RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W ULP1Q02724 621 aa6.85□□□□□ -1.31
VMA16YHR026W PKH1Q03407 766 aa6.85□□□□□ -1.31
VMA16YHR026W LCB5Q06147 687 aaKnown RBP6.85□□□□□ -1.31
VMA16YHR026W NGR1P32831 672 aaKnown RBP6.84□□□□□ -1.31
VMA16YHR026W MTC3P53077 123 aa6.84□□□□□ -1.31
VMA16YHR026W YRB30P53107 440 aaPredicted RBP6.84□□□□□ -1.31
VMA16YHR026W YNL165WP53891 406 aa6.84□□□□□ -1.31
VMA16YHR026W PUF6Q04373 656 aaKnown RBP6.84□□□□□ -1.31
VMA16YHR026W TY1A-DR3Q12441 440 aa6.84□□□□□ -1.31
VMA16YHR026W YPR117WQ06116 2489 aa6.83□□□□□ -1.32
VMA16YHR026W DAL1P32375 460 aa6.83□□□□□ -1.32
VMA16YHR026W SHM1P37292 490 aaPredicted RBP6.83□□□□□ -1.32
VMA16YHR026W AHP1P38013 176 aaKnown RBP6.83□□□□□ -1.32
VMA16YHR026W SPL2P38839 148 aa6.83□□□□□ -1.32
VMA16YHR026W PSF2P40359 213 aa6.83□□□□□ -1.32
VMA16YHR026W JJJ2P46997 583 aa6.83□□□□□ -1.32
VMA16YHR026W SCW11P53189 542 aa6.83□□□□□ -1.32
VMA16YHR026W EAR1Q03212 550 aa6.83□□□□□ -1.32
VMA16YHR026W SLA1P32790 1244 aa6.82□□□□□ -1.32
VMA16YHR026W GLY1P37303 387 aaKnown RBP6.82□□□□□ -1.32
VMA16YHR026W FCP1Q03254 732 aa6.82□□□□□ -1.32
VMA16YHR026W PNP1Q05788 311 aa6.82□□□□□ -1.32
VMA16YHR026W Q0182Q9ZZW1 134 aa6.82□□□□□ -1.32
VMA16YHR026W RPS7AP26786 190 aaKnown RBP6.81□□□□□ -1.32
VMA16YHR026W GIN4Q12263 1142 aa6.81□□□□□ -1.32
VMA16YHR026W TY1A-BLQ12266 440 aa6.81□□□□□ -1.32
VMA16YHR026W MCM1P11746 286 aa6.8□□□□□ -1.32
VMA16YHR026W SRS2P12954 1174 aa6.8□□□□□ -1.32
VMA16YHR026W MGM1P32266 881 aa6.8□□□□□ -1.32
VMA16YHR026W IRE1P32361 1115 aa6.8□□□□□ -1.32
VMA16YHR026W CDC3P32457 520 aaKnown RBP6.8□□□□□ -1.32
VMA16YHR026W OSH7P38755 437 aa6.8□□□□□ -1.32
VMA16YHR026W ZDS1P50111 915 aaKnown RBP6.8□□□□□ -1.32
VMA16YHR026W TOS4Q06266 489 aa6.8□□□□□ -1.32
VMA16YHR026W YDL144CQ07589 356 aa6.8□□□□□ -1.32
VMA16YHR026W ACK1Q07622 623 aaPredicted RBP6.8□□□□□ -1.32
VMA16YHR026W COQ4O13525 335 aa6.79□□□□□ -1.32
VMA16YHR026W RPS31P05759 152 aaKnown RBP6.79□□□□□ -1.32
VMA16YHR026W MLF3P32047 452 aa6.79□□□□□ -1.32
VMA16YHR026W VTC4P47075 721 aa6.79□□□□□ -1.32
VMA16YHR026W THI3Q07471 609 aa6.79□□□□□ -1.32
VMA16YHR026W BMS1Q08965 1183 aaKnown RBP6.79□□□□□ -1.32
VMA16YHR026W CDC19P00549 500 aaKnown RBP6.78□□□□□ -1.32
VMA16YHR026W PFK2P16862 959 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
VMA16YHR026W LDH1P38139 375 aa6.78□□□□□ -1.32
VMA16YHR026W YBR197CP38306 217 aa6.78□□□□□ -1.32
VMA16YHR026W HXT5P38695 592 aa6.78□□□□□ -1.32
VMA16YHR026W RRP46P53256 223 aaPredicted RBP6.78□□□□□ -1.32
VMA16YHR026W VPS62P53285 467 aa6.78□□□□□ -1.32
VMA16YHR026W DNM1P54861 757 aa6.78□□□□□ -1.32
VMA16YHR026W YMR084WA2P2R3 262 aa6.77□□□□□ -1.33
VMA16YHR026W LCB1P25045 558 aaKnown RBP6.77□□□□□ -1.33
VMA16YHR026W GBP2P25555 427 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
VMA16YHR026W ISC10P32645 267 aa6.77□□□□□ -1.33
VMA16YHR026W ERG7P38604 731 aa6.77□□□□□ -1.33
VMA16YHR026W MAM1P40065 302 aa6.77□□□□□ -1.33
VMA16YHR026W CAF120P53836 1060 aa6.77□□□□□ -1.33
VMA16YHR026W NAM8Q00539 523 aaKnown RBP6.77□□□□□ -1.33
VMA16YHR026W IRC4Q03036 179 aa6.77□□□□□ -1.33
VMA16YHR026W KAR5Q04746 504 aa6.77□□□□□ -1.33
VMA16YHR026W PPM2Q08282 695 aa6.77□□□□□ -1.33
VMA16YHR026W PSH1Q12161 406 aa6.77□□□□□ -1.33
VMA16YHR026W RVB2Q12464 471 aaKnown RBP6.77□□□□□ -1.33
VMA16YHR026W TAO3P40468 2376 aa6.76□□□□□ -1.33
VMA16YHR026W PDC6P26263 563 aaKnown RBP6.76□□□□□ -1.33
VMA16YHR026W RGA1P39083 1007 aa6.76□□□□□ -1.33
VMA16YHR026W BOL3P39724 118 aa6.76□□□□□ -1.33
VMA16YHR026W FIR1P40020 876 aa6.76□□□□□ -1.33
VMA16YHR026W ATG1P53104 897 aa6.76□□□□□ -1.33
VMA16YHR026W YOL057WQ08225 711 aa6.76□□□□□ -1.33
VMA16YHR026W WRS1Q12109 432 aaKnown RBP6.76□□□□□ -1.33
VMA16YHR026W WHI3P34761 661 aaKnown RBP6.75□□□□□ -1.33
VMA16YHR026W YBR287WP38355 427 aa6.75□□□□□ -1.33
VMA16YHR026W RTR1P40084 226 aaPredicted RBP6.75□□□□□ -1.33
VMA16YHR026W YTA6P40328 754 aa6.75□□□□□ -1.33
VMA16YHR026W YIR007WP40566 764 aa6.75□□□□□ -1.33
VMA16YHR026W NET1P47035 1189 aa6.75□□□□□ -1.33
VMA16YHR026W UBP15P50101 1230 aa6.75□□□□□ -1.33
VMA16YHR026W ADR1P07248 1323 aa6.75□□□□□ -1.33
VMA16YHR026W SWI1P09547 1314 aa6.75□□□□□ -1.33
VMA16YHR026W SAC3P46674 1301 aa6.75□□□□□ -1.33
VMA16YHR026W FUR4P05316 633 aaKnown RBP6.74□□□□□ -1.33
VMA16YHR026W SCD5P34758 872 aa6.74□□□□□ -1.33
VMA16YHR026W FPR3P38911 411 aaKnown RBP6.74□□□□□ -1.33
VMA16YHR026W ROG3P43602 733 aa6.74□□□□□ -1.33
VMA16YHR026W ECM30Q06673 1274 aa6.74□□□□□ -1.33
VMA16YHR026W PSF3Q12146 194 aa6.74□□□□□ -1.33
VMA16YHR026W SUI2P20459 304 aaKnown RBP6.73□□□□□ -1.33
VMA16YHR026W BOI1P38041 980 aaKnown RBP6.73□□□□□ -1.33
VMA16YHR026W KEL1P38853 1164 aaKnown RBP6.73□□□□□ -1.33
VMA16YHR026W MPP10P47083 593 aaKnown RBP6.73□□□□□ -1.33
VMA16YHR026W YJR008WP47085 338 aa6.73□□□□□ -1.33
VMA16YHR026W MTO1P53070 669 aa6.73□□□□□ -1.33
VMA16YHR026W ITC1P53125 1264 aa6.73□□□□□ -1.33
VMA16YHR026W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
VMA16YHR026W FLO1P32768 1537 aa6.72□□□□□ -1.33
VMA16YHR026W MRPL33P20084 86 aa6.72□□□□□ -1.33
VMA16YHR026W RAD53P22216 821 aa6.72□□□□□ -1.33
VMA16YHR026W PRD1P25375 712 aa6.72□□□□□ -1.33
VMA16YHR026W RRN6P32786 894 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms