RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W PSE1P32337 1089 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W CIC1P38779 376 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W PAN5P38787 379 aa1.95□□□□□ -2.1
CFT1YDR301W RRP8P38961 392 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W GPB2P39717 880 aa1.95□□□□□ -2.1
CFT1YDR301W VAB2P40003 282 aa1.95□□□□□ -2.1
CFT1YDR301W TPM2P40414 161 aa1.95□□□□□ -2.1
CFT1YDR301W CIR1P42940 261 aa1.95□□□□□ -2.1
CFT1YDR301W SPH1Q06160 661 aa1.95□□□□□ -2.1
CFT1YDR301W YDL124WQ07551 312 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W TUB2P02557 457 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W TAF13P11747 167 aa1.95□□□□□ -2.1
CFT1YDR301W SEC8P32855 1065 aa1.95□□□□□ -2.1
CFT1YDR301W RPT3P33298 428 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W MPE1P35728 441 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W PCS60P38137 543 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
CFT1YDR301W CSM2P40465 213 aa1.95□□□□□ -2.1
CFT1YDR301W PCI8P40512 444 aa1.95□□□□□ -2.1
CFT1YDR301W NPA3P47122 385 aa1.95□□□□□ -2.1
CFT1YDR301W PTA1Q01329 785 aaPredicted RBP1.95□□□□□ -2.1
CFT1YDR301W YML020WQ03722 664 aa1.95□□□□□ -2.1
CFT1YDR301W MRD1Q06106 887 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W YLR326WQ06170 240 aaKnown RBP1.95□□□□□ -2.1
CFT1YDR301W UBX5Q06682 500 aa1.95□□□□□ -2.1
CFT1YDR301W GIN4Q12263 1142 aa1.95□□□□□ -2.1
CFT1YDR301W CPA2P03965 1118 aaKnown RBP1.94□□□□□ -2.1
CFT1YDR301W TOP1P04786 769 aa1.94□□□□□ -2.1
CFT1YDR301W PFK2P16862 959 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
CFT1YDR301W RIT1P23796 513 aa1.94□□□□□ -2.1
CFT1YDR301W MRM1P25270 412 aa1.94□□□□□ -2.1
CFT1YDR301W MSP1P28737 362 aa1.94□□□□□ -2.1
CFT1YDR301W PRX1P34227 261 aaKnown RBP1.94□□□□□ -2.1
CFT1YDR301W YBL028CP38202 106 aa1.94□□□□□ -2.1
CFT1YDR301W VPS45P38932 577 aa1.94□□□□□ -2.1
CFT1YDR301W ACA1P39970 489 aa1.94□□□□□ -2.1
CFT1YDR301W MXR1P40029 184 aa1.94□□□□□ -2.1
CFT1YDR301W NUP82P40368 713 aa1.94□□□□□ -2.1
CFT1YDR301W YGR153WP48238 217 aa1.94□□□□□ -2.1
CFT1YDR301W YPT11P48559 417 aa1.94□□□□□ -2.1
CFT1YDR301W VPS4P52917 437 aa1.94□□□□□ -2.1
CFT1YDR301W OYE2Q03558 400 aaKnown RBP1.94□□□□□ -2.1
CFT1YDR301W RBA50Q04418 439 aa1.94□□□□□ -2.1
CFT1YDR301W DCS2Q12123 353 aa1.94□□□□□ -2.1
CFT1YDR301W GET3Q12154 354 aaKnown RBP1.94□□□□□ -2.1
CFT1YDR301W MET6P05694 767 aaKnown RBP1.94□□□□□ -2.1
CFT1YDR301W PKC1P24583 1151 aa1.94□□□□□ -2.1
CFT1YDR301W RPL8BP29453 256 aaKnown RBP1.94□□□□□ -2.1
CFT1YDR301W CHS3P29465 1165 aa1.94□□□□□ -2.1
CFT1YDR301W MAL33P38157 468 aa1.94□□□□□ -2.1
CFT1YDR301W KIC1P38692 1080 aa1.94□□□□□ -2.1
CFT1YDR301W RSC30P38781 883 aa1.94□□□□□ -2.1
CFT1YDR301W CTF18P49956 741 aa1.94□□□□□ -2.1
CFT1YDR301W RTC4P53850 401 aa1.94□□□□□ -2.1
CFT1YDR301W MFM1Q02783 413 aa1.94□□□□□ -2.1
CFT1YDR301W VPS30Q02948 557 aa1.94□□□□□ -2.1
CFT1YDR301W SVF1Q05515 481 aa1.94□□□□□ -2.1
CFT1YDR301W THS1P04801 734 aaKnown RBP1.94□□□□□ -2.1
CFT1YDR301W BIK1P11709 440 aa1.94□□□□□ -2.1
CFT1YDR301W HIR1P32479 840 aa1.94□□□□□ -2.1
CFT1YDR301W PXL1P36166 706 aa1.94□□□□□ -2.1
CFT1YDR301W APE3P37302 537 aaKnown RBP1.94□□□□□ -2.1
CFT1YDR301W ERG7P38604 731 aa1.94□□□□□ -2.1
CFT1YDR301W BCD1P38772 366 aa1.94□□□□□ -2.1
CFT1YDR301W AKR1P39010 764 aa1.94□□□□□ -2.1
CFT1YDR301W VPS8P39702 1274 aa1.94□□□□□ -2.1
CFT1YDR301W PEX14P53112 341 aa1.94□□□□□ -2.1
CFT1YDR301W LSB1P53281 241 aa1.94□□□□□ -2.1
CFT1YDR301W SEC5P89102 971 aa1.94□□□□□ -2.1
CFT1YDR301W VPS20Q04272 221 aa1.94□□□□□ -2.1
CFT1YDR301W YDR341CQ05506 607 aaKnown RBP1.94□□□□□ -2.1
CFT1YDR301W PEX19Q07418 342 aa1.94□□□□□ -2.1
CFT1YDR301W PTC5Q12511 572 aa1.94□□□□□ -2.1
CFT1YDR301W YOR111WQ99210 232 aa1.94□□□□□ -2.1
CFT1YDR301W CDC19P00549 500 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W GAP1P19145 602 aaPredicted RBP1.93□□□□□ -2.1
CFT1YDR301W VPS29P38759 282 aa1.93□□□□□ -2.1
CFT1YDR301W RPN10P38886 268 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W VHR2P40041 505 aa1.93□□□□□ -2.1
CFT1YDR301W SLX8P40072 274 aa1.93□□□□□ -2.1
CFT1YDR301W RPL34BP40525 121 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W SPR3P41901 512 aa1.93□□□□□ -2.1
CFT1YDR301W YMR1P47147 688 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
CFT1YDR301W YGR125WP53273 1036 aa1.93□□□□□ -2.1
CFT1YDR301W HDA1P53973 706 aa1.93□□□□□ -2.1
CFT1YDR301W RMD1Q03441 430 aa1.93□□□□□ -2.1
CFT1YDR301W YML037CQ03703 340 aa1.93□□□□□ -2.1
CFT1YDR301W WHI4Q07655 649 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W RAD18P10862 487 aa1.93□□□□□ -2.1
CFT1YDR301W PRP22P24384 1145 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W ROX1P25042 368 aa1.93□□□□□ -2.1
CFT1YDR301W YDJ1P25491 409 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W CDC60P26637 1090 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W COQ8P27697 501 aa1.93□□□□□ -2.1
CFT1YDR301W HEM3P28789 327 aa1.93□□□□□ -2.1
CFT1YDR301W YKT6P36015 200 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W STT3P39007 718 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W GSM1P42950 618 aa1.93□□□□□ -2.1
CFT1YDR301W CNM67P53865 581 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W TIF6Q12522 245 aaKnown RBP1.93□□□□□ -2.1
CFT1YDR301W PGA3Q12746 312 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms