RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W ULP1Q02724 621 aa8.11□□□□□ -1.11
PDA1YER178W BUL2Q03758 920 aaKnown RBP8.11□□□□□ -1.11
PDA1YER178W VPS20Q04272 221 aa8.11□□□□□ -1.11
PDA1YER178W YMR321CQ04898 105 aa8.11□□□□□ -1.11
PDA1YER178W TY3A-GQ12173 290 aa8.11□□□□□ -1.11
PDA1YER178W TY3A-IQ99219 290 aa8.11□□□□□ -1.11
PDA1YER178W CIT1P00890 479 aa8.1□□□□□ -1.11
PDA1YER178W SDH2P21801 266 aa8.1□□□□□ -1.11
PDA1YER178W MCR1P36060 302 aaKnown RBP8.1□□□□□ -1.11
PDA1YER178W MAL31P38156 614 aa8.1□□□□□ -1.11
PDA1YER178W VPS29P38759 282 aa8.1□□□□□ -1.11
PDA1YER178W PES4P39684 611 aa8.1□□□□□ -1.11
PDA1YER178W YIR014WP40570 242 aa8.1□□□□□ -1.11
PDA1YER178W YKE2P52553 114 aa8.1□□□□□ -1.11
PDA1YER178W ATG1P53104 897 aa8.1□□□□□ -1.11
PDA1YER178W GIS4Q04233 774 aa8.1□□□□□ -1.11
PDA1YER178W YDR341CQ05506 607 aaKnown RBP8.1□□□□□ -1.11
PDA1YER178W WHI4Q07655 649 aaKnown RBP8.1□□□□□ -1.11
PDA1YER178W CLF1Q12309 687 aaPredicted RBP8.1□□□□□ -1.11
PDA1YER178W PRE10P21242 288 aaKnown RBP RIP-Chip data8.09□□□□□ -1.11not detected
PDA1YER178W BMH2P34730 273 aaKnown RBP8.09□□□□□ -1.11
PDA1YER178W TOM71P38825 639 aaKnown RBP8.09□□□□□ -1.11
PDA1YER178W PSF2P40359 213 aa8.09□□□□□ -1.11
PDA1YER178W ALG2P43636 503 aa8.09□□□□□ -1.11
PDA1YER178W YGL138CP53122 345 aa8.09□□□□□ -1.11
PDA1YER178W YGR125WP53273 1036 aa8.09□□□□□ -1.11
PDA1YER178W ARP5P53946 755 aa8.09□□□□□ -1.11
PDA1YER178W SLD5Q03406 294 aa8.09□□□□□ -1.11
PDA1YER178W GUD1Q07729 489 aa8.09□□□□□ -1.11
PDA1YER178W RKM4Q12504 494 aa8.09□□□□□ -1.11
PDA1YER178W SRP40P32583 406 aaPredicted RBP8.08□□□□□ -1.12
PDA1YER178W YKR023WP36119 530 aaKnown RBP8.08□□□□□ -1.12
PDA1YER178W VIP1Q06685 1146 aaKnown RBP8.08□□□□□ -1.12
PDA1YER178W OXR1Q08952 273 aa8.08□□□□□ -1.12
PDA1YER178W CPA2P03965 1118 aaKnown RBP8.07□□□□□ -1.12
PDA1YER178W MAK11P20484 414 aaKnown RBP8.07□□□□□ -1.12
PDA1YER178W UBP11P36026 717 aa8.07□□□□□ -1.12
PDA1YER178W CIT3P43635 486 aa8.07□□□□□ -1.12
PDA1YER178W YGR273CP53329 174 aa8.07□□□□□ -1.12
PDA1YER178W PTA1Q01329 785 aaPredicted RBP8.07□□□□□ -1.12
PDA1YER178W ICL2Q12031 575 aa8.07□□□□□ -1.12
PDA1YER178W DCS2Q12123 353 aa8.07□□□□□ -1.12
PDA1YER178W TKL1P23254 680 aaKnown RBP8.06□□□□□ -1.12
PDA1YER178W MBR1P23493 339 aa8.06□□□□□ -1.12
PDA1YER178W REG2P38232 338 aa8.06□□□□□ -1.12
PDA1YER178W SUL1P38359 859 aa8.06□□□□□ -1.12
PDA1YER178W BRE2P43132 505 aa8.06□□□□□ -1.12
PDA1YER178W LIF1P53150 421 aa8.06□□□□□ -1.12
PDA1YER178W LSB1P53281 241 aa8.06□□□□□ -1.12
PDA1YER178W UBP10P53874 792 aaPredicted RBP8.06□□□□□ -1.12
PDA1YER178W ORC4P54791 529 aa8.06□□□□□ -1.12
PDA1YER178W SMD2Q06217 110 aaKnown RBP8.06□□□□□ -1.12
PDA1YER178W YPL150WQ12152 901 aa8.06□□□□□ -1.12
PDA1YER178W SUT2Q12286 268 aa8.06□□□□□ -1.12
PDA1YER178W PCT1P13259 424 aa8.05□□□□□ -1.12
PDA1YER178W RPL8AP17076 256 aaKnown RBP8.05□□□□□ -1.12
PDA1YER178W CBP3P21560 335 aa8.05□□□□□ -1.12
PDA1YER178W DBP1P24784 617 aaKnown RBP8.05□□□□□ -1.12
PDA1YER178W RGT1P32862 1170 aa8.05□□□□□ -1.12
PDA1YER178W OPY1P38271 328 aa8.05□□□□□ -1.12
PDA1YER178W YHL017WP38745 532 aa8.05□□□□□ -1.12
PDA1YER178W CCT3P39077 534 aaKnown RBP8.05□□□□□ -1.12
PDA1YER178W MXR1P40029 184 aa8.05□□□□□ -1.12
PDA1YER178W GDE1Q02979 1223 aa8.05□□□□□ -1.12
PDA1YER178W AIM33Q04516 312 aa8.05□□□□□ -1.12
PDA1YER178W ISA1Q07821 250 aaPredicted RBP8.05□□□□□ -1.12
PDA1YER178W ARP6Q12509 438 aa8.05□□□□□ -1.12
PDA1YER178W RIF1P29539 1916 aa8.04□□□□□ -1.12
PDA1YER178W CDC19P00549 500 aaKnown RBP8.04□□□□□ -1.12
PDA1YER178W RPL19AP0CX82 189 aaKnown RBP8.04□□□□□ -1.12
PDA1YER178W RPL19BP0CX83 189 aaPredicted RBP8.04□□□□□ -1.12
PDA1YER178W PAH1P32567 862 aa8.04□□□□□ -1.12
PDA1YER178W FLR1P38124 548 aa8.04□□□□□ -1.12
PDA1YER178W VPS62P53285 467 aa8.04□□□□□ -1.12
PDA1YER178W MET7Q08645 548 aa8.04□□□□□ -1.12
PDA1YER178W ELG1Q12050 791 aa8.04□□□□□ -1.12
PDA1YER178W GET3Q12154 354 aaKnown RBP8.04□□□□□ -1.12
PDA1YER178W PTC5Q12511 572 aa8.04□□□□□ -1.12
PDA1YER178W YKR018CP36114 725 aa8.03□□□□□ -1.12
PDA1YER178W GAA1P39012 614 aa8.03□□□□□ -1.12
PDA1YER178W ATG32P40458 529 aa8.03□□□□□ -1.12
PDA1YER178W MSC6Q08818 692 aaKnown RBP8.03□□□□□ -1.12
PDA1YER178W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
PDA1YER178W YOR131CQ12486 218 aa8.03□□□□□ -1.12
PDA1YER178W HSP82P02829 709 aaKnown RBP8.02□□□□□ -1.13
PDA1YER178W POX1P13711 748 aa8.02□□□□□ -1.13
PDA1YER178W ESS1P22696 170 aa8.02□□□□□ -1.13
PDA1YER178W RFC5P38251 354 aa8.02□□□□□ -1.13
PDA1YER178W BUD6P41697 788 aa8.02□□□□□ -1.13
PDA1YER178W RPS7BP48164 190 aaKnown RBP8.02□□□□□ -1.13
PDA1YER178W RET3P53600 189 aa8.02□□□□□ -1.13
PDA1YER178W MDM20Q12387 796 aaKnown RBP8.02□□□□□ -1.13
PDA1YER178W TRM11Q12463 433 aa8.02□□□□□ -1.13
PDA1YER178W UBR2Q07963 1872 aa8.02□□□□□ -1.13
PDA1YER178W PDC1P06169 563 aaKnown RBP8.01□□□□□ -1.13
PDA1YER178W URA1P28272 314 aaPredicted RBP8.01□□□□□ -1.13
PDA1YER178W TFC4P33339 1025 aa8.01□□□□□ -1.13
PDA1YER178W KTR2P33550 425 aa8.01□□□□□ -1.13
PDA1YER178W KSP1P38691 1029 aaKnown RBP8.01□□□□□ -1.13
PDA1YER178W TPM2P40414 161 aa8.01□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms