RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W PXL1P36166 706 aa4.01□□□□□ -1.77
SPT6YGR116W KTR3P38130 404 aaPredicted RBP4.01□□□□□ -1.77
SPT6YGR116W RRP8P38961 392 aaKnown RBP4.01□□□□□ -1.77
SPT6YGR116W ADA2Q02336 434 aa4.01□□□□□ -1.77
SPT6YGR116W RMP1Q12530 201 aa4.01□□□□□ -1.77
SPT6YGR116W TPS3P38426 1054 aaKnown RBP4.01□□□□□ -1.77
SPT6YGR116W CRG1P38892 291 aaRIP-Chip data4.01□□□□□ -1.77 RIP-Chip
SPT6YGR116W YJR142WP47173 342 aa4.01□□□□□ -1.77
SPT6YGR116W GIR2Q03768 265 aaPredicted RBP4.01□□□□□ -1.77
SPT6YGR116W MTC5Q03897 1148 aa4.01□□□□□ -1.77
SPT6YGR116W RSA3Q05942 220 aaKnown RBP4.01□□□□□ -1.77
SPT6YGR116W RAD57P25301 460 aa4□□□□□ -1.77
SPT6YGR116W POB3Q04636 552 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W TAH18Q12181 623 aa4□□□□□ -1.77
SPT6YGR116W MCM3P24279 971 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W CDC3P32457 520 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W LAS1P36146 502 aaPredicted RBP4□□□□□ -1.77
SPT6YGR116W PTC4P38089 393 aa4□□□□□ -1.77
SPT6YGR116W TOM71P38825 639 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W SET1P38827 1080 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W KAP123P40069 1113 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W EPS1P40557 701 aa4□□□□□ -1.77
SPT6YGR116W SEC27P41811 889 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W VPS53P47061 822 aa4□□□□□ -1.77
SPT6YGR116W PIB2P53191 635 aa4□□□□□ -1.77
SPT6YGR116W GDE1Q02979 1223 aa4□□□□□ -1.77
SPT6YGR116W RMT2Q03305 412 aa4□□□□□ -1.77
SPT6YGR116W YMR114CQ04471 368 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W SSP2Q08646 371 aa4□□□□□ -1.77
SPT6YGR116W GET3Q12154 354 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W RRI2Q12348 645 aa4□□□□□ -1.77
SPT6YGR116W DAL7P21826 554 aa4□□□□□ -1.77
SPT6YGR116W HEK2P38199 381 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
SPT6YGR116W MIP6P38760 659 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W YJR039WP47107 1121 aa4□□□□□ -1.77
SPT6YGR116W ALD3P54114 506 aa4□□□□□ -1.77
SPT6YGR116W FAR8Q05040 523 aa4□□□□□ -1.77
SPT6YGR116W DPL1Q05567 589 aa4□□□□□ -1.77
SPT6YGR116W NKP1Q12493 238 aa4□□□□□ -1.77
SPT6YGR116W SPO12P17123 173 aa4□□□□□ -1.77
SPT6YGR116W URA1P28272 314 aaPredicted RBP4□□□□□ -1.77
SPT6YGR116W PSO2P30620 661 aa4□□□□□ -1.77
SPT6YGR116W SMY1P32364 656 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W YKR023WP36119 530 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W TIF4631P39935 952 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W TIF4632P39936 914 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W GPD2P41911 440 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W JJJ1P53863 590 aa4□□□□□ -1.77
SPT6YGR116W ECM23Q02710 187 aa4□□□□□ -1.77
SPT6YGR116W NGL3Q03210 505 aa4□□□□□ -1.77
SPT6YGR116W HOT1Q03213 719 aa4□□□□□ -1.77
SPT6YGR116W CSR1Q06705 408 aaKnown RBP4□□□□□ -1.77
SPT6YGR116W ZRT2Q12436 422 aa4□□□□□ -1.77
SPT6YGR116W CEX1Q12453 761 aa4□□□□□ -1.77
SPT6YGR116W RPS6AP0CX37 236 aaKnown RBP3.99□□□□□ -1.77
SPT6YGR116W RPS6BP0CX38 236 aaPredicted RBP3.99□□□□□ -1.77
SPT6YGR116W RPL5P26321 297 aaKnown RBP3.99□□□□□ -1.77
SPT6YGR116W SSE1P32589 693 aaKnown RBP3.99□□□□□ -1.77
SPT6YGR116W VFA1P40080 203 aa3.99□□□□□ -1.77
SPT6YGR116W GVP36P40531 326 aaKnown RBP3.99□□□□□ -1.77
SPT6YGR116W IAH1P41734 238 aa3.99□□□□□ -1.77
SPT6YGR116W BET4Q00618 327 aa3.99□□□□□ -1.77
SPT6YGR116W EBS1Q03466 884 aaKnown RBP3.99□□□□□ -1.77
SPT6YGR116W NOB1Q08444 459 aaKnown RBP3.99□□□□□ -1.77
SPT6YGR116W PIF1P07271 859 aa3.99□□□□□ -1.77
SPT6YGR116W KEX2P13134 814 aa3.99□□□□□ -1.77
SPT6YGR116W EXO84P38261 753 aa3.99□□□□□ -1.77
SPT6YGR116W FZO1P38297 855 aa3.99□□□□□ -1.77
SPT6YGR116W MPH1P40562 993 aa3.99□□□□□ -1.77
SPT6YGR116W ASI1P54074 624 aa3.99□□□□□ -1.77
SPT6YGR116W TFB2Q02939 513 aa3.99□□□□□ -1.77
SPT6YGR116W DAS2Q12084 232 aa3.99□□□□□ -1.77
SPT6YGR116W SLM3Q12093 417 aa3.99□□□□□ -1.77
SPT6YGR116W HIS4P00815 799 aaKnown RBP3.99□□□□□ -1.77
SPT6YGR116W PRP4P20053 465 aaKnown RBP3.99□□□□□ -1.77
SPT6YGR116W OAF3P36023 863 aa3.99□□□□□ -1.77
SPT6YGR116W AKR1P39010 764 aa3.99□□□□□ -1.77
SPT6YGR116W INA22P40576 216 aa3.99□□□□□ -1.77
SPT6YGR116W ERP6P53198 216 aa3.99□□□□□ -1.77
SPT6YGR116W YKU80Q04437 629 aa3.99□□□□□ -1.77
SPT6YGR116W HFD1Q04458 532 aa3.99□□□□□ -1.77
SPT6YGR116W YLR271WQ06152 274 aa3.99□□□□□ -1.77
SPT6YGR116W MMR1Q06324 491 aa3.99□□□□□ -1.77
SPT6YGR116W SPP382Q06411 708 aaPredicted RBP3.99□□□□□ -1.77
SPT6YGR116W TIP41Q12199 356 aa3.99□□□□□ -1.77
SPT6YGR116W RSF2P46974 1380 aa3.99□□□□□ -1.77
SPT6YGR116W SLA1P32790 1244 aa3.98□□□□□ -1.77
SPT6YGR116W RPC37P36121 282 aa3.98□□□□□ -1.77
SPT6YGR116W RCR1P38212 213 aa3.98□□□□□ -1.77
SPT6YGR116W PPX1P38698 397 aa3.98□□□□□ -1.77
SPT6YGR116W CCT2P39076 527 aaKnown RBP3.98□□□□□ -1.77
SPT6YGR116W XKS1P42826 600 aa3.98□□□□□ -1.77
SPT6YGR116W RPC17P47076 161 aa3.98□□□□□ -1.77
SPT6YGR116W YGR237CP50089 785 aa3.98□□□□□ -1.77
SPT6YGR116W CUS1Q02554 436 aaPredicted RBP3.98□□□□□ -1.77
SPT6YGR116W UME1Q03010 460 aa3.98□□□□□ -1.77
SPT6YGR116W INP2Q03824 705 aa3.98□□□□□ -1.77
SPT6YGR116W PSR2Q07949 397 aa3.98□□□□□ -1.77
SPT6YGR116W IES3Q12345 250 aa3.98□□□□□ -1.77
SPT6YGR116W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
Retrieved 100 of 5,963 RNA–protein pairs in 103.4 ms