RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W MFB1Q04922 465 aa2.56□□□□□ -2
SIR4YDR227W PNP1Q05788 311 aa2.56□□□□□ -2
SIR4YDR227W LAP2Q10740 671 aa2.56□□□□□ -2
SIR4YDR227W TMA17Q12513 150 aa2.56□□□□□ -2
SIR4YDR227W SAC3P46674 1301 aa2.56□□□□□ -2
SIR4YDR227W IRE1P32361 1115 aa2.56□□□□□ -2
SIR4YDR227W TFC4P33339 1025 aa2.56□□□□□ -2
SIR4YDR227W MTC2P34246 357 aa2.56□□□□□ -2
SIR4YDR227W ATG1P53104 897 aa2.56□□□□□ -2
SIR4YDR227W SRP1Q02821 542 aaKnown RBP2.56□□□□□ -2
SIR4YDR227W ESC2Q06340 456 aa2.56□□□□□ -2
SIR4YDR227W RIX7Q07844 837 aaKnown RBP2.56□□□□□ -2
SIR4YDR227W MSC6Q08818 692 aaKnown RBP2.56□□□□□ -2
SIR4YDR227W CSR2Q12734 1121 aa2.56□□□□□ -2
SIR4YDR227W UTP10P42945 1769 aaKnown RBP2.56□□□□□ -2
SIR4YDR227W DED1P06634 604 aaKnown RBP2.56□□□□□ -2
SIR4YDR227W PES4P39684 611 aa2.56□□□□□ -2
SIR4YDR227W RSM26P47141 266 aa2.56□□□□□ -2
SIR4YDR227W RPP1BP10622 106 aaKnown RBP2.55□□□□□ -2
SIR4YDR227W NAM7P30771 971 aaKnown RBP2.55□□□□□ -2
SIR4YDR227W TOA1P32773 286 aa2.55□□□□□ -2
SIR4YDR227W MIA40P36046 403 aa2.55□□□□□ -2
SIR4YDR227W ISW1P38144 1129 aa2.55□□□□□ -2
SIR4YDR227W RSC1P53236 928 aa2.55□□□□□ -2
SIR4YDR227W GRC3Q07845 632 aa2.55□□□□□ -2
SIR4YDR227W HTA1P04911 132 aaKnown RBP2.55□□□□□ -2
SIR4YDR227W HTA2P04912 132 aa2.55□□□□□ -2
SIR4YDR227W SES1P07284 462 aaKnown RBP2.55□□□□□ -2
SIR4YDR227W ERR1P0CX10 437 aa2.55□□□□□ -2
SIR4YDR227W ERR2P0CX11 437 aa2.55□□□□□ -2
SIR4YDR227W STI1P15705 589 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
SIR4YDR227W YKU70P32807 602 aa2.55□□□□□ -2
SIR4YDR227W PCS60P38137 543 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
SIR4YDR227W MAG2Q06436 670 aaKnown RBP2.55□□□□□ -2
SIR4YDR227W SLX4Q12098 748 aa2.55□□□□□ -2
SIR4YDR227W ECM2P38241 364 aaKnown RBP2.55□□□□□ -2
SIR4YDR227W QDR1P40475 563 aa2.55□□□□□ -2
SIR4YDR227W HUL4P40985 892 aa2.55□□□□□ -2
SIR4YDR227W LYS4P49367 693 aaPredicted RBP2.55□□□□□ -2
SIR4YDR227W VPS62P53285 467 aa2.55□□□□□ -2
SIR4YDR227W CTF4Q01454 927 aa2.55□□□□□ -2
SIR4YDR227W PCL8Q08966 492 aa2.55□□□□□ -2
SIR4YDR227W MNL2Q12205 849 aa2.55□□□□□ -2
SIR4YDR227W WHI5Q12416 295 aa2.55□□□□□ -2
SIR4YDR227W AHC1Q12433 566 aa2.55□□□□□ -2
SIR4YDR227W URB1P34241 1764 aaKnown RBP2.55□□□□□ -2
SIR4YDR227W DPH2P32461 534 aa2.54□□□□□ -2
SIR4YDR227W YGR237CP50089 785 aa2.54□□□□□ -2
SIR4YDR227W YDR131CQ03899 556 aa2.54□□□□□ -2
SIR4YDR227W BDS1Q08347 646 aa2.54□□□□□ -2
SIR4YDR227W MET7Q08645 548 aa2.54□□□□□ -2
SIR4YDR227W TMA7Q3E764 64 aaKnown RBP2.54□□□□□ -2
SIR4YDR227W VAB2P40003 282 aa2.54□□□□□ -2
SIR4YDR227W GYL1Q04322 720 aa2.54□□□□□ -2
SIR4YDR227W SGD1Q06132 899 aa2.54□□□□□ -2
SIR4YDR227W SPT23P35210 1082 aa2.54□□□□□ -2
SIR4YDR227W IML2P47031 731 aa2.54□□□□□ -2
SIR4YDR227W PML39Q03760 334 aa2.54□□□□□ -2
SIR4YDR227W APC11Q12157 165 aa2.54□□□□□ -2
SIR4YDR227W YLL067CQ07888 1374 aa2.54□□□□□ -2
SIR4YDR227W VPH1P32563 840 aaKnown RBP2.53□□□□□ -2
SIR4YDR227W MEP1P40260 492 aa2.53□□□□□ -2
SIR4YDR227W STR2P47164 639 aa2.53□□□□□ -2
SIR4YDR227W SDA1P53313 767 aaKnown RBP2.53□□□□□ -2
SIR4YDR227W MCP2Q06567 569 aa2.53□□□□□ -2
SIR4YDR227W SNU66Q12420 587 aaPredicted RBP2.53□□□□□ -2
SIR4YDR227W DUR1,2P32528 1835 aaKnown RBP2.53□□□□□ -2
SIR4YDR227W PTC3P34221 468 aaKnown RBP2.53□□□□□ -2
SIR4YDR227W FUN12P39730 1002 aaKnown RBP2.53□□□□□ -2
SIR4YDR227W MIP1P15801 1254 aa2.53□□□□□ -2
SIR4YDR227W SEC27P41811 889 aaKnown RBP2.53□□□□□ -2
SIR4YDR227W NET1P47035 1189 aa2.53□□□□□ -2
SIR4YDR227W SYH1Q02875 849 aaKnown RBP2.53□□□□□ -2
SIR4YDR227W TFB2Q02939 513 aa2.53□□□□□ -2
SIR4YDR227W YHR131CP38835 850 aa2.52□□□□□ -2.01
SIR4YDR227W YPR109WQ06104 294 aa2.52□□□□□ -2.01
SIR4YDR227W OXR1Q08952 273 aa2.52□□□□□ -2.01
SIR4YDR227W FRT1Q99332 602 aa2.52□□□□□ -2.01
SIR4YDR227W APC1P53886 1748 aa2.52□□□□□ -2.01
SIR4YDR227W FOB1O13329 566 aa2.52□□□□□ -2.01
SIR4YDR227W HOM2P13663 365 aaKnown RBP2.52□□□□□ -2.01
SIR4YDR227W TRX1P22217 103 aaKnown RBP2.52□□□□□ -2.01
SIR4YDR227W MNR2P35724 969 aa2.52□□□□□ -2.01
SIR4YDR227W EAF6P47128 113 aa2.52□□□□□ -2.01
SIR4YDR227W TYW3P53177 273 aa2.52□□□□□ -2.01
SIR4YDR227W MMR1Q06324 491 aa2.52□□□□□ -2.01
SIR4YDR227W RGA2Q06407 1009 aa2.52□□□□□ -2.01
SIR4YDR227W YLR352WQ06479 807 aa2.52□□□□□ -2.01
SIR4YDR227W RRG1Q12167 365 aaPredicted RBP2.52□□□□□ -2.01
SIR4YDR227W MAK11P20484 414 aaKnown RBP2.52□□□□□ -2.01
SIR4YDR227W RXT2P38255 430 aa2.52□□□□□ -2.01
SIR4YDR227W NMD3P38861 518 aaKnown RBP2.52□□□□□ -2.01
SIR4YDR227W RTF1P53064 558 aa2.52□□□□□ -2.01
SIR4YDR227W YNR063WP53749 607 aa2.52□□□□□ -2.01
SIR4YDR227W NUT2Q06213 157 aa2.52□□□□□ -2.01
SIR4YDR227W SLM3Q12093 417 aa2.52□□□□□ -2.01
SIR4YDR227W YLR125WQ12138 136 aa2.52□□□□□ -2.01
SIR4YDR227W GLK1P17709 500 aaKnown RBP2.52□□□□□ -2.01
SIR4YDR227W VTC2P43585 828 aa2.52□□□□□ -2.01
SIR4YDR227W YDR341CQ05506 607 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms