RNA–Protein interactions for RNA: YGL220W

FRA2, Transcript of Protein involved in negative regulation of iron regulon transcription, yeast

Gene FRA2, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRA2	YGL220W	NOC3	Q07896	663 aa	Predicted RBP	5.72	□□□□□ -1.49
FRA2	YGL220W	PUS1	Q12211	544 aa	Known RBP	5.72	□□□□□ -1.49
FRA2	YGL220W	EDE1	P34216	1381 aa		5.71	□□□□□ -1.5
FRA2	YGL220W	CCP1	P00431	361 aa		5.71	□□□□□ -1.5
FRA2	YGL220W	TPM2	P40414	161 aa		5.71	□□□□□ -1.5
FRA2	YGL220W	DOT5	P40553	215 aa		5.71	□□□□□ -1.5
FRA2	YGL220W	MRPS18	P42847	217 aa		5.71	□□□□□ -1.5
FRA2	YGL220W	RPN11	P43588	306 aa	Known RBP	5.71	□□□□□ -1.5
FRA2	YGL220W	YJL181W	P46987	611 aa		5.71	□□□□□ -1.5
FRA2	YGL220W	YJR142W	P47173	342 aa		5.71	□□□□□ -1.5
FRA2	YGL220W	PHM7	Q12252	991 aa		5.71	□□□□□ -1.5
FRA2	YGL220W	YRF1-4	O13559	1382 aa		5.7	□□□□□ -1.5
FRA2	YGL220W	HXK1	P04806	485 aa	Known RBP	5.7	□□□□□ -1.5
FRA2	YGL220W	RAD4	P14736	754 aa		5.7	□□□□□ -1.5
FRA2	YGL220W	DLD1	P32891	587 aa		5.7	□□□□□ -1.5
FRA2	YGL220W	SMC1	P32908	1225 aa		5.7	□□□□□ -1.5
FRA2	YGL220W	YKL133C	P36066	463 aa		5.7	□□□□□ -1.5
FRA2	YGL220W	YHL008C	P38750	627 aa		5.7	□□□□□ -1.5
FRA2	YGL220W	TAT2	P38967	592 aa		5.7	□□□□□ -1.5
FRA2	YGL220W	UBP12	P39538	1254 aa		5.7	□□□□□ -1.5
FRA2	YGL220W	NAN1	Q02931	896 aa	Known RBP	5.7	□□□□□ -1.5
FRA2	YGL220W	TDA5	Q06417	326 aa	Known RBP	5.7	□□□□□ -1.5
FRA2	YGL220W	SNF2	P22082	1703 aa		5.7	□□□□□ -1.5
FRA2	YGL220W	YRF1-3	P0CX14	1859 aa		5.69	□□□□□ -1.5
FRA2	YGL220W	YRF1-7	P0CX15	1859 aa		5.69	□□□□□ -1.5
FRA2	YGL220W	YRF1-6	P53819	1859 aa		5.69	□□□□□ -1.5
FRA2	YGL220W	PHO8	P11491	566 aa		5.69	□□□□□ -1.5
FRA2	YGL220W	PRP40	P33203	583 aa	Known RBP	5.69	□□□□□ -1.5
FRA2	YGL220W	TIM54	P47045	478 aa		5.69	□□□□□ -1.5
FRA2	YGL220W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
FRA2	YGL220W	JJJ3	P47138	172 aa		5.69	□□□□□ -1.5
FRA2	YGL220W	RSC4	Q02206	625 aa		5.69	□□□□□ -1.5
FRA2	YGL220W	YOL057W	Q08225	711 aa		5.69	□□□□□ -1.5
FRA2	YGL220W	MCD1	Q12158	566 aa		5.69	□□□□□ -1.5
FRA2	YGL220W	DAT1	P13483	248 aa	Known RBP	5.68	□□□□□ -1.5
FRA2	YGL220W	GRX7	P38068	203 aa		5.68	□□□□□ -1.5
FRA2	YGL220W	TPO2	P53283	614 aa		5.68	□□□□□ -1.5
FRA2	YGL220W	PDS5	Q04264	1277 aa		5.68	□□□□□ -1.5
FRA2	YGL220W	OPI10	Q08202	246 aa		5.68	□□□□□ -1.5
FRA2	YGL220W	YLR125W	Q12138	136 aa		5.68	□□□□□ -1.5
FRA2	YGL220W	SEC3	P33332	1336 aa	Known RBP	5.68	□□□□□ -1.5
FRA2	YGL220W	SIR4	P11978	1358 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	COB	P00163	385 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	CDC34	P14682	295 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	KAR2	P16474	682 aa	Known RBP	5.67	□□□□□ -1.5
FRA2	YGL220W	PRI2	P20457	528 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	UTR2	P32623	467 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	TBS1	P38114	1094 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	PMC1	P38929	1173 aa	Predicted RBP	5.67	□□□□□ -1.5
FRA2	YGL220W	YEN1	P40028	759 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	LSB3	P43603	459 aa	Known RBP	5.67	□□□□□ -1.5
FRA2	YGL220W	FAA4	P47912	694 aa	Known RBP	5.67	□□□□□ -1.5
FRA2	YGL220W	DAL4	Q04895	635 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	BSC2	Q05611	235 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	TOS4	Q06266	489 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	PPM2	Q08282	695 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	AUS1	Q08409	1394 aa		5.67	□□□□□ -1.5
FRA2	YGL220W	RIM15	P43565	1770 aa		5.66	□□□□□ -1.5
FRA2	YGL220W	YEF3	P16521	1044 aa	Known RBP	5.66	□□□□□ -1.5
FRA2	YGL220W	MRPL33	P20084	86 aa		5.66	□□□□□ -1.5
FRA2	YGL220W	SRM1	P21827	482 aa		5.66	□□□□□ -1.5
FRA2	YGL220W	PRE9	P23638	258 aa	Known RBP	5.66	□□□□□ -1.5
FRA2	YGL220W	THI4	P32318	326 aa		5.66	□□□□□ -1.5
FRA2	YGL220W	CRP1	P38845	465 aa	Known RBP	5.66	□□□□□ -1.5
FRA2	YGL220W	FAA3	P39002	694 aa		5.66	□□□□□ -1.5
FRA2	YGL220W	SPF1	P39986	1215 aa	Known RBP	5.66	□□□□□ -1.5
FRA2	YGL220W	HXT8	P40886	569 aa		5.66	□□□□□ -1.5
FRA2	YGL220W	YGR053C	P53234	283 aa		5.66	□□□□□ -1.5
FRA2	YGL220W	MEC3	Q02574	474 aa		5.66	□□□□□ -1.5
FRA2	YGL220W	TIM23	P32897	222 aa		5.65	□□□□□ -1.5
FRA2	YGL220W	TYW3	P53177	273 aa		5.65	□□□□□ -1.5
FRA2	YGL220W	DNM1	P54861	757 aa		5.65	□□□□□ -1.5
FRA2	YGL220W	ISU1	Q03020	165 aa		5.65	□□□□□ -1.5
FRA2	YGL220W	TAP42	Q04372	366 aa		5.65	□□□□□ -1.5
FRA2	YGL220W	YCS4	Q06156	1176 aa		5.65	□□□□□ -1.5
FRA2	YGL220W	KTR2	P33550	425 aa		5.64	□□□□□ -1.51
FRA2	YGL220W	MKS1	P34072	584 aa		5.64	□□□□□ -1.51
FRA2	YGL220W	HXT5	P38695	592 aa		5.64	□□□□□ -1.51
FRA2	YGL220W	NPR2	P39923	615 aa		5.64	□□□□□ -1.51
FRA2	YGL220W	HIM1	Q06674	414 aa		5.64	□□□□□ -1.51
FRA2	YGL220W	INP54	Q08227	384 aa	Known RBP	5.64	□□□□□ -1.51
FRA2	YGL220W	FLC1	Q08967	793 aa		5.64	□□□□□ -1.51
FRA2	YGL220W	GIN4	Q12263	1142 aa		5.64	□□□□□ -1.51
FRA2	YGL220W	YKR075C	P36155	307 aa		5.63	□□□□□ -1.51
FRA2	YGL220W	RSP5	P39940	809 aa	Known RBP	5.63	□□□□□ -1.51
FRA2	YGL220W	VTC4	P47075	721 aa		5.63	□□□□□ -1.51
FRA2	YGL220W	LYS4	P49367	693 aa	Predicted RBP	5.63	□□□□□ -1.51
FRA2	YGL220W	PAP2	P53632	584 aa	Known RBP	5.63	□□□□□ -1.51
FRA2	YGL220W	ADE16	P54113	591 aa	Known RBP	5.63	□□□□□ -1.51
FRA2	YGL220W	ATG13	Q06628	738 aa		5.63	□□□□□ -1.51
FRA2	YGL220W	SPO75	Q07798	868 aa		5.63	□□□□□ -1.51
FRA2	YGL220W	NOP14	Q99207	810 aa	Known RBP	5.63	□□□□□ -1.51
FRA2	YGL220W	RPO41	P13433	1351 aa	Known RBP	5.63	□□□□□ -1.51
FRA2	YGL220W	CDC19	P00549	500 aa	Known RBP	5.62	□□□□□ -1.51
FRA2	YGL220W	RPP2B	P02400	110 aa	Known RBP	5.62	□□□□□ -1.51
FRA2	YGL220W	VMA3	P25515	160 aa		5.62	□□□□□ -1.51
FRA2	YGL220W	SCD5	P34758	872 aa		5.62	□□□□□ -1.51
FRA2	YGL220W	UGA2	P38067	497 aa		5.62	□□□□□ -1.51
FRA2	YGL220W	LDH1	P38139	375 aa		5.62	□□□□□ -1.51
FRA2	YGL220W	GGA2	P38817	585 aa	Known RBP	5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms