RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C MPT5P39016 859 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
SMB1YER029C YNL011CP53980 444 aa4.42□□□□□ -1.7
SMB1YER029C YML122CQ03207 126 aa4.42□□□□□ -1.7
SMB1YER029C PMT7Q06644 662 aa4.42□□□□□ -1.7
SMB1YER029C WHI5Q12416 295 aa4.42□□□□□ -1.7
SMB1YER029C TAT2P38967 592 aa4.41□□□□□ -1.7
SMB1YER029C STM1P39015 273 aaKnown RBP4.41□□□□□ -1.7
SMB1YER029C YAF9P53930 226 aa4.41□□□□□ -1.7
SMB1YER029C BSC2Q05611 235 aa4.41□□□□□ -1.7
SMB1YER029C MSC6Q08818 692 aaKnown RBP4.41□□□□□ -1.7
SMB1YER029C FLP1P03870 423 aa4.4□□□□□ -1.71
SMB1YER029C AIM26P32858 118 aa4.4□□□□□ -1.71
SMB1YER029C YML020WQ03722 664 aa4.4□□□□□ -1.71
SMB1YER029C YLR257WQ06146 321 aaKnown RBP4.4□□□□□ -1.71
SMB1YER029C MET4P32389 672 aa4.39□□□□□ -1.71
SMB1YER029C YKL077WP36081 392 aa4.39□□□□□ -1.71
SMB1YER029C NMD3P38861 518 aaKnown RBP4.39□□□□□ -1.71
SMB1YER029C YAR028WP39548 234 aa4.39□□□□□ -1.71
SMB1YER029C YDR132CQ03900 495 aa4.39□□□□□ -1.71
SMB1YER029C YOR352WQ08816 343 aa4.39□□□□□ -1.71
SMB1YER029C PHO4P07270 312 aaKnown RBP4.38□□□□□ -1.71
SMB1YER029C RET1P22276 1149 aaKnown RBP4.38□□□□□ -1.71
SMB1YER029C MCM5P29496 775 aaKnown RBP4.38□□□□□ -1.71
SMB1YER029C SPT20P50875 604 aa4.38□□□□□ -1.71
SMB1YER029C NUT1P53114 1132 aa4.38□□□□□ -1.71
SMB1YER029C HRK1Q08732 759 aaKnown RBP4.38□□□□□ -1.71
SMB1YER029C PUS9Q12069 462 aa4.38□□□□□ -1.71
SMB1YER029C SRO9P25567 434 aaKnown RBP4.37□□□□□ -1.71
SMB1YER029C TRM2P33753 639 aa4.37□□□□□ -1.71
SMB1YER029C IPL1P38991 367 aa4.37□□□□□ -1.71
SMB1YER029C SLS1P42900 643 aa4.37□□□□□ -1.71
SMB1YER029C ENV11P53246 860 aa4.37□□□□□ -1.71
SMB1YER029C EXO5P38289 585 aa4.36□□□□□ -1.71
SMB1YER029C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71 RIP-Chip
SMB1YER029C TOS4Q06266 489 aa4.36□□□□□ -1.71
SMB1YER029C INP54Q08227 384 aaKnown RBP4.36□□□□□ -1.71
SMB1YER029C SEC20P28791 383 aa4.35□□□□□ -1.71
SMB1YER029C HSE1P38753 452 aa4.35□□□□□ -1.71
SMB1YER029C NEM1P38757 446 aa4.35□□□□□ -1.71
SMB1YER029C SHU2P38957 223 aa4.35□□□□□ -1.71
SMB1YER029C MSE1P48525 536 aa4.35□□□□□ -1.71
SMB1YER029C GCN5Q03330 439 aa4.35□□□□□ -1.71
SMB1YER029C SGD1Q06132 899 aa4.35□□□□□ -1.71
SMB1YER029C NOC3Q07896 663 aaPredicted RBP4.35□□□□□ -1.71
SMB1YER029C SPS1P08458 490 aa4.34□□□□□ -1.71
SMB1YER029C MTR4P47047 1073 aaKnown RBP4.34□□□□□ -1.71
SMB1YER029C SAM37P50110 327 aa4.34□□□□□ -1.71
SMB1YER029C RSA3Q05942 220 aaKnown RBP4.34□□□□□ -1.71
SMB1YER029C CIC1P38779 376 aaKnown RBP4.33□□□□□ -1.72
SMB1YER029C LAM1P38851 1228 aa4.33□□□□□ -1.72
SMB1YER029C MEF2P39677 819 aa4.33□□□□□ -1.72
SMB1YER029C RVS167P39743 482 aaKnown RBP4.33□□□□□ -1.72
SMB1YER029C DAK2P43550 591 aa4.33□□□□□ -1.72
SMB1YER029C RRP15Q06511 250 aaPredicted RBP4.33□□□□□ -1.72
SMB1YER029C NBA1Q08229 501 aaKnown RBP4.33□□□□□ -1.72
SMB1YER029C VPS35P34110 944 aa4.32□□□□□ -1.72
SMB1YER029C YJL045WP47052 634 aa4.32□□□□□ -1.72
SMB1YER029C MON1P53129 644 aa4.32□□□□□ -1.72
SMB1YER029C RSC58Q07979 502 aa4.32□□□□□ -1.72
SMB1YER029C LAP2Q10740 671 aa4.32□□□□□ -1.72
SMB1YER029C UGA4P32837 571 aa4.31□□□□□ -1.72
SMB1YER029C SLI1P53304 468 aa4.31□□□□□ -1.72
SMB1YER029C YCS4Q06156 1176 aa4.31□□□□□ -1.72
SMB1YER029C ATE1P16639 503 aa4.3□□□□□ -1.72
SMB1YER029C PUF4P25339 888 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
SMB1YER029C GCD6P32501 712 aaKnown RBP4.3□□□□□ -1.72
SMB1YER029C PRP40P33203 583 aaKnown RBP4.3□□□□□ -1.72
SMB1YER029C FAA3P39002 694 aa4.3□□□□□ -1.72
SMB1YER029C UTP5Q04177 643 aaKnown RBP4.3□□□□□ -1.72
SMB1YER029C ATG14P38270 344 aa4.29□□□□□ -1.72
SMB1YER029C THI12P42883 340 aa4.29□□□□□ -1.72
SMB1YER029C THI5P43534 340 aa4.29□□□□□ -1.72
SMB1YER029C THI11P47183 340 aa4.29□□□□□ -1.72
SMB1YER029C HNT2P49775 206 aa4.29□□□□□ -1.72
SMB1YER029C THI13Q07748 340 aa4.29□□□□□ -1.72
SMB1YER029C CYC1P00044 109 aaPredicted RBP4.28□□□□□ -1.72
SMB1YER029C HXK1P04806 485 aaKnown RBP4.28□□□□□ -1.72
SMB1YER029C HCM1P25364 564 aa4.28□□□□□ -1.72
SMB1YER029C YSC84P32793 468 aa4.28□□□□□ -1.72
SMB1YER029C RPT1P33299 467 aaKnown RBP4.28□□□□□ -1.72
SMB1YER029C DOM34P33309 386 aa4.28□□□□□ -1.72
SMB1YER029C SLD2P34252 453 aa4.28□□□□□ -1.72
SMB1YER029C XKS1P42826 600 aa4.28□□□□□ -1.72
SMB1YER029C SUN4P53616 420 aa4.28□□□□□ -1.72
SMB1YER029C NOG1Q02892 647 aaKnown RBP4.28□□□□□ -1.72
SMB1YER029C ULP1Q02724 621 aa4.27□□□□□ -1.73
SMB1YER029C YPL109CQ02981 657 aa4.27□□□□□ -1.73
SMB1YER029C ROT1Q03691 256 aa4.27□□□□□ -1.73
SMB1YER029C DAL4Q04895 635 aa4.27□□□□□ -1.73
SMB1YER029C URN1Q06525 465 aaKnown RBP4.27□□□□□ -1.73
SMB1YER029C QNS1P38795 714 aaKnown RBP4.26□□□□□ -1.73
SMB1YER029C AIM21P40563 679 aa4.26□□□□□ -1.73
SMB1YER029C POL32P47110 350 aa4.26□□□□□ -1.73
SMB1YER029C YJR107WP47145 328 aa4.26□□□□□ -1.73
SMB1YER029C YNR063WP53749 607 aa4.26□□□□□ -1.73
SMB1YER029C CTF4Q01454 927 aa4.26□□□□□ -1.73
SMB1YER029C DUS4Q06063 367 aa4.26□□□□□ -1.73
SMB1YER029C COQ4O13525 335 aa4.25□□□□□ -1.73
SMB1YER029C RAD53P22216 821 aa4.25□□□□□ -1.73
SMB1YER029C STE11P23561 717 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms