RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTR3	YFR029W	UME1	Q03010	460 aa		4.81	□□□□□ -1.64
PTR3	YFR029W	REH1	Q06709	432 aa		4.81	□□□□□ -1.64
PTR3	YFR029W	INP54	Q08227	384 aa	Known RBP	4.81	□□□□□ -1.64
PTR3	YFR029W	YDR056C	Q12025	205 aa		4.81	□□□□□ -1.64
PTR3	YFR029W	NUP145	P49687	1317 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	COB	P00163	385 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	NAT1	P12945	854 aa	Known RBP	4.8	□□□□□ -1.64
PTR3	YFR029W	MEF1	P25039	761 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	STO1	P34160	861 aa	Known RBP	4.8	□□□□□ -1.64
PTR3	YFR029W	DOT6	P40059	670 aa	Known RBP	4.8	□□□□□ -1.64
PTR3	YFR029W	MNT3	P40549	630 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	EMW1	P42842	904 aa	Known RBP	4.8	□□□□□ -1.64
PTR3	YFR029W	KXD1	P53158	218 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	YGR016W	P53209	190 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	SRP1	Q02821	542 aa	Known RBP	4.8	□□□□□ -1.64
PTR3	YFR029W	TAF8	Q03750	510 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	YCS4	Q06156	1176 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	YLR001C	Q07895	862 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	CDC45	Q08032	650 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	FAL1	Q12099	399 aa	Known RBP	4.8	□□□□□ -1.64
PTR3	YFR029W	FLP1	P03870	423 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	MCM1	P11746	286 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	TPM1	P17536	199 aa	Known RBP	4.8	□□□□□ -1.64
PTR3	YFR029W	BAS1	P22035	811 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	GFD2	P25370	566 aa	Known RBP	4.8	□□□□□ -1.64
PTR3	YFR029W	BRF1	P29056	596 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	MCM10	P32354	571 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	MRS6	P32864	603 aa	Known RBP	4.8	□□□□□ -1.64
PTR3	YFR029W	SMC1	P32908	1225 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	HSP78	P33416	811 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	NTA1	P40354	457 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	PMT3	P47190	753 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	YNL193W	P53870	558 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	ISU1	Q03020	165 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	FMP25	Q08023	583 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	SSP2	Q08646	371 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	YPR015C	Q12531	247 aa		4.8	□□□□□ -1.64
PTR3	YFR029W	DBF20	P32328	564 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	DUR3	P33413	735 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	SPT23	P35210	1082 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	YJR115W	P47152	169 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	PRP43	P53131	767 aa	Known RBP	4.79	□□□□□ -1.64
PTR3	YFR029W	RTT10	Q08924	1013 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	TIF6	Q12522	245 aa	Known RBP	4.79	□□□□□ -1.64
PTR3	YFR029W	KIP2	P28743	706 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	ANP1	P32629	500 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	JNM1	P36224	373 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	KTR4	P38131	464 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	RXT2	P38255	430 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	RRN7	P40992	514 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	BFA1	P47113	574 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	SRB7	P47822	140 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	ULP1	Q02724	621 aa		4.79	□□□□□ -1.64
PTR3	YFR029W	HSP60	P19882	572 aa	Known RBP	4.78	□□□□□ -1.64
PTR3	YFR029W	SEA4	P38164	1038 aa		4.78	□□□□□ -1.64
PTR3	YFR029W	ALA1	P40825	983 aa	Known RBP	4.78	□□□□□ -1.64
PTR3	YFR029W	SEC26	P41810	973 aa	Known RBP	4.78	□□□□□ -1.64
PTR3	YFR029W	UGO1	Q03327	502 aa		4.78	□□□□□ -1.64
PTR3	YFR029W	ADI1	Q03677	179 aa		4.78	□□□□□ -1.64
PTR3	YFR029W	RRP9	Q06506	573 aa	Known RBP	4.78	□□□□□ -1.64
PTR3	YFR029W	FAP7	Q12055	197 aa	Predicted RBP	4.78	□□□□□ -1.64
PTR3	YFR029W	MED1	Q12321	566 aa		4.78	□□□□□ -1.64
PTR3	YFR029W	MSN1	P22148	382 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	UTR2	P32623	467 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	RRN3	P36070	627 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	TRZ1	P36159	838 aa	Predicted RBP	4.77	□□□□□ -1.65
PTR3	YFR029W	GGA2	P38817	585 aa	Known RBP	4.77	□□□□□ -1.65
PTR3	YFR029W	HXT13	P39924	564 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	RSC8	P43609	557 aa	Known RBP	4.77	□□□□□ -1.65
PTR3	YFR029W	HXT17	P53631	564 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	HXT15	P54854	567 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	PRP3	Q03338	469 aa	Predicted RBP	4.77	□□□□□ -1.65
PTR3	YFR029W	VTI1	Q04338	217 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	YDR286C	Q05530	114 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	YLR352W	Q06479	807 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	HEM13	P11353	328 aa	Known RBP	4.77	□□□□□ -1.65
PTR3	YFR029W	VPH1	P32563	840 aa	Known RBP	4.77	□□□□□ -1.65
PTR3	YFR029W	SCD5	P34758	872 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	YHL041W	P38730	149 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	RAD55	P38953	406 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	VTC2	P43585	828 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	HSV2	P50079	448 aa	Predicted RBP	4.77	□□□□□ -1.65
PTR3	YFR029W	YNL165W	P53891	406 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	PUS1	Q12211	544 aa	Known RBP	4.77	□□□□□ -1.65
PTR3	YFR029W	OSH2	Q12451	1283 aa		4.77	□□□□□ -1.65
PTR3	YFR029W	QCR6	P00127	147 aa		4.76	□□□□□ -1.65
PTR3	YFR029W	MSM1	P22438	575 aa		4.76	□□□□□ -1.65
PTR3	YFR029W	AGP1	P25376	633 aa		4.76	□□□□□ -1.65
PTR3	YFR029W	PTP2	P29461	750 aa		4.76	□□□□□ -1.65
PTR3	YFR029W	FBP26	P32604	452 aa		4.76	□□□□□ -1.65
PTR3	YFR029W	GPP2	P40106	250 aa	Known RBP	4.76	□□□□□ -1.65
PTR3	YFR029W	PSY2	P40164	858 aa		4.76	□□□□□ -1.65
PTR3	YFR029W	HAP5	Q02516	242 aa		4.76	□□□□□ -1.65
PTR3	YFR029W	SHE9	Q04172	456 aa		4.76	□□□□□ -1.65
PTR3	YFR029W	SPO75	Q07798	868 aa		4.76	□□□□□ -1.65
PTR3	YFR029W	SDH5	Q08230	162 aa		4.76	□□□□□ -1.65
PTR3	YFR029W	RRP6	Q12149	733 aa	Known RBP	4.76	□□□□□ -1.65
PTR3	YFR029W	HSP42	Q12329	375 aa		4.76	□□□□□ -1.65
PTR3	YFR029W	STE6	P12866	1290 aa		4.75	□□□□□ -1.65
PTR3	YFR029W	NUP120	P35729	1037 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms