RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C RGD2P43556 714 aa8.51□□□□□ -1.05
NUP57YGR119C IMH1Q06704 911 aaKnown RBP8.51□□□□□ -1.05
NUP57YGR119C URB1P34241 1764 aaKnown RBP8.5□□□□□ -1.05
NUP57YGR119C FKS3Q04952 1785 aa8.5□□□□□ -1.05
NUP57YGR119C KNS1P32350 737 aaPredicted RBP8.5□□□□□ -1.05
NUP57YGR119C UBP15P50101 1230 aa8.5□□□□□ -1.05
NUP57YGR119C OPT2Q06593 877 aa8.5□□□□□ -1.05
NUP57YGR119C AOS1Q06624 347 aa8.5□□□□□ -1.05
NUP57YGR119C ROM2P51862 1356 aaKnown RBP8.49□□□□□ -1.05
NUP57YGR119C NOT3P06102 836 aaKnown RBP8.49□□□□□ -1.05
NUP57YGR119C SEC8P32855 1065 aa8.49□□□□□ -1.05
NUP57YGR119C BRN1P38170 754 aa8.49□□□□□ -1.05
NUP57YGR119C NTA1P40354 457 aa8.49□□□□□ -1.05
NUP57YGR119C UBP2Q01476 1272 aa8.49□□□□□ -1.05
NUP57YGR119C LYS2P07702 1392 aa8.48□□□□□ -1.05
NUP57YGR119C NAB2P32505 525 aaKnown RBP RIP-Chip data8.48□□□□□ -1.05not detected
NUP57YGR119C RPT1P33299 467 aaKnown RBP8.48□□□□□ -1.05
NUP57YGR119C ISW1P38144 1129 aa8.48□□□□□ -1.05
NUP57YGR119C GIP1P38229 639 aa8.48□□□□□ -1.05
NUP57YGR119C YJR107WP47145 328 aa8.48□□□□□ -1.05
NUP57YGR119C OYE2Q03558 400 aaKnown RBP8.48□□□□□ -1.05
NUP57YGR119C YOR296WQ08748 1289 aa8.48□□□□□ -1.05
NUP57YGR119C TIF6Q12522 245 aaKnown RBP8.48□□□□□ -1.05
NUP57YGR119C RAD24P32641 659 aa8.47□□□□□ -1.05
NUP57YGR119C DAK2P43550 591 aa8.47□□□□□ -1.05
NUP57YGR119C CTF4Q01454 927 aa8.47□□□□□ -1.05
NUP57YGR119C CUS1Q02554 436 aaPredicted RBP8.47□□□□□ -1.05
NUP57YGR119C BSC2Q05611 235 aa8.47□□□□□ -1.05
NUP57YGR119C CDC19P00549 500 aaKnown RBP8.47□□□□□ -1.05
NUP57YGR119C CDC16P09798 840 aa8.47□□□□□ -1.05
NUP57YGR119C GCD6P32501 712 aaKnown RBP8.47□□□□□ -1.05
NUP57YGR119C GCD7P32502 381 aaPredicted RBP8.47□□□□□ -1.05
NUP57YGR119C RSC4Q02206 625 aa8.47□□□□□ -1.05
NUP57YGR119C YLR346CQ06139 101 aa8.47□□□□□ -1.05
NUP57YGR119C IRS4P36115 615 aaKnown RBP8.46□□□□□ -1.06
NUP57YGR119C MET1P36150 593 aa8.46□□□□□ -1.06
NUP57YGR119C HXT13P39924 564 aa8.46□□□□□ -1.06
NUP57YGR119C PSY2P40164 858 aa8.46□□□□□ -1.06
NUP57YGR119C TCB2P48231 1178 aa8.46□□□□□ -1.06
NUP57YGR119C YGR122WP53272 402 aa8.46□□□□□ -1.06
NUP57YGR119C RGP1P16664 663 aa8.45□□□□□ -1.06
NUP57YGR119C PRP45P28004 379 aaPredicted RBP8.45□□□□□ -1.06
NUP57YGR119C NSE3Q05541 303 aa8.45□□□□□ -1.06
NUP57YGR119C FYV10P40492 516 aa8.44□□□□□ -1.06
NUP57YGR119C SAM37P50110 327 aa8.44□□□□□ -1.06
NUP57YGR119C YOL057WQ08225 711 aa8.44□□□□□ -1.06
NUP57YGR119C MNN4P36044 1178 aa8.43□□□□□ -1.06
NUP57YGR119C NPA3P47122 385 aa8.43□□□□□ -1.06
NUP57YGR119C SKP1P52286 194 aa8.43□□□□□ -1.06
NUP57YGR119C HXT17P53631 564 aa8.43□□□□□ -1.06
NUP57YGR119C COG8Q04632 607 aa8.43□□□□□ -1.06
NUP57YGR119C NOC3Q07896 663 aaPredicted RBP8.43□□□□□ -1.06
NUP57YGR119C GLY1P37303 387 aaKnown RBP8.43□□□□□ -1.06
NUP57YGR119C OSH7P38755 437 aa8.43□□□□□ -1.06
NUP57YGR119C BOI2P39969 1040 aa8.43□□□□□ -1.06
NUP57YGR119C RNR2P09938 399 aaKnown RBP8.42□□□□□ -1.06
NUP57YGR119C MRP7P12687 371 aa8.42□□□□□ -1.06
NUP57YGR119C KCC4P25389 1037 aa8.42□□□□□ -1.06
NUP57YGR119C BDH2P39713 417 aa8.42□□□□□ -1.06
NUP57YGR119C SCW11P53189 542 aa8.42□□□□□ -1.06
NUP57YGR119C YDR306CQ06640 478 aa8.42□□□□□ -1.06
NUP57YGR119C SLM3Q12093 417 aa8.42□□□□□ -1.06
NUP57YGR119C TY1A-BLQ12266 440 aa8.42□□□□□ -1.06
NUP57YGR119C VPS35P34110 944 aa8.41□□□□□ -1.06
NUP57YGR119C MRPL16P38064 232 aa8.41□□□□□ -1.06
NUP57YGR119C CIC1P38779 376 aaKnown RBP8.41□□□□□ -1.06
NUP57YGR119C VPS20Q04272 221 aa8.41□□□□□ -1.06
NUP57YGR119C VAS1P07806 1104 aaKnown RBP8.4□□□□□ -1.06
NUP57YGR119C RAD4P14736 754 aa8.4□□□□□ -1.06
NUP57YGR119C AIM46P38885 310 aa8.4□□□□□ -1.06
NUP57YGR119C EMG1Q06287 252 aaKnown RBP8.4□□□□□ -1.06
NUP57YGR119C PRP5P21372 849 aaPredicted RBP8.4□□□□□ -1.07
NUP57YGR119C MCM2P29469 868 aa8.4□□□□□ -1.07
NUP57YGR119C SWC3P31376 625 aa8.4□□□□□ -1.07
NUP57YGR119C APM2P38700 605 aa8.4□□□□□ -1.07
NUP57YGR119C PIL1P53252 339 aaKnown RBP8.4□□□□□ -1.07
NUP57YGR119C HST1P53685 503 aa8.4□□□□□ -1.07
NUP57YGR119C NAM8Q00539 523 aaKnown RBP8.4□□□□□ -1.07
NUP57YGR119C SPR28Q04921 423 aa8.4□□□□□ -1.07
NUP57YGR119C INP54Q08227 384 aaKnown RBP8.4□□□□□ -1.07
NUP57YGR119C CIR1P42940 261 aa8.39□□□□□ -1.07
NUP57YGR119C CTR9P89105 1077 aa8.39□□□□□ -1.07
NUP57YGR119C LCD1Q04377 747 aa8.39□□□□□ -1.07
NUP57YGR119C DUR1,2P32528 1835 aaKnown RBP8.39□□□□□ -1.07
NUP57YGR119C YHL008CP38750 627 aa8.38□□□□□ -1.07
NUP57YGR119C RSC1P53236 928 aa8.38□□□□□ -1.07
NUP57YGR119C YNR040WP53736 256 aa8.38□□□□□ -1.07
NUP57YGR119C RKM3P38222 552 aa8.37□□□□□ -1.07
NUP57YGR119C YIL165CP40446 119 aa8.37□□□□□ -1.07
NUP57YGR119C HRQ1Q05549 1077 aa8.37□□□□□ -1.07
NUP57YGR119C TOS4Q06266 489 aa8.37□□□□□ -1.07
NUP57YGR119C OXR1Q08952 273 aa8.37□□□□□ -1.07
NUP57YGR119C RVS167P39743 482 aaKnown RBP8.36□□□□□ -1.07
NUP57YGR119C XKS1P42826 600 aa8.36□□□□□ -1.07
NUP57YGR119C YGL081WP53156 320 aa8.36□□□□□ -1.07
NUP57YGR119C LCB5Q06147 687 aaKnown RBP8.36□□□□□ -1.07
NUP57YGR119C BIK1P11709 440 aa8.36□□□□□ -1.07
NUP57YGR119C RPN12P32496 274 aa8.36□□□□□ -1.07
NUP57YGR119C NCL1P38205 684 aaKnown RBP8.36□□□□□ -1.07
NUP57YGR119C HYR1P40581 163 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms