RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C PRE10P21242 288 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
RTR1YER139C HSE1P38753 452 aa5.31□□□□□ -1.56
RTR1YER139C XKS1P42826 600 aa5.31□□□□□ -1.56
RTR1YER139C YJL045WP47052 634 aa5.31□□□□□ -1.56
RTR1YER139C NOG1Q02892 647 aaKnown RBP5.31□□□□□ -1.56
RTR1YER139C GPI13Q07830 1017 aa5.31□□□□□ -1.56
RTR1YER139C YLR358CO13565 187 aa5.3□□□□□ -1.56
RTR1YER139C TUB2P02557 457 aaKnown RBP5.3□□□□□ -1.56
RTR1YER139C YDR132CQ03900 495 aa5.3□□□□□ -1.56
RTR1YER139C FRT1Q99332 602 aa5.3□□□□□ -1.56
RTR1YER139C SRO9P25567 434 aaKnown RBP5.29□□□□□ -1.56
RTR1YER139C GRS1P38088 690 aaKnown RBP5.29□□□□□ -1.56
RTR1YER139C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
RTR1YER139C LAP2Q10740 671 aa5.29□□□□□ -1.56
RTR1YER139C MSH3P25336 1018 aa5.28□□□□□ -1.56
RTR1YER139C YNR063WP53749 607 aa5.28□□□□□ -1.56
RTR1YER139C YCS4Q06156 1176 aa5.27□□□□□ -1.57
RTR1YER139C RSC58Q07979 502 aa5.27□□□□□ -1.57
RTR1YER139C SAM37P50110 327 aa5.26□□□□□ -1.57
RTR1YER139C SPT20P50875 604 aa5.26□□□□□ -1.57
RTR1YER139C PEX13P80667 386 aa5.26□□□□□ -1.57
RTR1YER139C SPS1P08458 490 aa5.25□□□□□ -1.57
RTR1YER139C ATG14P38270 344 aa5.25□□□□□ -1.57
RTR1YER139C CIC1P38779 376 aaKnown RBP5.25□□□□□ -1.57
RTR1YER139C QNS1P38795 714 aaKnown RBP5.25□□□□□ -1.57
RTR1YER139C MDJ2P42834 146 aa5.25□□□□□ -1.57
RTR1YER139C NUT2Q06213 157 aa5.25□□□□□ -1.57
RTR1YER139C PNS1Q12412 539 aa5.25□□□□□ -1.57
RTR1YER139C TAD3Q9URQ3 322 aa5.25□□□□□ -1.57
RTR1YER139C YSC84P32793 468 aa5.24□□□□□ -1.57
RTR1YER139C UGA4P32837 571 aa5.24□□□□□ -1.57
RTR1YER139C TAT2P38967 592 aa5.24□□□□□ -1.57
RTR1YER139C NBA1Q08229 501 aaKnown RBP5.24□□□□□ -1.57
RTR1YER139C YOR352WQ08816 343 aa5.24□□□□□ -1.57
RTR1YER139C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
RTR1YER139C VMA4P22203 233 aaKnown RBP5.23□□□□□ -1.57
RTR1YER139C ERP5P38819 212 aa5.23□□□□□ -1.57
RTR1YER139C MPT5P39016 859 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
RTR1YER139C RSM26P47141 266 aa5.23□□□□□ -1.57
RTR1YER139C GCN5Q03330 439 aa5.23□□□□□ -1.57
RTR1YER139C SGD1Q06132 899 aa5.23□□□□□ -1.57
RTR1YER139C RCL1Q08096 367 aaPredicted RBP5.23□□□□□ -1.57
RTR1YER139C LAM1P38851 1228 aa5.22□□□□□ -1.57
RTR1YER139C MEF2P39677 819 aa5.22□□□□□ -1.57
RTR1YER139C ENV11P53246 860 aa5.22□□□□□ -1.57
RTR1YER139C YBL113CQ7M4S9 792 aa5.22□□□□□ -1.57
RTR1YER139C PRP40P33203 583 aaKnown RBP5.21□□□□□ -1.58
RTR1YER139C COQ4O13525 335 aa5.19□□□□□ -1.58
RTR1YER139C CYC1P00044 109 aaPredicted RBP5.19□□□□□ -1.58
RTR1YER139C SQT1P35184 431 aa5.19□□□□□ -1.58
RTR1YER139C VPS53P47061 822 aa5.19□□□□□ -1.58
RTR1YER139C ULP1Q02724 621 aa5.19□□□□□ -1.58
RTR1YER139C RKM2Q03942 479 aa5.19□□□□□ -1.58
RTR1YER139C ADD66P36040 267 aa5.18□□□□□ -1.58
RTR1YER139C RDH54P38086 958 aa5.18□□□□□ -1.58
RTR1YER139C PEX28P38848 579 aa5.18□□□□□ -1.58
RTR1YER139C ROT1Q03691 256 aa5.18□□□□□ -1.58
RTR1YER139C RLF2Q12495 606 aa5.18□□□□□ -1.58
RTR1YER139C CCZ1P38273 704 aa5.17□□□□□ -1.58
RTR1YER139C GPB2P39717 880 aa5.17□□□□□ -1.58
RTR1YER139C PUS9Q12069 462 aa5.17□□□□□ -1.58
RTR1YER139C HEM13P11353 328 aaKnown RBP5.16□□□□□ -1.58
RTR1YER139C KIP1P28742 1111 aa5.16□□□□□ -1.58
RTR1YER139C TRM2P33753 639 aa5.16□□□□□ -1.58
RTR1YER139C SEC26P41810 973 aaKnown RBP5.16□□□□□ -1.58
RTR1YER139C DAL4Q04895 635 aa5.16□□□□□ -1.58
RTR1YER139C DUS4Q06063 367 aa5.16□□□□□ -1.58
RTR1YER139C PUF4P25339 888 aaKnown RBP RIP-Chip data5.15□□□□□ -1.59not detected
RTR1YER139C CDC3P32457 520 aaKnown RBP5.15□□□□□ -1.59
RTR1YER139C AFG2P32794 780 aa5.15□□□□□ -1.59
RTR1YER139C BAP2P38084 609 aa5.15□□□□□ -1.59
RTR1YER139C HNT2P49775 206 aa5.15□□□□□ -1.59
RTR1YER139C PLB2Q03674 706 aa5.15□□□□□ -1.59
RTR1YER139C SPO21Q12411 609 aa5.15□□□□□ -1.59
RTR1YER139C KAR2P16474 682 aaKnown RBP5.14□□□□□ -1.59
RTR1YER139C MSE1P48525 536 aa5.14□□□□□ -1.59
RTR1YER139C YGL140CP53120 1219 aa5.14□□□□□ -1.59
RTR1YER139C SLI1P53304 468 aa5.14□□□□□ -1.59
RTR1YER139C TNA1P53322 534 aa5.14□□□□□ -1.59
RTR1YER139C SSA1P10591 642 aaKnown RBP5.13□□□□□ -1.59
RTR1YER139C DOM34P33309 386 aa5.13□□□□□ -1.59
RTR1YER139C TOS4Q06266 489 aa5.13□□□□□ -1.59
RTR1YER139C RSB1Q08417 382 aa5.13□□□□□ -1.59
RTR1YER139C SNF5P18480 905 aa5.12□□□□□ -1.59
RTR1YER139C PIK1P39104 1066 aa5.12□□□□□ -1.59
RTR1YER139C HOS3Q02959 697 aaKnown RBP5.12□□□□□ -1.59
RTR1YER139C EST2Q06163 884 aa5.12□□□□□ -1.59
RTR1YER139C TMA10Q06177 86 aa5.12□□□□□ -1.59
RTR1YER139C HAT1Q12341 374 aa5.12□□□□□ -1.59
RTR1YER139C PTC5Q12511 572 aa5.12□□□□□ -1.59
RTR1YER139C GAL10P04397 699 aa5.11□□□□□ -1.59
RTR1YER139C PHO4P07270 312 aaKnown RBP5.11□□□□□ -1.59
RTR1YER139C HCM1P25364 564 aa5.11□□□□□ -1.59
RTR1YER139C GCD6P32501 712 aaKnown RBP5.11□□□□□ -1.59
RTR1YER139C VPS35P34110 944 aa5.11□□□□□ -1.59
RTR1YER139C SRM1P21827 482 aa5.1□□□□□ -1.59
RTR1YER139C CDC20P26309 610 aa5.1□□□□□ -1.59
RTR1YER139C LST4P34239 828 aa5.1□□□□□ -1.59
RTR1YER139C YPT53P36019 220 aa5.1□□□□□ -1.59
RTR1YER139C SUN4P53616 420 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms