RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W SFP1P32432 683 aa6.4□□□□□ -1.38
UBC6YER100W MKK2P32491 506 aa6.4□□□□□ -1.38
UBC6YER100W ASH1P34233 588 aa6.4□□□□□ -1.38
UBC6YER100W AMN1P38285 549 aaPredicted RBP6.4□□□□□ -1.38
UBC6YER100W NUP85P46673 744 aa6.4□□□□□ -1.38
UBC6YER100W CLA4P48562 842 aa6.4□□□□□ -1.38
UBC6YER100W ROD1Q02805 837 aa6.4□□□□□ -1.38
UBC6YER100W YDL124WQ07551 312 aaKnown RBP6.4□□□□□ -1.38
UBC6YER100W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
UBC6YER100W INO1P11986 533 aa6.39□□□□□ -1.39
UBC6YER100W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
UBC6YER100W DLD1P32891 587 aa6.39□□□□□ -1.39
UBC6YER100W YKL077WP36081 392 aa6.39□□□□□ -1.39
UBC6YER100W BET3P36149 193 aa6.39□□□□□ -1.39
UBC6YER100W GRX7P38068 203 aa6.39□□□□□ -1.39
UBC6YER100W GEM1P39722 662 aa6.39□□□□□ -1.39
UBC6YER100W LSC2P53312 427 aa6.39□□□□□ -1.39
UBC6YER100W BIO5P53744 561 aaKnown RBP6.39□□□□□ -1.39
UBC6YER100W HEH2Q03281 663 aa6.39□□□□□ -1.39
UBC6YER100W TIF35Q04067 274 aaKnown RBP6.39□□□□□ -1.39
UBC6YER100W EST2Q06163 884 aa6.39□□□□□ -1.39
UBC6YER100W DBP5P20449 482 aaKnown RBP6.38□□□□□ -1.39
UBC6YER100W SYP1P25623 870 aaKnown RBP6.38□□□□□ -1.39
UBC6YER100W PEX6P33760 1030 aa6.38□□□□□ -1.39
UBC6YER100W ARL1P38116 183 aaKnown RBP6.38□□□□□ -1.39
UBC6YER100W GDH3P39708 457 aa6.38□□□□□ -1.39
UBC6YER100W INP51P40559 946 aaKnown RBP6.38□□□□□ -1.39
UBC6YER100W ALR2P43553 858 aa6.38□□□□□ -1.39
UBC6YER100W MAL11P53048 616 aa6.38□□□□□ -1.39
UBC6YER100W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
UBC6YER100W RKM2Q03942 479 aa6.38□□□□□ -1.39
UBC6YER100W SOG2Q08817 791 aa6.38□□□□□ -1.39
UBC6YER100W HTS1P07263 546 aaKnown RBP6.37□□□□□ -1.39
UBC6YER100W PUF4P25339 888 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
UBC6YER100W YKL107WP34251 309 aa6.37□□□□□ -1.39
UBC6YER100W NAB3P38996 802 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
UBC6YER100W CNN1P43618 361 aa6.37□□□□□ -1.39
UBC6YER100W TFB2Q02939 513 aa6.37□□□□□ -1.39
UBC6YER100W SRF1Q12516 437 aa6.37□□□□□ -1.39
UBC6YER100W ADD66P36040 267 aa6.36□□□□□ -1.39
UBC6YER100W PMT3P47190 753 aa6.36□□□□□ -1.39
UBC6YER100W HSV2P50079 448 aaPredicted RBP6.36□□□□□ -1.39
UBC6YER100W GIC2Q06648 383 aa6.36□□□□□ -1.39
UBC6YER100W MDM12Q92328 271 aa6.36□□□□□ -1.39
UBC6YER100W MOT2P34909 587 aaKnown RBP6.35□□□□□ -1.39
UBC6YER100W TFA2P36145 328 aa6.35□□□□□ -1.39
UBC6YER100W MRPL16P38064 232 aa6.35□□□□□ -1.39
UBC6YER100W PMC1P38929 1173 aaPredicted RBP6.35□□□□□ -1.39
UBC6YER100W FET4P40988 552 aa6.35□□□□□ -1.39
UBC6YER100W YJR124CP47159 448 aa6.35□□□□□ -1.39
UBC6YER100W UTP5Q04177 643 aaKnown RBP6.35□□□□□ -1.39
UBC6YER100W ATG13Q06628 738 aa6.35□□□□□ -1.39
UBC6YER100W YIG1Q08956 461 aa6.35□□□□□ -1.39
UBC6YER100W YPL066WQ12194 479 aa6.35□□□□□ -1.39
UBC6YER100W CDC19P00549 500 aaKnown RBP6.34□□□□□ -1.39
UBC6YER100W TY1A-LR4P0C2I8 440 aaKnown RBP6.34□□□□□ -1.39
UBC6YER100W TY1A-DR6P0CX70 440 aa6.34□□□□□ -1.39
UBC6YER100W TY1A-ER1P0CX71 440 aa6.34□□□□□ -1.39
UBC6YER100W TY1A-LR2P0CX72 440 aa6.34□□□□□ -1.39
UBC6YER100W TY1A-PLP0CX73 440 aa6.34□□□□□ -1.39
UBC6YER100W TY1A-JR1P0CX74 440 aa6.34□□□□□ -1.39
UBC6YER100W TY1A-LR3P0CX75 440 aa6.34□□□□□ -1.39
UBC6YER100W TY1A-ML2P0CX76 440 aa6.34□□□□□ -1.39
UBC6YER100W CDC11P32458 415 aa6.34□□□□□ -1.39
UBC6YER100W HBS1P32769 611 aaKnown RBP6.34□□□□□ -1.39
UBC6YER100W NEM1P38757 446 aa6.34□□□□□ -1.39
UBC6YER100W MPH1P40562 993 aa6.34□□□□□ -1.39
UBC6YER100W YGL176CP46945 554 aa6.34□□□□□ -1.39
UBC6YER100W HLJ1P48353 224 aa6.34□□□□□ -1.39
UBC6YER100W HNT2P49775 206 aa6.34□□□□□ -1.39
UBC6YER100W PEX8P53248 589 aa6.34□□□□□ -1.39
UBC6YER100W YNR065CP53751 1116 aa6.34□□□□□ -1.39
UBC6YER100W FOL1P53848 824 aa6.34□□□□□ -1.39
UBC6YER100W TY1A-GR1Q12085 440 aa6.34□□□□□ -1.39
UBC6YER100W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.34□□□□□ -1.39
UBC6YER100W TY1A-OLQ92392 440 aaKnown RBP6.34□□□□□ -1.39
UBC6YER100W HBN1Q96VH4 193 aa6.34□□□□□ -1.39
UBC6YER100W SEC6P32844 805 aa6.33□□□□□ -1.4
UBC6YER100W MBP1P39678 833 aa6.33□□□□□ -1.4
UBC6YER100W LEM3P42838 414 aa6.33□□□□□ -1.4
UBC6YER100W YGR237CP50089 785 aa6.33□□□□□ -1.4
UBC6YER100W GUP1P53154 560 aa6.33□□□□□ -1.4
UBC6YER100W UTP22P53254 1237 aaPredicted RBP6.33□□□□□ -1.4
UBC6YER100W TPO2P53283 614 aa6.33□□□□□ -1.4
UBC6YER100W YNL193WP53870 558 aa6.33□□□□□ -1.4
UBC6YER100W RAT1Q02792 1006 aaKnown RBP6.33□□□□□ -1.4
UBC6YER100W TCB1Q12466 1186 aa6.33□□□□□ -1.4
UBC6YER100W RGD1P38339 666 aa6.32□□□□□ -1.4
UBC6YER100W CCC2P38995 1004 aa6.32□□□□□ -1.4
UBC6YER100W AIR1P40507 360 aaKnown RBP6.32□□□□□ -1.4
UBC6YER100W LSB6P42951 607 aa6.32□□□□□ -1.4
UBC6YER100W AOS1Q06624 347 aa6.32□□□□□ -1.4
UBC6YER100W PWP2P25635 923 aaKnown RBP6.31□□□□□ -1.4
UBC6YER100W MSC7P38694 644 aa6.31□□□□□ -1.4
UBC6YER100W SIT1P39980 628 aa6.31□□□□□ -1.4
UBC6YER100W GUS1P46655 708 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
UBC6YER100W YJL181WP46987 611 aa6.31□□□□□ -1.4
UBC6YER100W UBP2Q01476 1272 aa6.31□□□□□ -1.4
UBC6YER100W CEF1Q03654 590 aaPredicted RBP6.31□□□□□ -1.4
UBC6YER100W YLR001CQ07895 862 aa6.31□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms