RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W SQT1P35184 431 aa5.95□□□□□ -1.46
PRE1YER012W PPX1P38698 397 aa5.95□□□□□ -1.46
PRE1YER012W PEX28P38848 579 aa5.95□□□□□ -1.46
PRE1YER012W STM1P39015 273 aaKnown RBP5.95□□□□□ -1.46
PRE1YER012W MTR4P47047 1073 aaKnown RBP5.95□□□□□ -1.46
PRE1YER012W YLR257WQ06146 321 aaKnown RBP5.95□□□□□ -1.46
PRE1YER012W RPT1P33299 467 aaKnown RBP5.94□□□□□ -1.46
PRE1YER012W HEM13P11353 328 aaKnown RBP5.93□□□□□ -1.46
PRE1YER012W ECL1P48235 211 aa5.93□□□□□ -1.46
PRE1YER012W LPX1Q12405 387 aaKnown RBP5.93□□□□□ -1.46
PRE1YER012W UBP5P39944 805 aa5.92□□□□□ -1.46
PRE1YER012W RSA3Q05942 220 aaKnown RBP5.92□□□□□ -1.46
PRE1YER012W OXR1Q08952 273 aa5.92□□□□□ -1.46
PRE1YER012W KAR2P16474 682 aaKnown RBP5.91□□□□□ -1.46
PRE1YER012W DED1P06634 604 aaKnown RBP5.9□□□□□ -1.46
PRE1YER012W ATG14P38270 344 aa5.9□□□□□ -1.46
PRE1YER012W YJL045WP47052 634 aa5.9□□□□□ -1.46
PRE1YER012W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
PRE1YER012W YGL140CP53120 1219 aa5.89□□□□□ -1.47
PRE1YER012W YPL109CQ02981 657 aa5.89□□□□□ -1.47
PRE1YER012W CDA2Q06703 312 aa5.89□□□□□ -1.47
PRE1YER012W VMA4P22203 233 aaKnown RBP5.88□□□□□ -1.47
PRE1YER012W YHL012WP38709 493 aa5.88□□□□□ -1.47
PRE1YER012W ETP1P38748 585 aaKnown RBP5.88□□□□□ -1.47
PRE1YER012W PIC2P40035 300 aa5.88□□□□□ -1.47
PRE1YER012W ADI1Q03677 179 aa5.88□□□□□ -1.47
PRE1YER012W LAP2Q10740 671 aa5.88□□□□□ -1.47
PRE1YER012W YDL177CQ12257 170 aa5.88□□□□□ -1.47
PRE1YER012W HXK1P04806 485 aaKnown RBP5.87□□□□□ -1.47
PRE1YER012W SAM35P14693 329 aa5.87□□□□□ -1.47
PRE1YER012W TSA1P34760 196 aaKnown RBP5.87□□□□□ -1.47
PRE1YER012W RDH54P38086 958 aa5.87□□□□□ -1.47
PRE1YER012W PRP43P53131 767 aaKnown RBP5.87□□□□□ -1.47
PRE1YER012W HSE1P38753 452 aa5.86□□□□□ -1.47
PRE1YER012W QNS1P38795 714 aaKnown RBP5.86□□□□□ -1.47
PRE1YER012W NIT1P40447 199 aa5.86□□□□□ -1.47
PRE1YER012W SEN54Q02825 467 aaPredicted RBP5.86□□□□□ -1.47
PRE1YER012W AIM26P32858 118 aa5.85□□□□□ -1.47
PRE1YER012W ADD66P36040 267 aa5.85□□□□□ -1.47
PRE1YER012W GPB2P39717 880 aa5.85□□□□□ -1.47
PRE1YER012W EST2Q06163 884 aa5.85□□□□□ -1.47
PRE1YER012W SEC20P28791 383 aa5.84□□□□□ -1.47
PRE1YER012W AFG2P32794 780 aa5.84□□□□□ -1.47
PRE1YER012W ORC3P54790 616 aa5.84□□□□□ -1.47
PRE1YER012W HRK1Q08732 759 aaKnown RBP5.84□□□□□ -1.47
PRE1YER012W RCL1Q08096 367 aaPredicted RBP5.83□□□□□ -1.48
PRE1YER012W SEC23P15303 768 aaKnown RBP5.82□□□□□ -1.48
PRE1YER012W MCM2P29469 868 aa5.82□□□□□ -1.48
PRE1YER012W AIM3P38266 947 aaKnown RBP5.82□□□□□ -1.48
PRE1YER012W MRPL22P53881 309 aa5.82□□□□□ -1.48
PRE1YER012W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48 RIP-Chip
PRE1YER012W KIP1P28742 1111 aa5.81□□□□□ -1.48
PRE1YER012W MDL2P33311 773 aa5.81□□□□□ -1.48
PRE1YER012W RPS26AP39938 119 aaKnown RBP5.81□□□□□ -1.48
PRE1YER012W RPS26BP39939 119 aaKnown RBP5.81□□□□□ -1.48
PRE1YER012W MON2P48563 1636 aaPredicted RBP5.81□□□□□ -1.48
PRE1YER012W YSC84P32793 468 aa5.8□□□□□ -1.48
PRE1YER012W THI80P35202 319 aa5.8□□□□□ -1.48
PRE1YER012W TAF1P46677 1066 aa5.8□□□□□ -1.48
PRE1YER012W ROD1Q02805 837 aa5.8□□□□□ -1.48
PRE1YER012W HDA2Q06629 674 aa5.8□□□□□ -1.48
PRE1YER012W PTC5Q12511 572 aa5.8□□□□□ -1.48
PRE1YER012W ATE1P16639 503 aa5.79□□□□□ -1.48
PRE1YER012W ALG3P38179 458 aa5.79□□□□□ -1.48
PRE1YER012W RAT1Q02792 1006 aaKnown RBP5.79□□□□□ -1.48
PRE1YER012W RKM2Q03942 479 aa5.79□□□□□ -1.48
PRE1YER012W PRE9P23638 258 aaKnown RBP5.78□□□□□ -1.48
PRE1YER012W YKL222CP35995 705 aa5.78□□□□□ -1.48
PRE1YER012W VPS53P47061 822 aa5.78□□□□□ -1.48
PRE1YER012W YGR122WP53272 402 aa5.78□□□□□ -1.48
PRE1YER012W RAD2P07276 1031 aa5.77□□□□□ -1.49
PRE1YER012W MRPS18P42847 217 aa5.77□□□□□ -1.49
PRE1YER012W YFL054CP43549 646 aa5.77□□□□□ -1.49
PRE1YER012W POL32P47110 350 aa5.77□□□□□ -1.49
PRE1YER012W FOL2P51601 243 aaKnown RBP5.77□□□□□ -1.49
PRE1YER012W SPR28Q04921 423 aa5.77□□□□□ -1.49
PRE1YER012W ESC8Q08119 714 aa5.77□□□□□ -1.49
PRE1YER012W CYC8P14922 966 aa5.76□□□□□ -1.49
PRE1YER012W RSC58Q07979 502 aa5.76□□□□□ -1.49
PRE1YER012W SPO21Q12411 609 aa5.76□□□□□ -1.49
PRE1YER012W FYV10P40492 516 aa5.75□□□□□ -1.49
PRE1YER012W TAF7Q05021 590 aa5.75□□□□□ -1.49
PRE1YER012W SPS1P08458 490 aa5.74□□□□□ -1.49
PRE1YER012W PRP6P19735 899 aaPredicted RBP5.74□□□□□ -1.49
PRE1YER012W SRO9P25567 434 aaKnown RBP5.74□□□□□ -1.49
PRE1YER012W YCR015CP25616 317 aa5.74□□□□□ -1.49
PRE1YER012W SLD2P34252 453 aa5.74□□□□□ -1.49
PRE1YER012W YML020WQ03722 664 aa5.74□□□□□ -1.49
PRE1YER012W MRL1Q06815 381 aa5.74□□□□□ -1.49
PRE1YER012W YPL277CQ08989 487 aa5.74□□□□□ -1.49
PRE1YER012W MCD1Q12158 566 aa5.74□□□□□ -1.49
PRE1YER012W GCR1P07261 785 aa5.73□□□□□ -1.49
PRE1YER012W MKK2P32491 506 aa5.73□□□□□ -1.49
PRE1YER012W TOD6P34219 525 aa5.73□□□□□ -1.49
PRE1YER012W INO80P53115 1489 aa5.72□□□□□ -1.49
PRE1YER012W COQ4O13525 335 aa5.72□□□□□ -1.49
PRE1YER012W FLR1P38124 548 aa5.72□□□□□ -1.49
PRE1YER012W GIP4P39732 760 aa5.72□□□□□ -1.49
PRE1YER012W HOS3Q02959 697 aaKnown RBP5.72□□□□□ -1.49
PRE1YER012W RPS13P05756 151 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms