RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C DBP5P20449 482 aaKnown RBP2.54□□□□□ -2
UBR1YGR184C BAS1P22035 811 aa2.54□□□□□ -2
UBR1YGR184C NMD3P38861 518 aaKnown RBP2.54□□□□□ -2
UBR1YGR184C RRP8P38961 392 aaKnown RBP2.54□□□□□ -2
UBR1YGR184C PIC2P40035 300 aa2.54□□□□□ -2
UBR1YGR184C TIM50Q02776 476 aa2.54□□□□□ -2
UBR1YGR184C TIF6Q12522 245 aaKnown RBP2.54□□□□□ -2
UBR1YGR184C UTP9P38882 575 aaKnown RBP2.54□□□□□ -2
UBR1YGR184C ESC2Q06340 456 aa2.54□□□□□ -2
UBR1YGR184C YLL058WQ12198 575 aa2.54□□□□□ -2
UBR1YGR184C TRP2P00899 507 aaKnown RBP2.53□□□□□ -2
UBR1YGR184C KIP2P28743 706 aa2.53□□□□□ -2
UBR1YGR184C DID4P36108 232 aa2.53□□□□□ -2
UBR1YGR184C PEX28P38848 579 aa2.53□□□□□ -2
UBR1YGR184C DAS1P47005 663 aa2.53□□□□□ -2
UBR1YGR184C PIP2P52960 996 aa2.53□□□□□ -2
UBR1YGR184C BUL2Q03758 920 aaKnown RBP2.53□□□□□ -2
UBR1YGR184C EAF1Q06337 982 aa2.53□□□□□ -2
UBR1YGR184C GNT1Q12096 491 aa2.53□□□□□ -2
UBR1YGR184C NYV1Q12255 253 aa2.53□□□□□ -2
UBR1YGR184C CDC31P06704 161 aaKnown RBP2.53□□□□□ -2
UBR1YGR184C PTC2P39966 464 aaKnown RBP2.53□□□□□ -2
UBR1YGR184C SPO71Q03868 1245 aa2.53□□□□□ -2
UBR1YGR184C MRL1Q06815 381 aa2.53□□□□□ -2
UBR1YGR184C YLR001CQ07895 862 aa2.53□□□□□ -2
UBR1YGR184C ERP4Q12450 207 aa2.53□□□□□ -2
UBR1YGR184C TMA17Q12513 150 aa2.53□□□□□ -2
UBR1YGR184C SPS1P08458 490 aa2.53□□□□□ -2
UBR1YGR184C ARE1P25628 610 aa2.53□□□□□ -2
UBR1YGR184C PEX5P35056 612 aa2.53□□□□□ -2
UBR1YGR184C YKR078WP36158 585 aaKnown RBP2.53□□□□□ -2
UBR1YGR184C YBR184WP38299 523 aa2.53□□□□□ -2
UBR1YGR184C RSM26P47141 266 aa2.53□□□□□ -2
UBR1YGR184C COG6P53959 839 aa2.53□□□□□ -2
UBR1YGR184C GCR1P07261 785 aa2.53□□□□□ -2
UBR1YGR184C SEC2P17065 759 aa2.53□□□□□ -2
UBR1YGR184C YKL050CP35736 922 aa2.53□□□□□ -2
UBR1YGR184C HXT13P39924 564 aa2.53□□□□□ -2
UBR1YGR184C SAP185P40856 1058 aa2.53□□□□□ -2
UBR1YGR184C HXT17P53631 564 aa2.53□□□□□ -2
UBR1YGR184C HXT15P54854 567 aa2.53□□□□□ -2
UBR1YGR184C YTM1Q12024 460 aaPredicted RBP2.53□□□□□ -2
UBR1YGR184C FAP7Q12055 197 aaPredicted RBP2.53□□□□□ -2
UBR1YGR184C IOC2Q12072 812 aa2.53□□□□□ -2
UBR1YGR184C APM4Q99186 491 aa2.53□□□□□ -2
UBR1YGR184C PHO81P17442 1178 aa2.53□□□□□ -2.01
UBR1YGR184C BDP1P46678 594 aa2.53□□□□□ -2.01
UBR1YGR184C PFD1P46988 109 aa2.53□□□□□ -2.01
UBR1YGR184C YGL140CP53120 1219 aa2.53□□□□□ -2.01
UBR1YGR184C SPC105P53148 917 aa2.53□□□□□ -2.01
UBR1YGR184C FRK1Q03002 865 aaPredicted RBP2.53□□□□□ -2.01
UBR1YGR184C HEH2Q03281 663 aa2.53□□□□□ -2.01
UBR1YGR184C TAF2P23255 1407 aa2.52□□□□□ -2.01
UBR1YGR184C AEP2P22136 580 aa2.52□□□□□ -2.01
UBR1YGR184C VBA5P36172 582 aa2.52□□□□□ -2.01
UBR1YGR184C DAM1P53267 343 aa2.52□□□□□ -2.01
UBR1YGR184C REH1Q06709 432 aa2.52□□□□□ -2.01
UBR1YGR184C YLL054CQ12244 843 aa2.52□□□□□ -2.01
UBR1YGR184C NPL6P32832 435 aa2.52□□□□□ -2.01
UBR1YGR184C YKL107WP34251 309 aa2.52□□□□□ -2.01
UBR1YGR184C YBR238CP38330 731 aaKnown RBP2.52□□□□□ -2.01
UBR1YGR184C QDR2P40474 542 aa2.52□□□□□ -2.01
UBR1YGR184C GZF3P42944 551 aaKnown RBP2.52□□□□□ -2.01
UBR1YGR184C ATG13Q06628 738 aa2.52□□□□□ -2.01
UBR1YGR184C YPL260WQ08977 551 aa2.52□□□□□ -2.01
UBR1YGR184C SFI1Q12369 946 aa2.52□□□□□ -2.01
UBR1YGR184C RAD53P22216 821 aa2.52□□□□□ -2.01
UBR1YGR184C STO1P34160 861 aaKnown RBP2.52□□□□□ -2.01
UBR1YGR184C RPN3P40016 523 aaKnown RBP2.52□□□□□ -2.01
UBR1YGR184C RRN7P40992 514 aa2.52□□□□□ -2.01
UBR1YGR184C XKS1P42826 600 aa2.52□□□□□ -2.01
UBR1YGR184C UBP6P43593 499 aaKnown RBP2.52□□□□□ -2.01
UBR1YGR184C RTA1P53047 317 aa2.52□□□□□ -2.01
UBR1YGR184C MDM1Q01846 1127 aa2.52□□□□□ -2.01
UBR1YGR184C MET14Q02196 202 aa2.52□□□□□ -2.01
UBR1YGR184C ATP25Q03153 612 aa2.52□□□□□ -2.01
UBR1YGR184C HIF1Q12373 385 aa2.52□□□□□ -2.01
UBR1YGR184C XRS2P33301 854 aa2.52□□□□□ -2.01
UBR1YGR184C AHP1P38013 176 aaKnown RBP2.52□□□□□ -2.01
UBR1YGR184C RAD26P40352 1085 aa2.52□□□□□ -2.01
UBR1YGR184C ENP2P48234 707 aaKnown RBP2.52□□□□□ -2.01
UBR1YGR184C CCM1P48237 864 aaPredicted RBP2.52□□□□□ -2.01
UBR1YGR184C SRP1Q02821 542 aaKnown RBP2.52□□□□□ -2.01
UBR1YGR184C SXM1Q04175 944 aaKnown RBP2.52□□□□□ -2.01
UBR1YGR184C YKL077WP36081 392 aa2.51□□□□□ -2.01
UBR1YGR184C PET10P36139 283 aa2.51□□□□□ -2.01
UBR1YGR184C HSV2P50079 448 aaPredicted RBP2.51□□□□□ -2.01
UBR1YGR184C MTO1P53070 669 aa2.51□□□□□ -2.01
UBR1YGR184C FOL1P53848 824 aa2.51□□□□□ -2.01
UBR1YGR184C RAT1Q02792 1006 aaKnown RBP2.51□□□□□ -2.01
UBR1YGR184C THI73Q07904 523 aa2.51□□□□□ -2.01
UBR1YGR184C NEW1Q08972 1196 aaKnown RBP2.51□□□□□ -2.01
UBR1YGR184C SCM3Q12334 223 aa2.51□□□□□ -2.01
UBR1YGR184C KCS1Q12494 1050 aa2.51□□□□□ -2.01
UBR1YGR184C FUS1P11710 512 aa2.51□□□□□ -2.01
UBR1YGR184C SYP1P25623 870 aaKnown RBP2.51□□□□□ -2.01
UBR1YGR184C HIR1P32479 840 aa2.51□□□□□ -2.01
UBR1YGR184C YKL100CP34248 587 aa2.51□□□□□ -2.01
UBR1YGR184C SSP120P39931 234 aaKnown RBP2.51□□□□□ -2.01
UBR1YGR184C YIL165CP40446 119 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms