MIC19P43594 170 aa3.41□□□□□ -1.86
RPN1YHR027C TRS85P46944 698 aa3.41□□□□□ -1.86
RPN1YHR027C APT1P49435 187 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C IMD4P50094 524 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C TEL2P53038 688 aa3.41□□□□□ -1.86
RPN1YHR027C UTP22P53254 1237 aaPredicted RBP3.41□□□□□ -1.86
RPN1YHR027C SDA1P53313 767 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C ADA2Q02336 434 aa3.41□□□□□ -1.86
RPN1YHR027C DML1Q03652 475 aa3.41□□□□□ -1.86
RPN1YHR027C PPM1Q04081 328 aa3.41□□□□□ -1.86
RPN1YHR027C SXM1Q04175 944 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C SPP382Q06411 708 aaPredicted RBP3.41□□□□□ -1.86
RPN1YHR027C NOP12Q08208 459 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C SGT2Q12118 346 aaKnown RBP3.41□□□□□ -1.86
RPN1YHR027C VMR1P38735 1592 aa3.4□□□□□ -1.86
RPN1YHR027C HEM1P09950 548 aaPredicted RBP3.4□□□□□ -1.86
RPN1YHR027C PHO84P25297 587 aaKnown RBP3.4□□□□□ -1.86
RPN1YHR027C PUF4P25339 888 aaKnown RBP RIP-Chip data3.4□□□□□ -1.86not detected
RPN1YHR027C MRF1P30775 413 aaPredicted RBP3.4□□□□□ -1.86
RPN1YHR027C YEL043WP32618 956 aa3.4□□□□□ -1.86
RPN1YHR027C PXL1P36166 706 aa3.4□□□□□ -1.86
RPN1YHR027C AXL1P40851 1208 aa3.4□□□□□ -1.86
RPN1YHR027C RSM24Q03976 319 aa3.4□□□□□ -1.86
RPN1YHR027C BRE1Q07457 700 aaKnown RBP3.4□□□□□ -1.86
RPN1YHR027C CLP1Q08685 445 aaPredicted RBP3.4□□□□□ -1.86
RPN1YHR027C TFC8Q12308 588 aa3.4□□□□□ -1.86
RPN1YHR027C YOL098CQ12496 1037 aa3.4□□□□□ -1.86
RPN1YHR027C URB1P34241 1764 aaKnown RBP3.4□□□□□ -1.86
RPN1YHR027C HSP78P33416 811 aa3.4□□□□□ -1.87
RPN1YHR027C DBP7P36120 742 aaKnown RBP3.4□□□□□ -1.87
RPN1YHR027C YBR242WP38331 238 aa3.4□□□□□ -1.87
RPN1YHR027C MPT5P39016 859 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
RPN1YHR027C MET10P39692 1035 aa3.4□□□□□ -1.87
RPN1YHR027C JJJ2P46997 583 aa3.4□□□□□ -1.87
RPN1YHR027C FMS1P50264 508 aa3.4□□□□□ -1.87
RPN1YHR027C RTS3P53289 263 aa3.4□□□□□ -1.87
RPN1YHR027C YPL109CQ02981 657 aa3.4□□□□□ -1.87
RPN1YHR027C WAR1Q03631 944 aa3.4□□□□□ -1.87
RPN1YHR027C MGR3Q04472 501 aa3.4□□□□□ -1.87
RPN1YHR027C YPQ2Q06328 317 aa3.4□□□□□ -1.87
RPN1YHR027C YCG1Q06680 1035 aa3.4□□□□□ -1.87
RPN1YHR027C YDL073WQ07454 984 aa3.4□□□□□ -1.87
RPN1YHR027C RSR1P13856 272 aa3.39□□□□□ -1.87
RPN1YHR027C SCJ1P25303 377 aa3.39□□□□□ -1.87
RPN1YHR027C PRD1P25375 712 aa3.39□□□□□ -1.87
RPN1YHR027C NPL6P32832 435 aa3.39□□□□□ -1.87
RPN1YHR027C STE5P32917 917 aa3.39□□□□□ -1.87
RPN1YHR027C YKL222CP35995 705 aa3.39□□□□□ -1.87
RPN1YHR027C CSE4P36012 229 aa3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 282.9 ms