RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A MCR1P36060 302 aaKnown RBP10.58□□□□□ -0.72
LSB3YFR024C-A YDR341CQ05506 607 aaKnown RBP10.58□□□□□ -0.72
LSB3YFR024C-A DUS3Q06053 668 aaKnown RBP10.58□□□□□ -0.72
LSB3YFR024C-A SHP1P34223 423 aa10.57□□□□□ -0.72
LSB3YFR024C-A BMH2P34730 273 aaKnown RBP10.57□□□□□ -0.72
LSB3YFR024C-A FMS1P50264 508 aa10.57□□□□□ -0.72
LSB3YFR024C-A PWP2P25635 923 aaKnown RBP10.56□□□□□ -0.72
LSB3YFR024C-A VPS29P38759 282 aa10.56□□□□□ -0.72
LSB3YFR024C-A EPL1P43572 832 aa10.56□□□□□ -0.72
LSB3YFR024C-A LIF1P53150 421 aa10.56□□□□□ -0.72
LSB3YFR024C-A GDE1Q02979 1223 aa10.56□□□□□ -0.72
LSB3YFR024C-A BUL2Q03758 920 aaKnown RBP10.56□□□□□ -0.72
LSB3YFR024C-A RKM4Q12504 494 aa10.56□□□□□ -0.72
LSB3YFR024C-A ECM29P38737 1868 aa10.56□□□□□ -0.72
LSB3YFR024C-A TY1B-AO13527 1196 aaKnown RBP10.55□□□□□ -0.72
LSB3YFR024C-A MET6P05694 767 aaKnown RBP10.55□□□□□ -0.72
LSB3YFR024C-A RXT2P38255 430 aa10.55□□□□□ -0.72
LSB3YFR024C-A NDT80P38830 627 aa10.55□□□□□ -0.72
LSB3YFR024C-A CCT3P39077 534 aaKnown RBP10.55□□□□□ -0.72
LSB3YFR024C-A VPS62P53285 467 aa10.55□□□□□ -0.72
LSB3YFR024C-A SLD5Q03406 294 aa10.55□□□□□ -0.72
LSB3YFR024C-A PIB1Q06651 286 aa10.55□□□□□ -0.72
LSB3YFR024C-A PHR1P05066 565 aaKnown RBP RIP-Chip data10.54□□□□□ -0.72not detected
LSB3YFR024C-A SWI4P25302 1093 aaKnown RBP10.54□□□□□ -0.72
LSB3YFR024C-A UGA4P32837 571 aa10.54□□□□□ -0.72
LSB3YFR024C-A SEC8P32855 1065 aa10.54□□□□□ -0.72
LSB3YFR024C-A PAM1P37304 830 aaKnown RBP10.54□□□□□ -0.72
LSB3YFR024C-A YHL017WP38745 532 aa10.54□□□□□ -0.72
LSB3YFR024C-A ASE1P50275 885 aa10.54□□□□□ -0.72
LSB3YFR024C-A ISA1Q07821 250 aaPredicted RBP10.54□□□□□ -0.72
LSB3YFR024C-A ERP3Q12403 225 aa10.54□□□□□ -0.72
LSB3YFR024C-A YOR131CQ12486 218 aa10.54□□□□□ -0.72
LSB3YFR024C-A MAK11P20484 414 aaKnown RBP10.53□□□□□ -0.72
LSB3YFR024C-A TKL1P23254 680 aaKnown RBP10.53□□□□□ -0.72
LSB3YFR024C-A MCM4P30665 933 aaKnown RBP10.53□□□□□ -0.72
LSB3YFR024C-A PAN5P38787 379 aa10.53□□□□□ -0.72
LSB3YFR024C-A VPS53P47061 822 aa10.53□□□□□ -0.72
LSB3YFR024C-A PSK2Q08217 1101 aa10.53□□□□□ -0.72
LSB3YFR024C-A MSC6Q08818 692 aaKnown RBP10.53□□□□□ -0.72
LSB3YFR024C-A HCA4P20448 770 aaKnown RBP10.52□□□□□ -0.72
LSB3YFR024C-A SAS3P34218 831 aa10.52□□□□□ -0.72
LSB3YFR024C-A LDH1P38139 375 aa10.52□□□□□ -0.72
LSB3YFR024C-A RPN10P38886 268 aaKnown RBP10.52□□□□□ -0.72
LSB3YFR024C-A PCI8P40512 444 aa10.52□□□□□ -0.72
LSB3YFR024C-A AIM21P40563 679 aa10.52□□□□□ -0.72
LSB3YFR024C-A YJR107WP47145 328 aa10.52□□□□□ -0.72
LSB3YFR024C-A BRE5P53741 515 aaKnown RBP10.52□□□□□ -0.72
LSB3YFR024C-A YLR407WQ06070 228 aa10.52□□□□□ -0.72
LSB3YFR024C-A SUT2Q12286 268 aa10.52□□□□□ -0.72
LSB3YFR024C-A STI1P15705 589 aaKnown RBP RIP-Chip data10.52□□□□□ -0.73not detected
LSB3YFR024C-A CBP3P21560 335 aa10.52□□□□□ -0.73
LSB3YFR024C-A TIM23P32897 222 aa10.52□□□□□ -0.73
LSB3YFR024C-A TFC4P33339 1025 aa10.52□□□□□ -0.73
LSB3YFR024C-A MAP2P38174 421 aaKnown RBP10.52□□□□□ -0.73
LSB3YFR024C-A BUD6P41697 788 aa10.52□□□□□ -0.73
LSB3YFR024C-A YGL138CP53122 345 aa10.52□□□□□ -0.73
LSB3YFR024C-A PTA1Q01329 785 aaPredicted RBP10.52□□□□□ -0.73
LSB3YFR024C-A SES1P07284 462 aaKnown RBP10.51□□□□□ -0.73
LSB3YFR024C-A ASF1P32447 279 aa10.51□□□□□ -0.73
LSB3YFR024C-A MAC1P35192 417 aa10.51□□□□□ -0.73
LSB3YFR024C-A REG2P38232 338 aa10.51□□□□□ -0.73
LSB3YFR024C-A SUL1P38359 859 aa10.51□□□□□ -0.73
LSB3YFR024C-A NAF1P53919 492 aaKnown RBP10.51□□□□□ -0.73
LSB3YFR024C-A CEX1Q12453 761 aa10.51□□□□□ -0.73
LSB3YFR024C-A YUR1P26725 428 aa10.5□□□□□ -0.73
LSB3YFR024C-A DBP7P36120 742 aaKnown RBP10.5□□□□□ -0.73
LSB3YFR024C-A YIR014WP40570 242 aa10.5□□□□□ -0.73
LSB3YFR024C-A CTF18P49956 741 aa10.5□□□□□ -0.73
LSB3YFR024C-A BNI5P53890 448 aaKnown RBP10.5□□□□□ -0.73
LSB3YFR024C-A MDM20Q12387 796 aaKnown RBP10.5□□□□□ -0.73
LSB3YFR024C-A RPL19AP0CX82 189 aaKnown RBP10.49□□□□□ -0.73
LSB3YFR024C-A RPL19BP0CX83 189 aaPredicted RBP10.49□□□□□ -0.73
LSB3YFR024C-A SRO9P25567 434 aaKnown RBP10.49□□□□□ -0.73
LSB3YFR024C-A BCS1P32839 456 aa10.49□□□□□ -0.73
LSB3YFR024C-A TTI1P36097 1038 aa10.49□□□□□ -0.73
LSB3YFR024C-A GIS4Q04233 774 aa10.49□□□□□ -0.73
LSB3YFR024C-A YMR321CQ04898 105 aa10.49□□□□□ -0.73
LSB3YFR024C-A YLR326WQ06170 240 aaKnown RBP10.49□□□□□ -0.73
LSB3YFR024C-A SMD2Q06217 110 aaKnown RBP10.49□□□□□ -0.73
LSB3YFR024C-A TRM11Q12463 433 aa10.49□□□□□ -0.73
LSB3YFR024C-A RLF2Q12495 606 aa10.49□□□□□ -0.73
LSB3YFR024C-A PDC1P06169 563 aaKnown RBP10.48□□□□□ -0.73
LSB3YFR024C-A POX1P13711 748 aa10.48□□□□□ -0.73
LSB3YFR024C-A KSP1P38691 1029 aaKnown RBP10.48□□□□□ -0.73
LSB3YFR024C-A YGL039WP53183 348 aaKnown RBP10.48□□□□□ -0.73
LSB3YFR024C-A OYE2Q03558 400 aaKnown RBP10.48□□□□□ -0.73
LSB3YFR024C-A OXR1Q08952 273 aa10.48□□□□□ -0.73
LSB3YFR024C-A ELG1Q12050 791 aa10.48□□□□□ -0.73
LSB3YFR024C-A DBP1P24784 617 aaKnown RBP10.47□□□□□ -0.73
LSB3YFR024C-A GPT2P36148 743 aa10.47□□□□□ -0.73
LSB3YFR024C-A NOC2P39744 710 aaKnown RBP10.47□□□□□ -0.73
LSB3YFR024C-A AFG3P39925 761 aa10.47□□□□□ -0.73
LSB3YFR024C-A RET3P53600 189 aa10.47□□□□□ -0.73
LSB3YFR024C-A FKS1P38631 1876 aaKnown RBP10.47□□□□□ -0.73
LSB3YFR024C-A CLB5P30283 435 aa10.46□□□□□ -0.74
LSB3YFR024C-A BCH2P36122 765 aa10.46□□□□□ -0.74
LSB3YFR024C-A UIP5P36137 443 aa10.46□□□□□ -0.74
LSB3YFR024C-A ENT3P47160 408 aa10.46□□□□□ -0.74
LSB3YFR024C-A HUL5P53119 910 aa10.46□□□□□ -0.74
LSB3YFR024C-A CSM3Q04659 317 aa10.46□□□□□ -0.74
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms