RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C PMC1P38929 1173 aaPredicted RBP2.57□□□□□ -2
SSD1YDR293C TYW3P53177 273 aa2.57□□□□□ -2
SSD1YDR293C VPS72Q03388 795 aa2.57□□□□□ -2
SSD1YDR293C MRL1Q06815 381 aa2.57□□□□□ -2
SSD1YDR293C GAS4Q08271 471 aa2.57□□□□□ -2
SSD1YDR293C OXR1Q08952 273 aa2.57□□□□□ -2
SSD1YDR293C DLD1P32891 587 aa2.57□□□□□ -2
SSD1YDR293C RFC1P38630 861 aaKnown RBP2.57□□□□□ -2
SSD1YDR293C YBP2P53169 641 aa2.57□□□□□ -2
SSD1YDR293C RTC4P53850 401 aa2.57□□□□□ -2
SSD1YDR293C CSI1Q04368 295 aa2.57□□□□□ -2
SSD1YDR293C SAM3Q08986 587 aa2.57□□□□□ -2
SSD1YDR293C CEX1Q12453 761 aa2.57□□□□□ -2
SSD1YDR293C UTP10P42945 1769 aaKnown RBP2.56□□□□□ -2
SSD1YDR293C COQ4O13525 335 aa2.56□□□□□ -2
SSD1YDR293C UBP1P25037 809 aa2.56□□□□□ -2
SSD1YDR293C ARE1P25628 610 aa2.56□□□□□ -2
SSD1YDR293C YKT6P36015 200 aaKnown RBP2.56□□□□□ -2
SSD1YDR293C SAP30P38429 201 aa2.56□□□□□ -2
SSD1YDR293C OSW7P43611 510 aa2.56□□□□□ -2
SSD1YDR293C BDP1P46678 594 aa2.56□□□□□ -2
SSD1YDR293C SNU66Q12420 587 aaPredicted RBP2.56□□□□□ -2
SSD1YDR293C RPL19AP0CX82 189 aaKnown RBP2.56□□□□□ -2
SSD1YDR293C RPL19BP0CX83 189 aaPredicted RBP2.56□□□□□ -2
SSD1YDR293C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
SSD1YDR293C TBS1P38114 1094 aa2.56□□□□□ -2
SSD1YDR293C ECM21P38167 1117 aaKnown RBP2.56□□□□□ -2
SSD1YDR293C NIT1P40447 199 aa2.56□□□□□ -2
SSD1YDR293C UTP22P53254 1237 aaPredicted RBP2.56□□□□□ -2
SSD1YDR293C INP54Q08227 384 aaKnown RBP2.56□□□□□ -2
SSD1YDR293C AI4P03878 556 aa2.56□□□□□ -2
SSD1YDR293C PET111P08468 800 aa2.56□□□□□ -2
SSD1YDR293C CLN2P20438 545 aa2.56□□□□□ -2
SSD1YDR293C CBP3P21560 335 aa2.56□□□□□ -2
SSD1YDR293C NFU1P32860 256 aa2.56□□□□□ -2
SSD1YDR293C UBP12P39538 1254 aa2.56□□□□□ -2
SSD1YDR293C ATG3P40344 310 aa2.56□□□□□ -2
SSD1YDR293C YJR120WP47157 116 aa2.56□□□□□ -2
SSD1YDR293C YKE2P52553 114 aa2.56□□□□□ -2
SSD1YDR293C CTR9P89105 1077 aa2.56□□□□□ -2
SSD1YDR293C ISU2Q12056 156 aa2.56□□□□□ -2
SSD1YDR293C PRP45P28004 379 aaPredicted RBP2.55□□□□□ -2
SSD1YDR293C RRP1P35178 278 aaPredicted RBP2.55□□□□□ -2
SSD1YDR293C MIC60P36112 540 aa2.55□□□□□ -2
SSD1YDR293C SMC3P47037 1230 aa2.55□□□□□ -2
SSD1YDR293C HLJ1P48353 224 aa2.55□□□□□ -2
SSD1YDR293C YGL242CP53066 181 aa2.55□□□□□ -2
SSD1YDR293C RAT1Q02792 1006 aaKnown RBP2.55□□□□□ -2
SSD1YDR293C DFG5Q05031 458 aa2.55□□□□□ -2
SSD1YDR293C POM152P39685 1337 aa2.55□□□□□ -2
SSD1YDR293C SSB1P11484 613 aaKnown RBP2.55□□□□□ -2
SSD1YDR293C OSM1P21375 501 aaKnown RBP2.55□□□□□ -2
SSD1YDR293C RPN12P32496 274 aa2.55□□□□□ -2
SSD1YDR293C UTR2P32623 467 aa2.55□□□□□ -2
SSD1YDR293C ABD1P32783 436 aaPredicted RBP2.55□□□□□ -2
SSD1YDR293C YBR197CP38306 217 aa2.55□□□□□ -2
SSD1YDR293C SSB2P40150 613 aaKnown RBP2.55□□□□□ -2
SSD1YDR293C YNR063WP53749 607 aa2.55□□□□□ -2
SSD1YDR293C TRS120Q04183 1289 aa2.55□□□□□ -2
SSD1YDR293C YLR225CQ05948 407 aaKnown RBP2.55□□□□□ -2
SSD1YDR293C NOC3Q07896 663 aaPredicted RBP2.55□□□□□ -2
SSD1YDR293C YPL150WQ12152 901 aa2.55□□□□□ -2
SSD1YDR293C SUV3P32580 737 aa2.55□□□□□ -2
SSD1YDR293C YEL043WP32618 956 aa2.55□□□□□ -2
SSD1YDR293C PBY1P38254 753 aa2.55□□□□□ -2
SSD1YDR293C PPX1P38698 397 aa2.55□□□□□ -2
SSD1YDR293C CRG1P38892 291 aaRIP-Chip data2.55□□□□□ -2not detected
SSD1YDR293C CCT5P40413 562 aaKnown RBP2.55□□□□□ -2
SSD1YDR293C MSH4P40965 878 aaPredicted RBP2.55□□□□□ -2
SSD1YDR293C SPO1P53541 631 aa2.55□□□□□ -2
SSD1YDR293C RNT1Q02555 471 aa2.55□□□□□ -2
SSD1YDR293C PDC1P06169 563 aaKnown RBP2.54□□□□□ -2
SSD1YDR293C SWI5P08153 709 aa2.54□□□□□ -2
SSD1YDR293C MCM3P24279 971 aaKnown RBP2.54□□□□□ -2
SSD1YDR293C DSS1P39112 969 aa2.54□□□□□ -2
SSD1YDR293C PXA1P41909 870 aa2.54□□□□□ -2
SSD1YDR293C YJL181WP46987 611 aa2.54□□□□□ -2
SSD1YDR293C ELG1Q12050 791 aa2.54□□□□□ -2
SSD1YDR293C TAH18Q12181 623 aa2.54□□□□□ -2
SSD1YDR293C OSH2Q12451 1283 aa2.54□□□□□ -2
SSD1YDR293C DDP1Q99321 188 aaKnown RBP2.54□□□□□ -2
SSD1YDR293C TOP1P04786 769 aa2.54□□□□□ -2
SSD1YDR293C YKL133CP36066 463 aa2.54□□□□□ -2
SSD1YDR293C TPM2P40414 161 aa2.54□□□□□ -2
SSD1YDR293C CEP3P40969 608 aa2.54□□□□□ -2
SSD1YDR293C RSM26P47141 266 aa2.54□□□□□ -2
SSD1YDR293C PEX13P80667 386 aa2.54□□□□□ -2
SSD1YDR293C SPP1Q03012 353 aa2.54□□□□□ -2
SSD1YDR293C MSB4Q12317 492 aa2.54□□□□□ -2
SSD1YDR293C STI1P15705 589 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
SSD1YDR293C MKS1P34072 584 aa2.54□□□□□ -2
SSD1YDR293C YBR284WP38150 797 aa2.54□□□□□ -2
SSD1YDR293C SGM1P47166 707 aa2.54□□□□□ -2
SSD1YDR293C VPS60Q03390 229 aa2.54□□□□□ -2
SSD1YDR293C YCG1Q06680 1035 aa2.54□□□□□ -2
SSD1YDR293C YRF1-3P0CX14 1859 aa2.54□□□□□ -2
SSD1YDR293C YRF1-7P0CX15 1859 aa2.54□□□□□ -2
SSD1YDR293C YRF1-6P53819 1859 aa2.54□□□□□ -2
SSD1YDR293C SPT2P06843 333 aaPredicted RBP2.53□□□□□ -2
SSD1YDR293C MATALPHA2P0CY08 210 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms