RNA–Protein interactions for RNA: YFL009W

CDC4, Transcript of F-box protein required for both the G1/S and G2/M phase transitions, yeastyeast

Gene CDC4, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC4YFL009W GYP1Q08484 637 aa5.6□□□□□ -1.51
CDC4YFL009W VAS1P07806 1104 aaKnown RBP5.59□□□□□ -1.51
CDC4YFL009W STE11P23561 717 aa5.59□□□□□ -1.51
CDC4YFL009W ASF1P32447 279 aa5.59□□□□□ -1.51
CDC4YFL009W MRT4P33201 236 aaKnown RBP5.59□□□□□ -1.51
CDC4YFL009W NPR3P38742 1146 aa5.59□□□□□ -1.51
CDC4YFL009W IAH1P41734 238 aa5.59□□□□□ -1.51
CDC4YFL009W CSI1Q04368 295 aa5.59□□□□□ -1.51
CDC4YFL009W TAP42Q04372 366 aa5.59□□□□□ -1.51
CDC4YFL009W BCK1Q01389 1478 aa5.59□□□□□ -1.51
CDC4YFL009W SEC8P32855 1065 aa5.59□□□□□ -1.51
CDC4YFL009W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.59□□□□□ -1.51not detected
CDC4YFL009W ALD3P54114 506 aa5.59□□□□□ -1.51
CDC4YFL009W COG4Q06096 861 aa5.59□□□□□ -1.51
CDC4YFL009W STE6P12866 1290 aa5.58□□□□□ -1.52
CDC4YFL009W FRS2P15625 503 aaKnown RBP5.58□□□□□ -1.52
CDC4YFL009W MBR1P23493 339 aa5.58□□□□□ -1.52
CDC4YFL009W SAP1P39955 897 aaKnown RBP5.58□□□□□ -1.52
CDC4YFL009W ARP5P53946 755 aa5.58□□□□□ -1.52
CDC4YFL009W GYL1Q04322 720 aa5.58□□□□□ -1.52
CDC4YFL009W NDL1Q06568 189 aa5.58□□□□□ -1.52
CDC4YFL009W MRPS28P21771 286 aa5.58□□□□□ -1.52
CDC4YFL009W KIP2P28743 706 aa5.58□□□□□ -1.52
CDC4YFL009W PSO2P30620 661 aa5.58□□□□□ -1.52
CDC4YFL009W ISC10P32645 267 aa5.58□□□□□ -1.52
CDC4YFL009W RRP1P35178 278 aaPredicted RBP5.58□□□□□ -1.52
CDC4YFL009W RRP14P36080 434 aaKnown RBP5.58□□□□□ -1.52
CDC4YFL009W YBL086CP38177 466 aa5.58□□□□□ -1.52
CDC4YFL009W RLP24Q07915 199 aaKnown RBP5.58□□□□□ -1.52
CDC4YFL009W CTI6Q08923 506 aa5.58□□□□□ -1.52
CDC4YFL009W NUP188P52593 1655 aaKnown RBP5.58□□□□□ -1.52
CDC4YFL009W RPC82P32349 654 aa5.57□□□□□ -1.52
CDC4YFL009W TYS1P36421 394 aaKnown RBP5.57□□□□□ -1.52
CDC4YFL009W FYV10P40492 516 aa5.57□□□□□ -1.52
CDC4YFL009W RSC8P43609 557 aaKnown RBP5.57□□□□□ -1.52
CDC4YFL009W GYP7P48365 746 aa5.57□□□□□ -1.52
CDC4YFL009W SRT1Q03175 343 aa5.57□□□□□ -1.52
CDC4YFL009W YRF1-1P0CX20 1796 aa5.57□□□□□ -1.52
CDC4YFL009W YRF1-5P0CX21 1796 aa5.57□□□□□ -1.52
CDC4YFL009W YRF1-8P0CX22 1796 aa5.57□□□□□ -1.52
CDC4YFL009W CDC16P09798 840 aa5.57□□□□□ -1.52
CDC4YFL009W RPL19AP0CX82 189 aaKnown RBP5.57□□□□□ -1.52
CDC4YFL009W RPL19BP0CX83 189 aaPredicted RBP5.57□□□□□ -1.52
CDC4YFL009W UTR2P32623 467 aa5.57□□□□□ -1.52
CDC4YFL009W CTH1P47976 325 aa5.57□□□□□ -1.52
CDC4YFL009W VID30P53076 958 aa5.57□□□□□ -1.52
CDC4YFL009W SYH1Q02875 849 aaKnown RBP5.57□□□□□ -1.52
CDC4YFL009W SRC1Q03707 834 aa5.57□□□□□ -1.52
CDC4YFL009W TRS120Q04183 1289 aa5.57□□□□□ -1.52
CDC4YFL009W SGD1Q06132 899 aa5.57□□□□□ -1.52
CDC4YFL009W USO1P25386 1790 aa5.56□□□□□ -1.52
CDC4YFL009W CTK3P46963 296 aaPredicted RBP5.56□□□□□ -1.52
CDC4YFL009W YPL225WQ08971 146 aaKnown RBP5.56□□□□□ -1.52
CDC4YFL009W TOP1P04786 769 aa5.56□□□□□ -1.52
CDC4YFL009W PHO4P07270 312 aaKnown RBP5.56□□□□□ -1.52
CDC4YFL009W YBR287WP38355 427 aa5.56□□□□□ -1.52
CDC4YFL009W DSD1P53095 428 aa5.56□□□□□ -1.52
CDC4YFL009W OYE2Q03558 400 aaKnown RBP5.56□□□□□ -1.52
CDC4YFL009W MAG2Q06436 670 aaKnown RBP5.56□□□□□ -1.52
CDC4YFL009W YOR389WQ08912 624 aa5.56□□□□□ -1.52
CDC4YFL009W ATG9Q12142 997 aa5.56□□□□□ -1.52
CDC4YFL009W RPS19AP07280 144 aaKnown RBP5.55□□□□□ -1.52
CDC4YFL009W RPS19BP07281 144 aaPredicted RBP5.55□□□□□ -1.52
CDC4YFL009W MKS1P34072 584 aa5.55□□□□□ -1.52
CDC4YFL009W PRX1P34227 261 aaKnown RBP5.55□□□□□ -1.52
CDC4YFL009W OLA1P38219 394 aaKnown RBP5.55□□□□□ -1.52
CDC4YFL009W THI12P42883 340 aa5.55□□□□□ -1.52
CDC4YFL009W THI5P43534 340 aa5.55□□□□□ -1.52
CDC4YFL009W OSW7P43611 510 aa5.55□□□□□ -1.52
CDC4YFL009W THI11P47183 340 aa5.55□□□□□ -1.52
CDC4YFL009W FRK1Q03002 865 aaPredicted RBP5.55□□□□□ -1.52
CDC4YFL009W TLG1Q03322 224 aa5.55□□□□□ -1.52
CDC4YFL009W TOS4Q06266 489 aa5.55□□□□□ -1.52
CDC4YFL009W THI13Q07748 340 aa5.55□□□□□ -1.52
CDC4YFL009W WTM2Q12206 467 aa5.55□□□□□ -1.52
CDC4YFL009W YLL054CQ12244 843 aa5.55□□□□□ -1.52
CDC4YFL009W RAD16P31244 790 aa5.54□□□□□ -1.52
CDC4YFL009W PUP2P32379 260 aa5.54□□□□□ -1.52
CDC4YFL009W DPH5P32469 300 aaPredicted RBP5.54□□□□□ -1.52
CDC4YFL009W MET1P36150 593 aa5.54□□□□□ -1.52
CDC4YFL009W OCA5P38738 679 aa5.54□□□□□ -1.52
CDC4YFL009W FOX2Q02207 900 aaKnown RBP5.54□□□□□ -1.52
CDC4YFL009W INP2Q03824 705 aa5.54□□□□□ -1.52
CDC4YFL009W ABP140Q08641 628 aaKnown RBP5.54□□□□□ -1.52
CDC4YFL009W GRX4P32642 244 aa5.54□□□□□ -1.52
CDC4YFL009W VPS8P39702 1274 aa5.54□□□□□ -1.52
CDC4YFL009W PEX14P53112 341 aa5.54□□□□□ -1.52
CDC4YFL009W YNL165WP53891 406 aa5.54□□□□□ -1.52
CDC4YFL009W MUD2P36084 527 aaKnown RBP5.53□□□□□ -1.52
CDC4YFL009W ZDS1P50111 915 aaKnown RBP5.53□□□□□ -1.52
CDC4YFL009W MAL13P53338 473 aa5.53□□□□□ -1.52
CDC4YFL009W RIA1P53893 1110 aa5.53□□□□□ -1.52
CDC4YFL009W RCM1P53972 490 aa5.53□□□□□ -1.52
CDC4YFL009W DNM1P54861 757 aa5.53□□□□□ -1.52
CDC4YFL009W DFG5Q05031 458 aa5.53□□□□□ -1.52
CDC4YFL009W OMS1Q06668 471 aa5.53□□□□□ -1.52
CDC4YFL009W RRP5Q05022 1729 aaKnown RBP5.53□□□□□ -1.52
CDC4YFL009W DUR1,2P32528 1835 aaKnown RBP5.53□□□□□ -1.52
CDC4YFL009W PPH3P32345 308 aa5.53□□□□□ -1.52
CDC4YFL009W RRB1Q04225 511 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms