RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS120	YDR407C	LSC2	P53312	427 aa		4.05	□□□□□ -1.76
TRS120	YDR407C	ERO1	Q03103	563 aa		4.05	□□□□□ -1.76
TRS120	YDR407C	YML119W	Q03208	357 aa		4.05	□□□□□ -1.76
TRS120	YDR407C	SFH1	Q06168	426 aa		4.05	□□□□□ -1.76
TRS120	YDR407C	DSE3	Q08729	430 aa		4.05	□□□□□ -1.76
TRS120	YDR407C	PSF3	Q12146	194 aa		4.05	□□□□□ -1.76
TRS120	YDR407C	YET1	P35723	206 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	NUP82	P40368	713 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	MSH4	P40965	878 aa	Predicted RBP	4.04	□□□□□ -1.76
TRS120	YDR407C	EBS1	Q03466	884 aa	Known RBP	4.04	□□□□□ -1.76
TRS120	YDR407C	UBX2	Q04228	584 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	SNU66	Q12420	587 aa	Predicted RBP	4.04	□□□□□ -1.76
TRS120	YDR407C	DAL7	P21826	554 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	CTM1	P38818	585 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	SEC9	P40357	651 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	BUD6	P41697	788 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	NCS2	P53923	493 aa	Predicted RBP	4.04	□□□□□ -1.76
TRS120	YDR407C	SES1	P07284	462 aa	Known RBP	4.04	□□□□□ -1.76
TRS120	YDR407C	PEP5	P12868	1029 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	BCH2	P36122	765 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	APP1	P53933	587 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	MDM1	Q01846	1127 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	PRP42	Q03776	544 aa	Known RBP	4.04	□□□□□ -1.76
TRS120	YDR407C	WHI4	Q07655	649 aa	Known RBP	4.04	□□□□□ -1.76
TRS120	YDR407C	YOR111W	Q99210	232 aa		4.04	□□□□□ -1.76
TRS120	YDR407C	SUP35	P05453	685 aa	Known RBP	4.03	□□□□□ -1.76
TRS120	YDR407C	ERT1	P38140	529 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	MAL31	P38156	614 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	SET4	P42948	560 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	GYL1	Q04322	720 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	RGA2	Q06407	1009 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	ERG11	P10614	530 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	PRP22	P24384	1145 aa	Known RBP	4.03	□□□□□ -1.76
TRS120	YDR407C	BYE1	P36106	594 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	UGA2	P38067	497 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	PTC4	P38089	393 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	CCT4	P39078	528 aa	Known RBP	4.03	□□□□□ -1.76
TRS120	YDR407C	GTT3	P39996	337 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	YJR079W	P47126	109 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	SLT2	Q00772	484 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	YMR074C	Q04773	145 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	INM2	Q05533	292 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	TIP41	Q12199	356 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	SFI1	Q12369	946 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	PDC1	P06169	563 aa	Known RBP	4.03	□□□□□ -1.76
TRS120	YDR407C	UGA4	P32837	571 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	PFF1	P38244	976 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	BRE2	P43132	505 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	VTC2	P43585	828 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	YJR039W	P47107	1121 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	VAC14	Q06708	880 aa		4.03	□□□□□ -1.76
TRS120	YDR407C	FAL1	Q12099	399 aa	Known RBP	4.03	□□□□□ -1.76
TRS120	YDR407C	YFH7	P43591	353 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	LSC1	P53598	329 aa	Known RBP	4.02	□□□□□ -1.77
TRS120	YDR407C	SYH1	Q02875	849 aa	Known RBP	4.02	□□□□□ -1.77
TRS120	YDR407C	YLR326W	Q06170	240 aa	Known RBP	4.02	□□□□□ -1.77
TRS120	YDR407C	MAG2	Q06436	670 aa	Known RBP	4.02	□□□□□ -1.77
TRS120	YDR407C	CLF1	Q12309	687 aa	Predicted RBP	4.02	□□□□□ -1.77
TRS120	YDR407C	ARG82	P07250	355 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	SPO12	P17123	173 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	YIL055C	P40523	627 aa	Known RBP	4.02	□□□□□ -1.77
TRS120	YDR407C	VPS70	P47161	811 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	UFD2	P54860	961 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	GFD1	Q04839	188 aa	Known RBP	4.02	□□□□□ -1.77
TRS120	YDR407C	ESC2	Q06340	456 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	YDL057W	Q07379	328 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	ABP140	Q08641	628 aa	Known RBP	4.02	□□□□□ -1.77
TRS120	YDR407C	NUC1	P08466	329 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	STO1	P34160	861 aa	Known RBP	4.02	□□□□□ -1.77
TRS120	YDR407C	BOI1	P38041	980 aa	Known RBP	4.02	□□□□□ -1.77
TRS120	YDR407C	YSW1	P38280	609 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	RGD1	P38339	666 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	MIC19	P43594	170 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	YMR102C	Q03177	834 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	YAP7	Q08182	245 aa		4.02	□□□□□ -1.77
TRS120	YDR407C	HXK1	P04806	485 aa	Known RBP	4.01	□□□□□ -1.77
TRS120	YDR407C	CNS1	P33313	385 aa		4.01	□□□□□ -1.77
TRS120	YDR407C	SMF1	P38925	575 aa		4.01	□□□□□ -1.77
TRS120	YDR407C	VPS41	P38959	992 aa		4.01	□□□□□ -1.77
TRS120	YDR407C	TIF4631	P39935	952 aa	Known RBP	4.01	□□□□□ -1.77
TRS120	YDR407C	TIF4632	P39936	914 aa	Known RBP	4.01	□□□□□ -1.77
TRS120	YDR407C	YOL075C	Q08234	1294 aa		4.01	□□□□□ -1.77
TRS120	YDR407C	RPS6A	P0CX37	236 aa	Known RBP	4.01	□□□□□ -1.77
TRS120	YDR407C	RPS6B	P0CX38	236 aa	Predicted RBP	4.01	□□□□□ -1.77
TRS120	YDR407C	PRI1	P10363	409 aa		4.01	□□□□□ -1.77
TRS120	YDR407C	SEC65	P29478	273 aa		4.01	□□□□□ -1.77
TRS120	YDR407C	ESBP6	P53918	673 aa		4.01	□□□□□ -1.77
TRS120	YDR407C	STE23	Q06010	1027 aa		4.01	□□□□□ -1.77
TRS120	YDR407C	AFT2	Q08957	416 aa		4.01	□□□□□ -1.77
TRS120	YDR407C	CDC53	Q12018	815 aa	Known RBP	4.01	□□□□□ -1.77
TRS120	YDR407C	GAA1	P39012	614 aa		4.01	□□□□□ -1.77
TRS120	YDR407C	ATG3	P40344	310 aa		4.01	□□□□□ -1.77
TRS120	YDR407C	HIS4	P00815	799 aa	Known RBP	4	□□□□□ -1.77
TRS120	YDR407C	MAK11	P20484	414 aa	Known RBP	4	□□□□□ -1.77
TRS120	YDR407C	PAP1	P29468	568 aa	Known RBP	4	□□□□□ -1.77
TRS120	YDR407C	XRS2	P33301	854 aa		4	□□□□□ -1.77
TRS120	YDR407C	CCM1	P48237	864 aa	Predicted RBP	4	□□□□□ -1.77
TRS120	YDR407C	TDA9	Q04545	1251 aa		4	□□□□□ -1.77
TRS120	YDR407C	SRO9	P25567	434 aa	Known RBP	4	□□□□□ -1.77
TRS120	YDR407C	CDC15	P27636	974 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms