RNA–Protein interactions for RNA: YFL045C

SEC53, Transcript of Phosphomannomutase, yeast

Gene SEC53, Length 765 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC53	YFL045C	REC8	Q12188	680 aa		4.71	□□□□□ -1.66
SEC53	YFL045C	BNR1	P40450	1375 aa		4.7	□□□□□ -1.66
SEC53	YFL045C	PHO4	P07270	312 aa	Known RBP	4.7	□□□□□ -1.66
SEC53	YFL045C	ERS1	P17261	260 aa		4.7	□□□□□ -1.66
SEC53	YFL045C	RSC6	P25632	483 aa		4.7	□□□□□ -1.66
SEC53	YFL045C	SAM37	P50110	327 aa		4.7	□□□□□ -1.66
SEC53	YFL045C	INP54	Q08227	384 aa	Known RBP	4.7	□□□□□ -1.66
SEC53	YFL045C	NOP8	Q08287	484 aa	Predicted RBP	4.7	□□□□□ -1.66
SEC53	YFL045C	WHI5	Q12416	295 aa		4.7	□□□□□ -1.66
SEC53	YFL045C	HTS1	P07263	546 aa	Known RBP	4.69	□□□□□ -1.66
SEC53	YFL045C	MAE1	P36013	669 aa	Known RBP	4.69	□□□□□ -1.66
SEC53	YFL045C	YHL008C	P38750	627 aa		4.69	□□□□□ -1.66
SEC53	YFL045C	VPS27	P40343	622 aa	Known RBP	4.69	□□□□□ -1.66
SEC53	YFL045C	GCV1	P48015	400 aa		4.69	□□□□□ -1.66
SEC53	YFL045C	KIP3	P53086	805 aa	Known RBP	4.69	□□□□□ -1.66
SEC53	YFL045C	PMT7	Q06644	662 aa		4.69	□□□□□ -1.66
SEC53	YFL045C	NOC3	Q07896	663 aa	Predicted RBP	4.69	□□□□□ -1.66
SEC53	YFL045C	CDC45	Q08032	650 aa		4.69	□□□□□ -1.66
SEC53	YFL045C	TAF5	P38129	798 aa		4.68	□□□□□ -1.66
SEC53	YFL045C	YRB30	P53107	440 aa	Predicted RBP	4.68	□□□□□ -1.66
SEC53	YFL045C	YAF9	P53930	226 aa		4.68	□□□□□ -1.66
SEC53	YFL045C	RPO21	P04050	1733 aa	Known RBP	4.68	□□□□□ -1.66
SEC53	YFL045C	RPA190	P10964	1664 aa	Known RBP	4.67	□□□□□ -1.66
SEC53	YFL045C	NTE1	Q04958	1679 aa		4.67	□□□□□ -1.66
SEC53	YFL045C	DRS2	P39524	1355 aa		4.67	□□□□□ -1.66
SEC53	YFL045C	SEC20	P28791	383 aa		4.67	□□□□□ -1.66
SEC53	YFL045C	VPS35	P34110	944 aa		4.67	□□□□□ -1.66
SEC53	YFL045C	ECM2	P38241	364 aa	Known RBP	4.67	□□□□□ -1.66
SEC53	YFL045C	FPR3	P38911	411 aa	Known RBP	4.67	□□□□□ -1.66
SEC53	YFL045C	YCS4	Q06156	1176 aa		4.67	□□□□□ -1.66
SEC53	YFL045C	YLR122C	Q12312	125 aa		4.67	□□□□□ -1.66
SEC53	YFL045C	MET5	P47169	1442 aa		4.66	□□□□□ -1.66
SEC53	YFL045C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.66	□□□□□ -1.66
SEC53	YFL045C	TY1A-DR6	P0CX70	440 aa		4.66	□□□□□ -1.66
SEC53	YFL045C	TY1A-ER1	P0CX71	440 aa		4.66	□□□□□ -1.66
SEC53	YFL045C	TY1A-LR2	P0CX72	440 aa		4.66	□□□□□ -1.66
SEC53	YFL045C	TY1A-PL	P0CX73	440 aa		4.66	□□□□□ -1.66
SEC53	YFL045C	TY1A-JR1	P0CX74	440 aa		4.66	□□□□□ -1.66
SEC53	YFL045C	TY1A-LR3	P0CX75	440 aa		4.66	□□□□□ -1.66
SEC53	YFL045C	TY1A-ML2	P0CX76	440 aa		4.66	□□□□□ -1.66
SEC53	YFL045C	SAF1	P38352	637 aa		4.66	□□□□□ -1.66
SEC53	YFL045C	CIC1	P38779	376 aa	Known RBP	4.66	□□□□□ -1.66
SEC53	YFL045C	RVS167	P39743	482 aa	Known RBP	4.66	□□□□□ -1.66
SEC53	YFL045C	FAR11	P53917	953 aa		4.66	□□□□□ -1.66
SEC53	YFL045C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
SEC53	YFL045C	TY1A-GR1	Q12085	440 aa		4.66	□□□□□ -1.66
SEC53	YFL045C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.66	□□□□□ -1.66
SEC53	YFL045C	TY1A-OL	Q92392	440 aa	Known RBP	4.66	□□□□□ -1.66
SEC53	YFL045C	CFT1	Q06632	1357 aa	Known RBP	4.65	□□□□□ -1.66
SEC53	YFL045C	BUD3	P25558	1636 aa		4.65	□□□□□ -1.66
SEC53	YFL045C	SPE2	P21182	396 aa		4.65	□□□□□ -1.67
SEC53	YFL045C	GCD6	P32501	712 aa	Known RBP	4.65	□□□□□ -1.67
SEC53	YFL045C	IPL1	P38991	367 aa		4.65	□□□□□ -1.67
SEC53	YFL045C	DAK2	P43550	591 aa		4.65	□□□□□ -1.67
SEC53	YFL045C	MON1	P53129	644 aa		4.65	□□□□□ -1.67
SEC53	YFL045C	MEC3	Q02574	474 aa		4.65	□□□□□ -1.67
SEC53	YFL045C	YML020W	Q03722	664 aa		4.65	□□□□□ -1.67
SEC53	YFL045C	TOS4	Q06266	489 aa		4.65	□□□□□ -1.67
SEC53	YFL045C	NAM7	P30771	971 aa	Known RBP	4.64	□□□□□ -1.67
SEC53	YFL045C	COQ2	P32378	372 aa		4.64	□□□□□ -1.67
SEC53	YFL045C	IME2	P32581	645 aa		4.64	□□□□□ -1.67
SEC53	YFL045C	ARL1	P38116	183 aa	Known RBP	4.64	□□□□□ -1.67
SEC53	YFL045C	EXO5	P38289	585 aa		4.64	□□□□□ -1.67
SEC53	YFL045C	UTP22	P53254	1237 aa	Predicted RBP	4.64	□□□□□ -1.67
SEC53	YFL045C	NOG1	Q02892	647 aa	Known RBP	4.64	□□□□□ -1.67
SEC53	YFL045C	PDR11	P40550	1411 aa		4.63	□□□□□ -1.67
SEC53	YFL045C	MCM5	P29496	775 aa	Known RBP	4.63	□□□□□ -1.67
SEC53	YFL045C	PRP40	P33203	583 aa	Known RBP	4.63	□□□□□ -1.67
SEC53	YFL045C	YOR223W	Q12015	292 aa		4.63	□□□□□ -1.67
SEC53	YFL045C	RVB2	Q12464	471 aa	Known RBP	4.63	□□□□□ -1.67
SEC53	YFL045C	SPO14	P36126	1683 aa		4.63	□□□□□ -1.67
SEC53	YFL045C	YOR093C	Q12275	1648 aa		4.62	□□□□□ -1.67
SEC53	YFL045C	SBP1	P10080	294 aa	Known RBP	4.62	□□□□□ -1.67
SEC53	YFL045C	CAB3	P36076	571 aa		4.62	□□□□□ -1.67
SEC53	YFL045C	KAE1	P36132	386 aa		4.62	□□□□□ -1.67
SEC53	YFL045C	YKR073C	P36153	106 aa		4.62	□□□□□ -1.67
SEC53	YFL045C	AKR1	P39010	764 aa		4.62	□□□□□ -1.67
SEC53	YFL045C	YIR014W	P40570	242 aa		4.62	□□□□□ -1.67
SEC53	YFL045C	INP52	P50942	1183 aa		4.62	□□□□□ -1.67
SEC53	YFL045C	YLL054C	Q12244	843 aa		4.62	□□□□□ -1.67
SEC53	YFL045C	TRP3	P00937	484 aa		4.61	□□□□□ -1.67
SEC53	YFL045C	HXK1	P04806	485 aa	Known RBP	4.61	□□□□□ -1.67
SEC53	YFL045C	CLC1	P17891	233 aa		4.61	□□□□□ -1.67
SEC53	YFL045C	UGA4	P32837	571 aa		4.61	□□□□□ -1.67
SEC53	YFL045C	OPY1	P38271	328 aa		4.61	□□□□□ -1.67
SEC53	YFL045C	NEM1	P38757	446 aa		4.61	□□□□□ -1.67
SEC53	YFL045C	YPL109C	Q02981	657 aa		4.61	□□□□□ -1.67
SEC53	YFL045C	RRP15	Q06511	250 aa	Predicted RBP	4.61	□□□□□ -1.67
SEC53	YFL045C	YDL144C	Q07589	356 aa		4.61	□□□□□ -1.67
SEC53	YFL045C	REI1	P38344	393 aa	Predicted RBP	4.6	□□□□□ -1.67
SEC53	YFL045C	SPO74	P45819	413 aa		4.6	□□□□□ -1.67
SEC53	YFL045C	EAF7	P53911	425 aa	Known RBP	4.6	□□□□□ -1.67
SEC53	YFL045C	ULP1	Q02724	621 aa		4.6	□□□□□ -1.67
SEC53	YFL045C	DOT1	Q04089	582 aa	Known RBP	4.6	□□□□□ -1.67
SEC53	YFL045C	YMR074C	Q04773	145 aa		4.6	□□□□□ -1.67
SEC53	YFL045C	DAL4	Q04895	635 aa		4.6	□□□□□ -1.67
SEC53	YFL045C	URN1	Q06525	465 aa	Known RBP	4.6	□□□□□ -1.67
SEC53	YFL045C	CHS2	P14180	963 aa		4.59	□□□□□ -1.67
SEC53	YFL045C	MSB1	P21339	1137 aa	Known RBP	4.59	□□□□□ -1.67
SEC53	YFL045C	NAP1	P25293	417 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 200.8 ms