RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W SHM1P37292 490 aaPredicted RBP6.9□□□□□ -1.3
SPT3YDR392W MRPL16P38064 232 aa6.9□□□□□ -1.3
SPT3YDR392W BUD27P43573 796 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
SPT3YDR392W CCT8P47079 568 aaKnown RBP6.9□□□□□ -1.3
SPT3YDR392W SEN54Q02825 467 aaPredicted RBP6.9□□□□□ -1.3
SPT3YDR392W PDC6P26263 563 aaKnown RBP6.89□□□□□ -1.31
SPT3YDR392W PAF1P38351 445 aa6.89□□□□□ -1.31
SPT3YDR392W AIM9P40053 627 aaKnown RBP6.89□□□□□ -1.31
SPT3YDR392W YPQ2Q06328 317 aa6.89□□□□□ -1.31
SPT3YDR392W ERG7P38604 731 aa6.88□□□□□ -1.31
SPT3YDR392W STM1P39015 273 aaKnown RBP6.88□□□□□ -1.31
SPT3YDR392W PSH1Q12161 406 aa6.88□□□□□ -1.31
SPT3YDR392W GPM1P00950 247 aaKnown RBP6.87□□□□□ -1.31
SPT3YDR392W RDS2P19541 446 aaKnown RBP6.87□□□□□ -1.31
SPT3YDR392W SKN7P38889 622 aa6.87□□□□□ -1.31
SPT3YDR392W AIM21P40563 679 aa6.87□□□□□ -1.31
SPT3YDR392W SBE2P42223 864 aaKnown RBP6.87□□□□□ -1.31
SPT3YDR392W YMR187CQ03236 431 aa6.87□□□□□ -1.31
SPT3YDR392W TDA6Q06466 467 aa6.87□□□□□ -1.31
SPT3YDR392W ICL2Q12031 575 aa6.87□□□□□ -1.31
SPT3YDR392W RPP1AP05318 106 aaPredicted RBP6.86□□□□□ -1.31
SPT3YDR392W RPS31P05759 152 aaKnown RBP6.85□□□□□ -1.31
SPT3YDR392W RPS6AP0CX37 236 aaKnown RBP6.85□□□□□ -1.31
SPT3YDR392W RPS6BP0CX38 236 aaPredicted RBP6.85□□□□□ -1.31
SPT3YDR392W MCM1P11746 286 aa6.85□□□□□ -1.31
SPT3YDR392W GAL2P13181 574 aa6.85□□□□□ -1.31
SPT3YDR392W MCX1P38323 520 aaPredicted RBP6.85□□□□□ -1.31
SPT3YDR392W MRX10Q05648 414 aa6.85□□□□□ -1.31
SPT3YDR392W RRG1Q12167 365 aaPredicted RBP6.85□□□□□ -1.31
SPT3YDR392W NTH2P35172 780 aa6.84□□□□□ -1.31
SPT3YDR392W MET1P36150 593 aa6.84□□□□□ -1.31
SPT3YDR392W INP54Q08227 384 aaKnown RBP6.84□□□□□ -1.31
SPT3YDR392W MCM3P24279 971 aaKnown RBP6.83□□□□□ -1.32
SPT3YDR392W SER1P33330 395 aaKnown RBP6.83□□□□□ -1.32
SPT3YDR392W BIM1P40013 344 aa6.83□□□□□ -1.32
SPT3YDR392W MCM6P53091 1017 aaKnown RBP6.83□□□□□ -1.32
SPT3YDR392W UBP16Q02863 499 aa6.83□□□□□ -1.32
SPT3YDR392W TSC13Q99190 310 aa6.83□□□□□ -1.32
SPT3YDR392W LEU1P07264 779 aaKnown RBP6.82□□□□□ -1.32
SPT3YDR392W KNS1P32350 737 aaPredicted RBP6.82□□□□□ -1.32
SPT3YDR392W BOI2P39969 1040 aa6.82□□□□□ -1.32
SPT3YDR392W YTA6P40328 754 aa6.82□□□□□ -1.32
SPT3YDR392W RPL34BP40525 121 aaKnown RBP6.82□□□□□ -1.32
SPT3YDR392W OYE3P41816 400 aaPredicted RBP6.82□□□□□ -1.32
SPT3YDR392W MDM20Q12387 796 aaKnown RBP6.82□□□□□ -1.32
SPT3YDR392W ENO1P00924 437 aaKnown RBP6.81□□□□□ -1.32
SPT3YDR392W TIF1P10081 395 aaKnown RBP6.81□□□□□ -1.32
SPT3YDR392W FRD1P32614 470 aaKnown RBP6.81□□□□□ -1.32
SPT3YDR392W TY3A-GQ12173 290 aa6.81□□□□□ -1.32
SPT3YDR392W TY3A-IQ99219 290 aa6.81□□□□□ -1.32
SPT3YDR392W SBP1P10080 294 aaKnown RBP6.8□□□□□ -1.32
SPT3YDR392W PDI1P17967 522 aaKnown RBP6.8□□□□□ -1.32
SPT3YDR392W ATG32P40458 529 aa6.8□□□□□ -1.32
SPT3YDR392W MDG1P53885 366 aa6.8□□□□□ -1.32
SPT3YDR392W GIN4Q12263 1142 aa6.8□□□□□ -1.32
SPT3YDR392W YML133CQ03099 1374 aa6.8□□□□□ -1.32
SPT3YDR392W PDC5P16467 563 aaKnown RBP6.79□□□□□ -1.32
SPT3YDR392W TY1A-DR2Q03964 440 aaKnown RBP6.79□□□□□ -1.32
SPT3YDR392W SUT2Q12286 268 aa6.79□□□□□ -1.32
SPT3YDR392W YFR016CP43597 1233 aaKnown RBP6.78□□□□□ -1.32
SPT3YDR392W RSC8P43609 557 aaKnown RBP6.78□□□□□ -1.32
SPT3YDR392W RGP1P16664 663 aa6.77□□□□□ -1.33
SPT3YDR392W HXT5P38695 592 aa6.77□□□□□ -1.33
SPT3YDR392W NIT1P40447 199 aa6.77□□□□□ -1.33
SPT3YDR392W ACC1Q00955 2233 aaKnown RBP6.76□□□□□ -1.33
SPT3YDR392W PEP12P32854 288 aa6.76□□□□□ -1.33
SPT3YDR392W YNL165WP53891 406 aa6.76□□□□□ -1.33
SPT3YDR392W ECM16Q04217 1267 aaKnown RBP6.76□□□□□ -1.33
SPT3YDR392W GAS5Q08193 484 aa6.76□□□□□ -1.33
SPT3YDR392W CYT1P07143 309 aa6.75□□□□□ -1.33
SPT3YDR392W GRS1P38088 690 aaKnown RBP6.75□□□□□ -1.33
SPT3YDR392W AFG3P39925 761 aa6.75□□□□□ -1.33
SPT3YDR392W NRD1P53617 575 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
SPT3YDR392W SYF1Q04048 859 aaPredicted RBP6.75□□□□□ -1.33
SPT3YDR392W Q0182Q9ZZW1 134 aa6.75□□□□□ -1.33
SPT3YDR392W YCK2P23292 546 aaKnown RBP6.74□□□□□ -1.33
SPT3YDR392W JHD1P40034 492 aa6.74□□□□□ -1.33
SPT3YDR392W NET1P47035 1189 aa6.74□□□□□ -1.33
SPT3YDR392W MLF3P32047 452 aa6.73□□□□□ -1.33
SPT3YDR392W HEH2Q03281 663 aa6.73□□□□□ -1.33
SPT3YDR392W HAP4P14064 554 aa6.72□□□□□ -1.33
SPT3YDR392W CDC60P26637 1090 aaKnown RBP6.72□□□□□ -1.33
SPT3YDR392W YJR107WP47145 328 aa6.72□□□□□ -1.33
SPT3YDR392W BRE5P53741 515 aaKnown RBP6.72□□□□□ -1.33
SPT3YDR392W YDR215CQ12240 137 aa6.72□□□□□ -1.33
SPT3YDR392W FLO11P08640 1367 aa6.71□□□□□ -1.33
SPT3YDR392W PHO87P25360 923 aa6.71□□□□□ -1.34
SPT3YDR392W SIS2P36024 562 aa6.71□□□□□ -1.34
SPT3YDR392W YGL082WP53155 381 aa6.71□□□□□ -1.34
SPT3YDR392W RMT2Q03305 412 aa6.71□□□□□ -1.34
SPT3YDR392W UTP4Q06679 776 aaKnown RBP6.71□□□□□ -1.34
SPT3YDR392W ACS2P52910 683 aaKnown RBP6.7□□□□□ -1.34
SPT3YDR392W ESL2P36168 1195 aa6.69□□□□□ -1.34
SPT3YDR392W TAT1P38085 619 aa6.69□□□□□ -1.34
SPT3YDR392W SLN1P39928 1220 aaPredicted RBP6.69□□□□□ -1.34
SPT3YDR392W GAS4Q08271 471 aa6.69□□□□□ -1.34
SPT3YDR392W PFK2P16862 959 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
SPT3YDR392W KTR2P33550 425 aa6.68□□□□□ -1.34
SPT3YDR392W SCD5P34758 872 aa6.68□□□□□ -1.34
SPT3YDR392W LSB6P42951 607 aa6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms