RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TCD1	YHR003C	REV3	P14284	1504 aa		4.25	□□□□□ -1.73
TCD1	YHR003C	TCB3	Q03640	1545 aa	Known RBP	4.25	□□□□□ -1.73
TCD1	YHR003C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
TCD1	YHR003C	TAF13	P11747	167 aa		4.24	□□□□□ -1.73
TCD1	YHR003C	SEC23	P15303	768 aa	Known RBP	4.24	□□□□□ -1.73
TCD1	YHR003C	ATE1	P16639	503 aa		4.24	□□□□□ -1.73
TCD1	YHR003C	LIP5	P32875	414 aa		4.24	□□□□□ -1.73
TCD1	YHR003C	RDH54	P38086	958 aa		4.24	□□□□□ -1.73
TCD1	YHR003C	HSE1	P38753	452 aa		4.24	□□□□□ -1.73
TCD1	YHR003C	XKS1	P42826	600 aa		4.24	□□□□□ -1.73
TCD1	YHR003C	YJR107W	P47145	328 aa		4.24	□□□□□ -1.73
TCD1	YHR003C	RCM1	P53972	490 aa		4.24	□□□□□ -1.73
TCD1	YHR003C	RRP15	Q06511	250 aa	Predicted RBP	4.24	□□□□□ -1.73
TCD1	YHR003C	BRE4	Q07660	1125 aa		4.24	□□□□□ -1.73
TCD1	YHR003C	RAD2	P07276	1031 aa		4.23	□□□□□ -1.73
TCD1	YHR003C	PRE9	P23638	258 aa	Known RBP	4.23	□□□□□ -1.73
TCD1	YHR003C	ADD66	P36040	267 aa		4.23	□□□□□ -1.73
TCD1	YHR003C	CTH1	P47976	325 aa		4.23	□□□□□ -1.73
TCD1	YHR003C	RKM2	Q03942	479 aa		4.23	□□□□□ -1.73
TCD1	YHR003C	MAG2	Q06436	670 aa	Known RBP	4.23	□□□□□ -1.73
TCD1	YHR003C	CYC8	P14922	966 aa		4.22	□□□□□ -1.73
TCD1	YHR003C	RPS26A	P39938	119 aa	Known RBP	4.22	□□□□□ -1.73
TCD1	YHR003C	RPS26B	P39939	119 aa	Known RBP	4.22	□□□□□ -1.73
TCD1	YHR003C	PIC2	P40035	300 aa		4.22	□□□□□ -1.73
TCD1	YHR003C	OYE3	P41816	400 aa	Predicted RBP	4.22	□□□□□ -1.73
TCD1	YHR003C	GCD1	P09032	578 aa	Predicted RBP	4.21	□□□□□ -1.74
TCD1	YHR003C	HEM13	P11353	328 aa	Known RBP	4.21	□□□□□ -1.74
TCD1	YHR003C	RET1	P22276	1149 aa	Known RBP	4.21	□□□□□ -1.74
TCD1	YHR003C	EAR1	Q03212	550 aa		4.21	□□□□□ -1.74
TCD1	YHR003C	YLR257W	Q06146	321 aa	Known RBP	4.21	□□□□□ -1.74
TCD1	YHR003C	EST2	Q06163	884 aa		4.21	□□□□□ -1.74
TCD1	YHR003C	YVC1	Q12324	675 aa		4.21	□□□□□ -1.74
TCD1	YHR003C	MCM2	P29469	868 aa		4.2	□□□□□ -1.74
TCD1	YHR003C	VPS53	P47061	822 aa		4.2	□□□□□ -1.74
TCD1	YHR003C	YNR063W	P53749	607 aa		4.2	□□□□□ -1.74
TCD1	YHR003C	TPP1	Q03796	238 aa		4.2	□□□□□ -1.74
TCD1	YHR003C	RSA3	Q05942	220 aa	Known RBP	4.2	□□□□□ -1.74
TCD1	YHR003C	PUS7	Q08647	676 aa	Known RBP	4.2	□□□□□ -1.74
TCD1	YHR003C	HRK1	Q08732	759 aa	Known RBP	4.2	□□□□□ -1.74
TCD1	YHR003C	TRE1	Q08919	783 aa		4.2	□□□□□ -1.74
TCD1	YHR003C	AIM44	Q99299	758 aa		4.2	□□□□□ -1.74
TCD1	YHR003C	SEC8	P32855	1065 aa		4.19	□□□□□ -1.74
TCD1	YHR003C	ENT3	P47160	408 aa		4.19	□□□□□ -1.74
TCD1	YHR003C	SDH1	Q00711	640 aa		4.19	□□□□□ -1.74
TCD1	YHR003C	RMD1	Q03441	430 aa		4.19	□□□□□ -1.74
TCD1	YHR003C	ESF1	Q06344	628 aa	Known RBP	4.19	□□□□□ -1.74
TCD1	YHR003C	GLT1	Q12680	2145 aa	Known RBP	4.19	□□□□□ -1.74
TCD1	YHR003C	ADP1	P25371	1049 aa		4.18	□□□□□ -1.74
TCD1	YHR003C	QNS1	P38795	714 aa	Known RBP	4.18	□□□□□ -1.74
TCD1	YHR003C	FYV10	P40492	516 aa		4.18	□□□□□ -1.74
TCD1	YHR003C	SPR28	Q04921	423 aa		4.18	□□□□□ -1.74
TCD1	YHR003C	HDA2	Q06629	674 aa		4.18	□□□□□ -1.74
TCD1	YHR003C	MDS3	P53094	1487 aa		4.18	□□□□□ -1.74
TCD1	YHR003C	PEP7	P32609	515 aa		4.17	□□□□□ -1.74
TCD1	YHR003C	PEX7	P39108	375 aa		4.17	□□□□□ -1.74
TCD1	YHR003C	SIW14	P53965	281 aa		4.17	□□□□□ -1.74
TCD1	YHR003C	SSY1	Q03770	852 aa		4.17	□□□□□ -1.74
TCD1	YHR003C	DED1	P06634	604 aa	Known RBP	4.16	□□□□□ -1.74
TCD1	YHR003C	PRO1	P32264	428 aa		4.16	□□□□□ -1.74
TCD1	YHR003C	AFG2	P32794	780 aa		4.16	□□□□□ -1.74
TCD1	YHR003C	SEA4	P38164	1038 aa		4.16	□□□□□ -1.74
TCD1	YHR003C	YHL012W	P38709	493 aa		4.16	□□□□□ -1.74
TCD1	YHR003C	ORC3	P54790	616 aa		4.16	□□□□□ -1.74
TCD1	YHR003C	OYE2	Q03558	400 aa	Known RBP	4.16	□□□□□ -1.74
TCD1	YHR003C	MRL1	Q06815	381 aa		4.16	□□□□□ -1.74
TCD1	YHR003C	PTC5	Q12511	572 aa		4.16	□□□□□ -1.74
TCD1	YHR003C	GCR1	P07261	785 aa		4.15	□□□□□ -1.75
TCD1	YHR003C	MDL2	P33311	773 aa		4.15	□□□□□ -1.75
TCD1	YHR003C	HSP78	P33416	811 aa		4.15	□□□□□ -1.75
TCD1	YHR003C	PTC7	P38797	343 aa		4.15	□□□□□ -1.75
TCD1	YHR003C	NMD3	P38861	518 aa	Known RBP	4.15	□□□□□ -1.75
TCD1	YHR003C	YJL045W	P47052	634 aa		4.15	□□□□□ -1.75
TCD1	YHR003C	ROD1	Q02805	837 aa		4.15	□□□□□ -1.75
TCD1	YHR003C	SAM35	P14693	329 aa		4.14	□□□□□ -1.75
TCD1	YHR003C	SRO9	P25567	434 aa	Known RBP	4.14	□□□□□ -1.75
TCD1	YHR003C	KIP1	P28742	1111 aa		4.14	□□□□□ -1.75
TCD1	YHR003C	POL12	P38121	705 aa	Predicted RBP	4.14	□□□□□ -1.75
TCD1	YHR003C	ALG3	P38179	458 aa		4.14	□□□□□ -1.75
TCD1	YHR003C	HXT13	P39924	564 aa		4.14	□□□□□ -1.75
TCD1	YHR003C	AVT1	P47082	602 aa		4.14	□□□□□ -1.75
TCD1	YHR003C	ECL1	P48235	211 aa		4.14	□□□□□ -1.75
TCD1	YHR003C	GNP1	P48813	663 aa		4.14	□□□□□ -1.75
TCD1	YHR003C	HXT17	P53631	564 aa		4.14	□□□□□ -1.75
TCD1	YHR003C	HXT15	P54854	567 aa		4.14	□□□□□ -1.75
TCD1	YHR003C	RTT10	Q08924	1013 aa		4.14	□□□□□ -1.75
TCD1	YHR003C	NAP1	P25293	417 aa	Known RBP	4.13	□□□□□ -1.75
TCD1	YHR003C	RAD27	P26793	382 aa		4.13	□□□□□ -1.75
TCD1	YHR003C	MKK2	P32491	506 aa		4.13	□□□□□ -1.75
TCD1	YHR003C	YSC84	P32793	468 aa		4.13	□□□□□ -1.75
TCD1	YHR003C	GTS1	P40956	396 aa		4.13	□□□□□ -1.75
TCD1	YHR003C	YPL260W	Q08977	551 aa		4.13	□□□□□ -1.75
TCD1	YHR003C	DFG16	Q99234	619 aa		4.13	□□□□□ -1.75
TCD1	YHR003C	COQ4	O13525	335 aa		4.12	□□□□□ -1.75
TCD1	YHR003C	SYP1	P25623	870 aa	Known RBP	4.12	□□□□□ -1.75
TCD1	YHR003C	LRG1	P35688	1017 aa		4.12	□□□□□ -1.75
TCD1	YHR003C	IRC24	P40580	263 aa		4.12	□□□□□ -1.75
TCD1	YHR003C	RAT1	Q02792	1006 aa	Known RBP	4.12	□□□□□ -1.75
TCD1	YHR003C	TMA46	Q12000	345 aa	Known RBP	4.12	□□□□□ -1.75
TCD1	YHR003C	LPX1	Q12405	387 aa	Known RBP	4.12	□□□□□ -1.75
TCD1	YHR003C	BUD4	P47136	1447 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms