RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W SBE2P42223 864 aaKnown RBP9.4□□□□□ -0.9
LCP5YER127W SPO74P45819 413 aa9.4□□□□□ -0.9
LCP5YER127W TDA5Q06417 326 aaKnown RBP9.4□□□□□ -0.9
LCP5YER127W SRP40P32583 406 aaPredicted RBP9.39□□□□□ -0.91
LCP5YER127W KIP3P53086 805 aaKnown RBP9.39□□□□□ -0.91
LCP5YER127W THI72Q08579 599 aa9.39□□□□□ -0.91
LCP5YER127W TRP2P00899 507 aaKnown RBP9.38□□□□□ -0.91
LCP5YER127W MKK2P32491 506 aa9.38□□□□□ -0.91
LCP5YER127W ENT3P47160 408 aa9.38□□□□□ -0.91
LCP5YER127W SPO20Q04359 397 aa9.38□□□□□ -0.91
LCP5YER127W LYP1P32487 611 aa9.37□□□□□ -0.91
LCP5YER127W LAP2Q10740 671 aa9.37□□□□□ -0.91
LCP5YER127W SYP1P25623 870 aaKnown RBP9.36□□□□□ -0.91
LCP5YER127W YKL069WP36088 180 aa9.36□□□□□ -0.91
LCP5YER127W YAR028WP39548 234 aa9.36□□□□□ -0.91
LCP5YER127W YJL049WP47048 450 aa9.36□□□□□ -0.91
LCP5YER127W RAT1Q02792 1006 aaKnown RBP9.36□□□□□ -0.91
LCP5YER127W KRI1P42846 591 aaKnown RBP9.35□□□□□ -0.91
LCP5YER127W YGR045CP53229 120 aa9.35□□□□□ -0.91
LCP5YER127W ELA1P53861 379 aaPredicted RBP9.35□□□□□ -0.91
LCP5YER127W RKM2Q03942 479 aa9.35□□□□□ -0.91
LCP5YER127W YLR225CQ05948 407 aaKnown RBP9.35□□□□□ -0.91
LCP5YER127W YOR223WQ12015 292 aa9.35□□□□□ -0.91
LCP5YER127W SPF1P39986 1215 aaKnown RBP9.34□□□□□ -0.91
LCP5YER127W GAS5Q08193 484 aa9.34□□□□□ -0.91
LCP5YER127W MOT2P34909 587 aaKnown RBP9.33□□□□□ -0.92
LCP5YER127W DOT1Q04089 582 aaKnown RBP9.33□□□□□ -0.92
LCP5YER127W ABD1P32783 436 aaPredicted RBP9.32□□□□□ -0.92
LCP5YER127W YKL091CP33324 310 aaKnown RBP9.32□□□□□ -0.92
LCP5YER127W HSE1P38753 452 aa9.32□□□□□ -0.92
LCP5YER127W TIF35Q04067 274 aaKnown RBP9.32□□□□□ -0.92
LCP5YER127W CDC53Q12018 815 aaKnown RBP9.32□□□□□ -0.92
LCP5YER127W INO1P11986 533 aa9.31□□□□□ -0.92
LCP5YER127W AFG2P32794 780 aa9.31□□□□□ -0.92
LCP5YER127W MCM7P38132 845 aa9.31□□□□□ -0.92
LCP5YER127W IOC3P43596 787 aa9.31□□□□□ -0.92
LCP5YER127W NAN1Q02931 896 aaKnown RBP9.31□□□□□ -0.92
LCP5YER127W NSE3Q05541 303 aa9.31□□□□□ -0.92
LCP5YER127W ESC2Q06340 456 aa9.31□□□□□ -0.92
LCP5YER127W TY1A-NL1Q12391 440 aaKnown RBP9.31□□□□□ -0.92
LCP5YER127W PTC5Q12511 572 aa9.31□□□□□ -0.92
LCP5YER127W ALG3P38179 458 aa9.3□□□□□ -0.92
LCP5YER127W CNN1P43618 361 aa9.3□□□□□ -0.92
LCP5YER127W YPL062WQ02781 134 aa9.3□□□□□ -0.92
LCP5YER127W TDA6Q06466 467 aa9.3□□□□□ -0.92
LCP5YER127W RAD4P14736 754 aa9.29□□□□□ -0.92
LCP5YER127W DBP5P20449 482 aaKnown RBP9.29□□□□□ -0.92
LCP5YER127W AGP1P25376 633 aa9.29□□□□□ -0.92
LCP5YER127W BUD9P53226 547 aa9.29□□□□□ -0.92
LCP5YER127W FPR4Q06205 392 aaPredicted RBP9.29□□□□□ -0.92
LCP5YER127W STI1P15705 589 aaKnown RBP RIP-Chip data9.28□□□□□ -0.92not detected
LCP5YER127W MDJ1P35191 511 aa9.28□□□□□ -0.92
LCP5YER127W SEA4P38164 1038 aa9.28□□□□□ -0.92
LCP5YER127W NCE103P53615 221 aa9.28□□□□□ -0.92
LCP5YER127W NSG2P53898 299 aa9.28□□□□□ -0.92
LCP5YER127W AOS1Q06624 347 aa9.28□□□□□ -0.92
LCP5YER127W YOR131CQ12486 218 aa9.28□□□□□ -0.92
LCP5YER127W PUF4P25339 888 aaKnown RBP RIP-Chip data9.27□□□□□ -0.93not detected
LCP5YER127W NFS1P25374 497 aa9.27□□□□□ -0.93
LCP5YER127W GPT2P36148 743 aa9.27□□□□□ -0.93
LCP5YER127W VBA5P36172 582 aa9.27□□□□□ -0.93
LCP5YER127W TAT2P38967 592 aa9.27□□□□□ -0.93
LCP5YER127W YFL066CP43538 392 aa9.27□□□□□ -0.93
LCP5YER127W TIM54P47045 478 aa9.27□□□□□ -0.93
LCP5YER127W RET1P22276 1149 aaKnown RBP9.26□□□□□ -0.93
LCP5YER127W SBA1P28707 216 aaKnown RBP9.26□□□□□ -0.93
LCP5YER127W MLS1P30952 554 aa9.26□□□□□ -0.93
LCP5YER127W YBR184WP38299 523 aa9.26□□□□□ -0.93
LCP5YER127W YGL176CP46945 554 aa9.26□□□□□ -0.93
LCP5YER127W VPS53P47061 822 aa9.26□□□□□ -0.93
LCP5YER127W HUL5P53119 910 aa9.26□□□□□ -0.93
LCP5YER127W RSC6P25632 483 aa9.25□□□□□ -0.93
LCP5YER127W SFA1P32771 386 aa9.25□□□□□ -0.93
LCP5YER127W MCX1P38323 520 aaPredicted RBP9.25□□□□□ -0.93
LCP5YER127W PRY1P47032 299 aa9.25□□□□□ -0.93
LCP5YER127W BDF2Q07442 638 aa9.25□□□□□ -0.93
LCP5YER127W RKM4Q12504 494 aa9.25□□□□□ -0.93
LCP5YER127W SPT6P23615 1451 aaKnown RBP9.25□□□□□ -0.93
LCP5YER127W SPA2P23201 1466 aaKnown RBP9.24□□□□□ -0.93
LCP5YER127W YKL107WP34251 309 aa9.24□□□□□ -0.93
LCP5YER127W QNS1P38795 714 aaKnown RBP9.24□□□□□ -0.93
LCP5YER127W SHE9Q04172 456 aa9.24□□□□□ -0.93
LCP5YER127W RSA3Q05942 220 aaKnown RBP9.24□□□□□ -0.93
LCP5YER127W MRP8P35719 219 aa9.23□□□□□ -0.93
LCP5YER127W NNK1P36003 928 aa9.23□□□□□ -0.93
LCP5YER127W RGD1P38339 666 aa9.23□□□□□ -0.93
LCP5YER127W MSH4P40965 878 aaPredicted RBP9.23□□□□□ -0.93
LCP5YER127W HNT2P49775 206 aa9.23□□□□□ -0.93
LCP5YER127W YLR257WQ06146 321 aaKnown RBP9.23□□□□□ -0.93
LCP5YER127W SPO75Q07798 868 aa9.23□□□□□ -0.93
LCP5YER127W STE5P32917 917 aa9.22□□□□□ -0.93
LCP5YER127W PIN4P34217 668 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
LCP5YER127W NMD3P38861 518 aaKnown RBP9.22□□□□□ -0.93
LCP5YER127W SNF7P39929 240 aaKnown RBP9.22□□□□□ -0.93
LCP5YER127W AI3P03877 415 aa9.21□□□□□ -0.94
LCP5YER127W SMY2P32909 740 aaKnown RBP9.21□□□□□ -0.94
LCP5YER127W IRR1P40541 1150 aa9.21□□□□□ -0.94
LCP5YER127W MPH1P40562 993 aa9.21□□□□□ -0.94
LCP5YER127W OSH2Q12451 1283 aa9.21□□□□□ -0.94
LCP5YER127W HSL1P34244 1518 aa9.21□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms