RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W PET112P33893 541 aa3.14□□□□□ -1.91
SMD1YGR074W REI1P38344 393 aaPredicted RBP3.14□□□□□ -1.91
SMD1YGR074W ALT1P52893 592 aa3.14□□□□□ -1.91
SMD1YGR074W WRS1Q12109 432 aaKnown RBP3.14□□□□□ -1.91
SMD1YGR074W MCD1Q12158 566 aa3.14□□□□□ -1.91
SMD1YGR074W YVC1Q12324 675 aa3.14□□□□□ -1.91
SMD1YGR074W NPR1P22211 790 aa3.13□□□□□ -1.91
SMD1YGR074W SQT1P35184 431 aa3.13□□□□□ -1.91
SMD1YGR074W MNR2P35724 969 aa3.13□□□□□ -1.91
SMD1YGR074W NNK1P36003 928 aa3.13□□□□□ -1.91
SMD1YGR074W AIM3P38266 947 aaKnown RBP3.13□□□□□ -1.91
SMD1YGR074W PEX7P39108 375 aa3.13□□□□□ -1.91
SMD1YGR074W VAC8P39968 578 aa3.13□□□□□ -1.91
SMD1YGR074W RIM8P53179 542 aa3.13□□□□□ -1.91
SMD1YGR074W UTP22P53254 1237 aaPredicted RBP3.13□□□□□ -1.91
SMD1YGR074W MRPL22P53881 309 aa3.13□□□□□ -1.91
SMD1YGR074W YML122CQ03207 126 aa3.13□□□□□ -1.91
SMD1YGR074W FLP1P03870 423 aa3.12□□□□□ -1.91
SMD1YGR074W RAD2P07276 1031 aa3.12□□□□□ -1.91
SMD1YGR074W CYC8P14922 966 aa3.12□□□□□ -1.91
SMD1YGR074W SMY2P32909 740 aaKnown RBP3.12□□□□□ -1.91
SMD1YGR074W PRP40P33203 583 aaKnown RBP3.12□□□□□ -1.91
SMD1YGR074W PTC7P38797 343 aa3.12□□□□□ -1.91
SMD1YGR074W RVS167P39743 482 aaKnown RBP3.12□□□□□ -1.91
SMD1YGR074W AVO1Q08236 1176 aa3.12□□□□□ -1.91
SMD1YGR074W ALG6Q12001 544 aaKnown RBP3.12□□□□□ -1.91
SMD1YGR074W LPX1Q12405 387 aaKnown RBP3.12□□□□□ -1.91
SMD1YGR074W MCM5P29496 775 aaKnown RBP3.11□□□□□ -1.91
SMD1YGR074W ATG14P38270 344 aa3.11□□□□□ -1.91
SMD1YGR074W SHU2P38957 223 aa3.11□□□□□ -1.91
SMD1YGR074W KRI1P42846 591 aaKnown RBP3.11□□□□□ -1.91
SMD1YGR074W RSM26P47141 266 aa3.11□□□□□ -1.91
SMD1YGR074W FOL2P51601 243 aaKnown RBP3.11□□□□□ -1.91
SMD1YGR074W MON1P53129 644 aa3.11□□□□□ -1.91
SMD1YGR074W ALD6P54115 500 aaKnown RBP3.11□□□□□ -1.91
SMD1YGR074W CTR9P89105 1077 aa3.11□□□□□ -1.91
SMD1YGR074W EAR1Q03212 550 aa3.11□□□□□ -1.91
SMD1YGR074W PMT7Q06644 662 aa3.11□□□□□ -1.91
SMD1YGR074W PIN2Q12057 282 aa3.11□□□□□ -1.91
SMD1YGR074W PNS1Q12412 539 aa3.11□□□□□ -1.91
SMD1YGR074W YTA7P40340 1379 aa3.11□□□□□ -1.91
SMD1YGR074W SOD2P00447 233 aa3.1□□□□□ -1.91
SMD1YGR074W HXK1P04806 485 aaKnown RBP3.1□□□□□ -1.91
SMD1YGR074W PRP5P21372 849 aaPredicted RBP3.1□□□□□ -1.91
SMD1YGR074W RAD27P26793 382 aa3.1□□□□□ -1.91
SMD1YGR074W SRP40P32583 406 aaPredicted RBP3.1□□□□□ -1.91
SMD1YGR074W ABZ1P37254 787 aaPredicted RBP3.1□□□□□ -1.91
SMD1YGR074W RIM11P38615 370 aa3.1□□□□□ -1.91
SMD1YGR074W GTS1P40956 396 aa3.1□□□□□ -1.91
SMD1YGR074W OSW7P43611 510 aa3.1□□□□□ -1.91
SMD1YGR074W NUT1P53114 1132 aa3.1□□□□□ -1.91
SMD1YGR074W ELA1P53861 379 aaPredicted RBP3.1□□□□□ -1.91
SMD1YGR074W ORC1P54784 914 aaPredicted RBP3.1□□□□□ -1.91
SMD1YGR074W VPS16Q03308 798 aa3.1□□□□□ -1.91
SMD1YGR074W FPR4Q06205 392 aaPredicted RBP3.1□□□□□ -1.91
SMD1YGR074W CMR1Q12510 522 aaKnown RBP3.1□□□□□ -1.91
SMD1YGR074W ARL1P38116 183 aaKnown RBP3.09□□□□□ -1.91
SMD1YGR074W OCA5P38738 679 aa3.09□□□□□ -1.91
SMD1YGR074W FAA3P39002 694 aa3.09□□□□□ -1.91
SMD1YGR074W YJL049WP47048 450 aa3.09□□□□□ -1.91
SMD1YGR074W YGR045CP53229 120 aa3.09□□□□□ -1.91
SMD1YGR074W ULP1Q02724 621 aa3.09□□□□□ -1.91
SMD1YGR074W ADI1Q03677 179 aa3.09□□□□□ -1.91
SMD1YGR074W YLR358CO13565 187 aa3.08□□□□□ -1.92
SMD1YGR074W TOD6P34219 525 aa3.08□□□□□ -1.92
SMD1YGR074W YKL077WP36081 392 aa3.08□□□□□ -1.92
SMD1YGR074W SNO2P53823 222 aa3.08□□□□□ -1.92
SMD1YGR074W GDE1Q02979 1223 aa3.08□□□□□ -1.92
SMD1YGR074W YPL109CQ02981 657 aa3.08□□□□□ -1.92
SMD1YGR074W TMA46Q12000 345 aaKnown RBP3.08□□□□□ -1.92
SMD1YGR074W YOR131CQ12486 218 aa3.08□□□□□ -1.92
SMD1YGR074W YOL098CQ12496 1037 aa3.08□□□□□ -1.92
SMD1YGR074W RPS13P05756 151 aaKnown RBP3.07□□□□□ -1.92
SMD1YGR074W CDC34P14682 295 aa3.07□□□□□ -1.92
SMD1YGR074W ETP1P38748 585 aaKnown RBP3.07□□□□□ -1.92
SMD1YGR074W PEX13P80667 386 aa3.07□□□□□ -1.92
SMD1YGR074W TPP1Q03796 238 aa3.07□□□□□ -1.92
SMD1YGR074W MRL1Q06815 381 aa3.07□□□□□ -1.92
SMD1YGR074W PUS7Q08647 676 aaKnown RBP3.07□□□□□ -1.92
SMD1YGR074W RTT10Q08924 1013 aa3.07□□□□□ -1.92
SMD1YGR074W YPL277CQ08989 487 aa3.07□□□□□ -1.92
SMD1YGR074W COBP00163 385 aa3.06□□□□□ -1.92
SMD1YGR074W TUB2P02557 457 aaKnown RBP3.06□□□□□ -1.92
SMD1YGR074W YKL091CP33324 310 aaKnown RBP3.06□□□□□ -1.92
SMD1YGR074W YAF9P53930 226 aa3.06□□□□□ -1.92
SMD1YGR074W YOR352WQ08816 343 aa3.06□□□□□ -1.92
SMD1YGR074W FAL1Q12099 399 aaKnown RBP3.06□□□□□ -1.92
SMD1YGR074W YDL177CQ12257 170 aa3.06□□□□□ -1.92
SMD1YGR074W TAF13P11747 167 aa3.05□□□□□ -1.92
SMD1YGR074W UGA4P32837 571 aa3.05□□□□□ -1.92
SMD1YGR074W PEX28P38848 579 aa3.05□□□□□ -1.92
SMD1YGR074W SNF7P39929 240 aaKnown RBP3.05□□□□□ -1.92
SMD1YGR074W SAP155P43612 1002 aa3.05□□□□□ -1.92
SMD1YGR074W SPO20Q04359 397 aa3.05□□□□□ -1.92
SMD1YGR074W TOS4Q06266 489 aa3.05□□□□□ -1.92
SMD1YGR074W CDC53Q12018 815 aaKnown RBP3.05□□□□□ -1.92
SMD1YGR074W SSF2Q12153 453 aaPredicted RBP3.05□□□□□ -1.92
SMD1YGR074W GCR1P07261 785 aa3.04□□□□□ -1.92
SMD1YGR074W STI1P15705 589 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
SMD1YGR074W PRI2P20457 528 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 92.8 ms