RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeastyeast

Gene SKI6, Length 741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKI6YGR195W UBX5Q06682 500 aa6.75□□□□□ -1.33
SKI6YGR195W GIN4Q12263 1142 aa6.75□□□□□ -1.33
SKI6YGR195W YIG1Q08956 461 aa6.74□□□□□ -1.33
SKI6YGR195W UTP22P53254 1237 aaPredicted RBP6.73□□□□□ -1.33
SKI6YGR195W EAR1Q03212 550 aa6.73□□□□□ -1.33
SKI6YGR195W JIP5Q06214 492 aaPredicted RBP6.73□□□□□ -1.33
SKI6YGR195W HXK1P04806 485 aaKnown RBP6.72□□□□□ -1.33
SKI6YGR195W UGA4P32837 571 aa6.72□□□□□ -1.33
SKI6YGR195W TSA1P34760 196 aaKnown RBP6.72□□□□□ -1.33
SKI6YGR195W OYE3P41816 400 aaPredicted RBP6.72□□□□□ -1.33
SKI6YGR195W YJR107WP47145 328 aa6.72□□□□□ -1.33
SKI6YGR195W ULP1Q02724 621 aa6.72□□□□□ -1.33
SKI6YGR195W NOG1Q02892 647 aaKnown RBP6.72□□□□□ -1.33
SKI6YGR195W OYE2Q03558 400 aaKnown RBP6.72□□□□□ -1.33
SKI6YGR195W ALG6Q12001 544 aaKnown RBP6.72□□□□□ -1.33
SKI6YGR195W TSR4P25040 408 aa6.71□□□□□ -1.34
SKI6YGR195W SRP40P32583 406 aaPredicted RBP6.71□□□□□ -1.34
SKI6YGR195W SHU2P38957 223 aa6.71□□□□□ -1.34
SKI6YGR195W FAA3P39002 694 aa6.71□□□□□ -1.34
SKI6YGR195W GIP4P39732 760 aa6.71□□□□□ -1.34
SKI6YGR195W GCV1P48015 400 aa6.71□□□□□ -1.34
SKI6YGR195W YGR122WP53272 402 aa6.71□□□□□ -1.34
SKI6YGR195W MEC3Q02574 474 aa6.71□□□□□ -1.34
SKI6YGR195W YKL077WP36081 392 aa6.7□□□□□ -1.34
SKI6YGR195W BUD21Q08492 214 aaPredicted RBP6.7□□□□□ -1.34
SKI6YGR195W YLL054CQ12244 843 aa6.7□□□□□ -1.34
SKI6YGR195W NSI1Q12457 570 aa6.7□□□□□ -1.34
SKI6YGR195W SEC8P32855 1065 aa6.69□□□□□ -1.34
SKI6YGR195W EXO5P38289 585 aa6.69□□□□□ -1.34
SKI6YGR195W YPL109CQ02981 657 aa6.69□□□□□ -1.34
SKI6YGR195W ADI1Q03677 179 aa6.69□□□□□ -1.34
SKI6YGR195W THI80P35202 319 aa6.68□□□□□ -1.34
SKI6YGR195W ARL1P38116 183 aaKnown RBP6.68□□□□□ -1.34
SKI6YGR195W TPO2P53283 614 aa6.68□□□□□ -1.34
SKI6YGR195W SSY1Q03770 852 aa6.68□□□□□ -1.34
SKI6YGR195W TY1A-LR4P0C2I8 440 aaKnown RBP6.67□□□□□ -1.34
SKI6YGR195W RPS4AP0CX35 261 aaKnown RBP6.67□□□□□ -1.34
SKI6YGR195W RPS4BP0CX36 261 aaKnown RBP6.67□□□□□ -1.34
SKI6YGR195W TY1A-DR6P0CX70 440 aa6.67□□□□□ -1.34
SKI6YGR195W TY1A-ER1P0CX71 440 aa6.67□□□□□ -1.34
SKI6YGR195W TY1A-LR2P0CX72 440 aa6.67□□□□□ -1.34
SKI6YGR195W TY1A-PLP0CX73 440 aa6.67□□□□□ -1.34
SKI6YGR195W TY1A-JR1P0CX74 440 aa6.67□□□□□ -1.34
SKI6YGR195W TY1A-LR3P0CX75 440 aa6.67□□□□□ -1.34
SKI6YGR195W TY1A-ML2P0CX76 440 aa6.67□□□□□ -1.34
SKI6YGR195W MCM2P29469 868 aa6.67□□□□□ -1.34
SKI6YGR195W NOP2P40991 618 aaKnown RBP6.67□□□□□ -1.34
SKI6YGR195W TY1A-GR1Q12085 440 aa6.67□□□□□ -1.34
SKI6YGR195W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.67□□□□□ -1.34
SKI6YGR195W TY1A-OLQ92392 440 aaKnown RBP6.67□□□□□ -1.34
SKI6YGR195W CYC8P14922 966 aa6.66□□□□□ -1.34
SKI6YGR195W MSH3P25336 1018 aa6.66□□□□□ -1.34
SKI6YGR195W YKL091CP33324 310 aaKnown RBP6.66□□□□□ -1.34
SKI6YGR195W SQT1P35184 431 aa6.66□□□□□ -1.34
SKI6YGR195W REI1P38344 393 aaPredicted RBP6.66□□□□□ -1.34
SKI6YGR195W RPS26AP39938 119 aaKnown RBP6.66□□□□□ -1.34
SKI6YGR195W RPS26BP39939 119 aaKnown RBP6.66□□□□□ -1.34
SKI6YGR195W MRPS18P42847 217 aa6.66□□□□□ -1.34
SKI6YGR195W RSM26P47141 266 aa6.66□□□□□ -1.34
SKI6YGR195W PEX13P80667 386 aa6.66□□□□□ -1.34
SKI6YGR195W MCD1Q12158 566 aa6.66□□□□□ -1.34
SKI6YGR195W RAD2P07276 1031 aa6.65□□□□□ -1.34
SKI6YGR195W PEX28P38848 579 aa6.65□□□□□ -1.34
SKI6YGR195W FYV10P40492 516 aa6.65□□□□□ -1.34
SKI6YGR195W POB3Q04636 552 aaKnown RBP6.65□□□□□ -1.34
SKI6YGR195W SSB1P11484 613 aaKnown RBP6.64□□□□□ -1.35
SKI6YGR195W PRE9P23638 258 aaKnown RBP6.64□□□□□ -1.35
SKI6YGR195W PIC2P40035 300 aa6.64□□□□□ -1.35
SKI6YGR195W SSB2P40150 613 aaKnown RBP6.64□□□□□ -1.35
SKI6YGR195W SLS1P42900 643 aa6.64□□□□□ -1.35
SKI6YGR195W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35not detected
SKI6YGR195W SPR28Q04921 423 aa6.64□□□□□ -1.35
SKI6YGR195W ADP1P25371 1049 aa6.63□□□□□ -1.35
SKI6YGR195W NEM1P38757 446 aa6.63□□□□□ -1.35
SKI6YGR195W VAC8P39968 578 aa6.63□□□□□ -1.35
SKI6YGR195W MSH4P40965 878 aaPredicted RBP6.63□□□□□ -1.35
SKI6YGR195W YGL140CP53120 1219 aa6.63□□□□□ -1.35
SKI6YGR195W ALG12P53730 551 aa6.63□□□□□ -1.35
SKI6YGR195W MDG1P53885 366 aa6.63□□□□□ -1.35
SKI6YGR195W VMA4P22203 233 aaKnown RBP6.62□□□□□ -1.35
SKI6YGR195W PRO1P32264 428 aa6.62□□□□□ -1.35
SKI6YGR195W RDH54P38086 958 aa6.62□□□□□ -1.35
SKI6YGR195W FLR1P38124 548 aa6.61□□□□□ -1.35
SKI6YGR195W AIM3P38266 947 aaKnown RBP6.61□□□□□ -1.35
SKI6YGR195W TPM2P40414 161 aa6.61□□□□□ -1.35
SKI6YGR195W MTR4P47047 1073 aaKnown RBP6.61□□□□□ -1.35
SKI6YGR195W YGL081WP53156 320 aa6.61□□□□□ -1.35
SKI6YGR195W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
SKI6YGR195W RMD1Q03441 430 aa6.61□□□□□ -1.35
SKI6YGR195W UTP5Q04177 643 aaKnown RBP6.61□□□□□ -1.35
SKI6YGR195W YOR059CQ08448 450 aaKnown RBP6.61□□□□□ -1.35
SKI6YGR195W TRE1Q08919 783 aa6.61□□□□□ -1.35
SKI6YGR195W CIT2P08679 460 aa6.6□□□□□ -1.35
SKI6YGR195W HEM13P11353 328 aaKnown RBP6.6□□□□□ -1.35
SKI6YGR195W SEC23P15303 768 aaKnown RBP6.6□□□□□ -1.35
SKI6YGR195W MAD1P40957 749 aa6.6□□□□□ -1.35
SKI6YGR195W YJL049WP47048 450 aa6.6□□□□□ -1.35
SKI6YGR195W YGR045CP53229 120 aa6.6□□□□□ -1.35
SKI6YGR195W LPX1Q12405 387 aaKnown RBP6.6□□□□□ -1.35
SKI6YGR195W MNN4P36044 1178 aa6.59□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms