RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C UTP4Q06679 776 aaKnown RBP8.56□□□□□ -1.04
PUP2YGR253C NUC1P08466 329 aa8.55□□□□□ -1.04
PUP2YGR253C ANP1P32629 500 aa8.55□□□□□ -1.04
PUP2YGR253C SEC8P32855 1065 aa8.55□□□□□ -1.04
PUP2YGR253C RFC1P38630 861 aaKnown RBP8.55□□□□□ -1.04
PUP2YGR253C VPS72Q03388 795 aa8.55□□□□□ -1.04
PUP2YGR253C ISA1Q07821 250 aaPredicted RBP8.55□□□□□ -1.04
PUP2YGR253C UBR2Q07963 1872 aa8.54□□□□□ -1.04
PUP2YGR253C RPL8BP29453 256 aaKnown RBP8.54□□□□□ -1.04
PUP2YGR253C MYO3P36006 1272 aa8.54□□□□□ -1.04
PUP2YGR253C YHR131CP38835 850 aa8.54□□□□□ -1.04
PUP2YGR253C JHD1P40034 492 aa8.54□□□□□ -1.04
PUP2YGR253C FOL2P51601 243 aaKnown RBP8.54□□□□□ -1.04
PUP2YGR253C CDC16P09798 840 aa8.53□□□□□ -1.04
PUP2YGR253C RSC8P43609 557 aaKnown RBP8.53□□□□□ -1.04
PUP2YGR253C MCM6P53091 1017 aaKnown RBP8.53□□□□□ -1.04
PUP2YGR253C GUD1Q07729 489 aa8.53□□□□□ -1.04
PUP2YGR253C TFC8Q12308 588 aa8.53□□□□□ -1.04
PUP2YGR253C MAS2P11914 482 aa8.52□□□□□ -1.05
PUP2YGR253C POT1P27796 417 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
PUP2YGR253C PRS1P32895 427 aaKnown RBP8.52□□□□□ -1.05
PUP2YGR253C FLR1P38124 548 aa8.52□□□□□ -1.05
PUP2YGR253C NDT80P38830 627 aa8.52□□□□□ -1.05
PUP2YGR253C RPT6Q01939 405 aaKnown RBP8.52□□□□□ -1.05
PUP2YGR253C PHR1P05066 565 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
PUP2YGR253C HOP09932 586 aa8.51□□□□□ -1.05
PUP2YGR253C SGM1P47166 707 aa8.51□□□□□ -1.05
PUP2YGR253C LSB1P53281 241 aa8.51□□□□□ -1.05
PUP2YGR253C YNL115CP53925 644 aa8.51□□□□□ -1.05
PUP2YGR253C ESF1Q06344 628 aaKnown RBP8.51□□□□□ -1.05
PUP2YGR253C SSF2Q12153 453 aaPredicted RBP8.51□□□□□ -1.05
PUP2YGR253C CLF1Q12309 687 aaPredicted RBP8.51□□□□□ -1.05
PUP2YGR253C SNA3P14359 133 aa8.5□□□□□ -1.05
PUP2YGR253C DUR3P33413 735 aa8.5□□□□□ -1.05
PUP2YGR253C LIF1P53150 421 aa8.5□□□□□ -1.05
PUP2YGR253C HDA1P53973 706 aa8.5□□□□□ -1.05
PUP2YGR253C MYO1P08964 1928 aa8.49□□□□□ -1.05
PUP2YGR253C TY1B-AO13527 1196 aaKnown RBP8.49□□□□□ -1.05
PUP2YGR253C CAD1P24813 409 aaKnown RBP8.49□□□□□ -1.05
PUP2YGR253C CTR1P49573 406 aa8.49□□□□□ -1.05
PUP2YGR253C AZR1P50080 613 aa8.49□□□□□ -1.05
PUP2YGR253C FMS1P50264 508 aa8.49□□□□□ -1.05
PUP2YGR253C SPN1Q06505 410 aaPredicted RBP8.49□□□□□ -1.05
PUP2YGR253C SRP54P20424 541 aaKnown RBP8.48□□□□□ -1.05
PUP2YGR253C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
PUP2YGR253C MSC2Q03455 724 aa8.48□□□□□ -1.05
PUP2YGR253C MYO5Q04439 1219 aaKnown RBP8.48□□□□□ -1.05
PUP2YGR253C ATG11Q12527 1178 aa8.48□□□□□ -1.05
PUP2YGR253C MOT1P32333 1867 aa8.47□□□□□ -1.05
PUP2YGR253C MAK31P23059 88 aa8.47□□□□□ -1.05
PUP2YGR253C RER2P35196 286 aa8.47□□□□□ -1.05
PUP2YGR253C BRL1P38770 471 aa8.47□□□□□ -1.05
PUP2YGR253C CRG1P38892 291 aaRIP-Chip data8.47□□□□□ -1.05not detected
PUP2YGR253C RPS7BP48164 190 aaKnown RBP8.47□□□□□ -1.05
PUP2YGR253C PTA1Q01329 785 aaPredicted RBP8.47□□□□□ -1.05
PUP2YGR253C MDM1Q01846 1127 aa8.47□□□□□ -1.05
PUP2YGR253C NKP2Q06162 153 aa8.47□□□□□ -1.05
PUP2YGR253C YLR326WQ06170 240 aaKnown RBP8.47□□□□□ -1.05
PUP2YGR253C RIM20Q12033 661 aa8.47□□□□□ -1.05
PUP2YGR253C YLL058WQ12198 575 aa8.47□□□□□ -1.05
PUP2YGR253C SEC20P28791 383 aa8.46□□□□□ -1.06
PUP2YGR253C GUA1P38625 525 aaKnown RBP8.46□□□□□ -1.06
PUP2YGR253C ALD5P40047 520 aaKnown RBP8.46□□□□□ -1.06
PUP2YGR253C CSM2P40465 213 aa8.46□□□□□ -1.06
PUP2YGR253C INP51P40559 946 aaKnown RBP8.46□□□□□ -1.06
PUP2YGR253C SWI6P09959 803 aa8.45□□□□□ -1.06
PUP2YGR253C UGA4P32837 571 aa8.45□□□□□ -1.06
PUP2YGR253C POA1P38218 177 aa8.45□□□□□ -1.06
PUP2YGR253C TVP23P38962 199 aa8.45□□□□□ -1.06
PUP2YGR253C UBP15P50101 1230 aa8.45□□□□□ -1.06
PUP2YGR253C TPM2P40414 161 aa8.44□□□□□ -1.06
PUP2YGR253C YNR014WP53719 212 aa8.44□□□□□ -1.06
PUP2YGR253C ECM16Q04217 1267 aaKnown RBP8.44□□□□□ -1.06
PUP2YGR253C TFC6Q06339 672 aa8.44□□□□□ -1.06
PUP2YGR253C VAS1P07806 1104 aaKnown RBP8.43□□□□□ -1.06
PUP2YGR253C RPL8AP17076 256 aaKnown RBP8.43□□□□□ -1.06
PUP2YGR253C AFT1P22149 690 aa8.43□□□□□ -1.06
PUP2YGR253C PWP2P25635 923 aaKnown RBP8.43□□□□□ -1.06
PUP2YGR253C ALG2P43636 503 aa8.43□□□□□ -1.06
PUP2YGR253C YML020WQ03722 664 aa8.43□□□□□ -1.06
PUP2YGR253C VIP1Q06685 1146 aaKnown RBP8.43□□□□□ -1.06
PUP2YGR253C DSE3Q08729 430 aa8.43□□□□□ -1.06
PUP2YGR253C DAP1Q12091 152 aa8.43□□□□□ -1.06
PUP2YGR253C IMP2'P32351 346 aa8.42□□□□□ -1.06
PUP2YGR253C AAP1P37898 856 aaKnown RBP8.42□□□□□ -1.06
PUP2YGR253C FPR4Q06205 392 aaPredicted RBP8.42□□□□□ -1.06
PUP2YGR253C SPO74P45819 413 aa8.41□□□□□ -1.06
PUP2YGR253C EMI2Q04409 500 aaKnown RBP8.41□□□□□ -1.06
PUP2YGR253C SPT2P06843 333 aaPredicted RBP8.4□□□□□ -1.06
PUP2YGR253C FUB1P25659 250 aa8.4□□□□□ -1.06
PUP2YGR253C CIC1P38779 376 aaKnown RBP8.4□□□□□ -1.06
PUP2YGR253C PAN5P38787 379 aa8.4□□□□□ -1.06
PUP2YGR253C FMP10P40098 244 aa8.4□□□□□ -1.06
PUP2YGR253C TGL3P40308 642 aa8.4□□□□□ -1.06
PUP2YGR253C ASE1P50275 885 aa8.4□□□□□ -1.06
PUP2YGR253C SCY1P53009 804 aa8.4□□□□□ -1.06
PUP2YGR253C HUL5P53119 910 aa8.4□□□□□ -1.06
PUP2YGR253C YGR035CP53222 116 aa8.4□□□□□ -1.06
PUP2YGR253C EST2Q06163 884 aa8.4□□□□□ -1.06
PUP2YGR253C PGA3Q12746 312 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms