RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C HPF1Q05164 967 aa1.76□□□□□ -2.13
SEC3YER008C RPS31P05759 152 aaKnown RBP1.76□□□□□ -2.13
SEC3YER008C PMC1P38929 1173 aaPredicted RBP1.76□□□□□ -2.13
SEC3YER008C RGD2P43556 714 aa1.76□□□□□ -2.13
SEC3YER008C TDA5Q06417 326 aaKnown RBP1.76□□□□□ -2.13
SEC3YER008C YOL098CQ12496 1037 aa1.76□□□□□ -2.13
SEC3YER008C TOP2P06786 1428 aaKnown RBP1.76□□□□□ -2.13
SEC3YER008C FUS1P11710 512 aa1.75□□□□□ -2.13
SEC3YER008C IDI1P15496 288 aa1.75□□□□□ -2.13
SEC3YER008C NMD3P38861 518 aaKnown RBP1.75□□□□□ -2.13
SEC3YER008C SPO71Q03868 1245 aa1.75□□□□□ -2.13
SEC3YER008C YOL057WQ08225 711 aa1.75□□□□□ -2.13
SEC3YER008C MCD1Q12158 566 aa1.75□□□□□ -2.13
SEC3YER008C UFD4P33202 1483 aa1.75□□□□□ -2.13
SEC3YER008C FLP1P03870 423 aa1.75□□□□□ -2.13
SEC3YER008C PPH3P32345 308 aa1.75□□□□□ -2.13
SEC3YER008C FAA3P39002 694 aa1.75□□□□□ -2.13
SEC3YER008C RVS167P39743 482 aaKnown RBP1.75□□□□□ -2.13
SEC3YER008C ALG12P53730 551 aa1.75□□□□□ -2.13
SEC3YER008C LAP2Q10740 671 aa1.75□□□□□ -2.13
SEC3YER008C GDB1Q06625 1536 aa1.75□□□□□ -2.13
SEC3YER008C LTE1P07866 1435 aa1.75□□□□□ -2.13
SEC3YER008C PAN5P38787 379 aa1.75□□□□□ -2.13
SEC3YER008C KIP3P53086 805 aaKnown RBP1.75□□□□□ -2.13
SEC3YER008C YAF9P53930 226 aa1.75□□□□□ -2.13
SEC3YER008C ULP1Q02724 621 aa1.75□□□□□ -2.13
SEC3YER008C SPP382Q06411 708 aaPredicted RBP1.75□□□□□ -2.13
SEC3YER008C SNT2P53127 1403 aa1.75□□□□□ -2.13
SEC3YER008C RSC6P25632 483 aa1.75□□□□□ -2.13
SEC3YER008C TIM54P47045 478 aa1.75□□□□□ -2.13
SEC3YER008C EST2Q06163 884 aa1.75□□□□□ -2.13
SEC3YER008C CDC53Q12018 815 aaKnown RBP1.75□□□□□ -2.13
SEC3YER008C PUS1Q12211 544 aaKnown RBP1.75□□□□□ -2.13
SEC3YER008C OSH2Q12451 1283 aa1.75□□□□□ -2.13
SEC3YER008C TAF2P23255 1407 aa1.74□□□□□ -2.13
SEC3YER008C TY3B-GQ99315 1547 aa1.74□□□□□ -2.13
SEC3YER008C GPM1P00950 247 aaKnown RBP1.74□□□□□ -2.13
SEC3YER008C PHO4P07270 312 aaKnown RBP1.74□□□□□ -2.13
SEC3YER008C RAD2P07276 1031 aa1.74□□□□□ -2.13
SEC3YER008C PDC5P16467 563 aaKnown RBP1.74□□□□□ -2.13
SEC3YER008C UGA4P32837 571 aa1.74□□□□□ -2.13
SEC3YER008C SBE2P42223 864 aaKnown RBP1.74□□□□□ -2.13
SEC3YER008C YJR124CP47159 448 aa1.74□□□□□ -2.13
SEC3YER008C YJR142WP47173 342 aa1.74□□□□□ -2.13
SEC3YER008C UTP22P53254 1237 aaPredicted RBP1.74□□□□□ -2.13
SEC3YER008C YMR187CQ03236 431 aa1.74□□□□□ -2.13
SEC3YER008C DOT1Q04089 582 aaKnown RBP1.74□□□□□ -2.13
SEC3YER008C GAS5Q08193 484 aa1.74□□□□□ -2.13
SEC3YER008C YKL069WP36088 180 aa1.74□□□□□ -2.13
SEC3YER008C PBP2P38151 413 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
SEC3YER008C PRY1P47032 299 aa1.74□□□□□ -2.13
SEC3YER008C NUT1P53114 1132 aa1.74□□□□□ -2.13
SEC3YER008C ELG1Q12050 791 aa1.74□□□□□ -2.13
SEC3YER008C DNF3Q12674 1656 aa1.74□□□□□ -2.13
SEC3YER008C MSH3P25336 1018 aa1.74□□□□□ -2.13
SEC3YER008C TIM23P32897 222 aa1.74□□□□□ -2.13
SEC3YER008C TOM20P35180 183 aa1.74□□□□□ -2.13
SEC3YER008C INP51P40559 946 aaKnown RBP1.74□□□□□ -2.13
SEC3YER008C AIM21P40563 679 aa1.74□□□□□ -2.13
SEC3YER008C SPO74P45819 413 aa1.74□□□□□ -2.13
SEC3YER008C SSF2Q12153 453 aaPredicted RBP1.74□□□□□ -2.13
SEC3YER008C VTH1P40438 1549 aa1.73□□□□□ -2.13
SEC3YER008C VTH2P40890 1549 aa1.73□□□□□ -2.13
SEC3YER008C SMC4Q12267 1418 aa1.73□□□□□ -2.13
SEC3YER008C MRP10O75012 95 aa1.73□□□□□ -2.13
SEC3YER008C YAR028WP39548 234 aa1.73□□□□□ -2.13
SEC3YER008C HUL5P53119 910 aa1.73□□□□□ -2.13
SEC3YER008C TPP1Q03796 238 aa1.73□□□□□ -2.13
SEC3YER008C SYT1Q06836 1226 aa1.73□□□□□ -2.13
SEC3YER008C APC11Q12157 165 aa1.73□□□□□ -2.13
SEC3YER008C YDR461C-AQ2V2P7 80 aa1.73□□□□□ -2.13
SEC3YER008C NNF1P47149 201 aa1.73□□□□□ -2.13
SEC3YER008C PTC5Q12511 572 aa1.73□□□□□ -2.13
SEC3YER008C YRF1-2P40105 1681 aa1.73□□□□□ -2.13
SEC3YER008C TOP1P04786 769 aa1.73□□□□□ -2.13
SEC3YER008C ERR1P0CX10 437 aa1.73□□□□□ -2.13
SEC3YER008C ERR2P0CX11 437 aa1.73□□□□□ -2.13
SEC3YER008C ARE1P25628 610 aa1.73□□□□□ -2.13
SEC3YER008C MDJ1P35191 511 aa1.73□□□□□ -2.13
SEC3YER008C ACO2P39533 789 aa1.73□□□□□ -2.13
SEC3YER008C YEN1P40028 759 aa1.73□□□□□ -2.13
SEC3YER008C ADI1Q03677 179 aa1.73□□□□□ -2.13
SEC3YER008C YPR196WQ06595 470 aa1.73□□□□□ -2.13
SEC3YER008C GLO4Q12320 285 aa1.73□□□□□ -2.13
SEC3YER008C DPH6Q12429 685 aa1.73□□□□□ -2.13
SEC3YER008C SCP160P06105 1222 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13 RIP-Chip
SEC3YER008C NPR1P22211 790 aa1.72□□□□□ -2.13
SEC3YER008C TRK2P28584 889 aa1.72□□□□□ -2.13
SEC3YER008C LIP5P32875 414 aa1.72□□□□□ -2.13
SEC3YER008C KTR2P33550 425 aa1.72□□□□□ -2.13
SEC3YER008C WHI3P34761 661 aaKnown RBP1.72□□□□□ -2.13
SEC3YER008C GPB2P39717 880 aa1.72□□□□□ -2.13
SEC3YER008C YJR120WP47157 116 aa1.72□□□□□ -2.13
SEC3YER008C PDR10P51533 1564 aa1.72□□□□□ -2.13
SEC3YER008C YGR122WP53272 402 aa1.72□□□□□ -2.13
SEC3YER008C VPS16Q03308 798 aa1.72□□□□□ -2.13
SEC3YER008C YLR225CQ05948 407 aaKnown RBP1.72□□□□□ -2.13
SEC3YER008C TDA6Q06466 467 aa1.72□□□□□ -2.13
SEC3YER008C VPS15P22219 1454 aa1.72□□□□□ -2.13
SEC3YER008C RPC31P17890 251 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 1196.6 ms