RNA–Protein interactions for RNA: YDR176W

NGG1, Transcript of Subunit of chromatin modifying histone acetyltransferase complexes, yeast

Gene NGG1, Length 2,109 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NGG1	YDR176W	GPT2	P36148	743 aa		5.08	□□□□□ -1.6
NGG1	YDR176W	VAC8	P39968	578 aa		5.08	□□□□□ -1.6
NGG1	YDR176W	FAA4	P47912	694 aa	Known RBP	5.08	□□□□□ -1.6
NGG1	YDR176W	AVO1	Q08236	1176 aa		5.08	□□□□□ -1.6
NGG1	YDR176W	MKK2	P32491	506 aa		5.08	□□□□□ -1.6
NGG1	YDR176W	AFG2	P32794	780 aa		5.08	□□□□□ -1.6
NGG1	YDR176W	YAR028W	P39548	234 aa		5.08	□□□□□ -1.6
NGG1	YDR176W	YGR053C	P53234	283 aa		5.08	□□□□□ -1.6
NGG1	YDR176W	EEB1	Q02891	456 aa		5.08	□□□□□ -1.6
NGG1	YDR176W	RKM2	Q03942	479 aa		5.08	□□□□□ -1.6
NGG1	YDR176W	MSH4	P40965	878 aa	Predicted RBP	5.07	□□□□□ -1.6
NGG1	YDR176W	RAT1	Q02792	1006 aa	Known RBP	5.07	□□□□□ -1.6
NGG1	YDR176W	GDE1	Q02979	1223 aa		5.07	□□□□□ -1.6
NGG1	YDR176W	TMA46	Q12000	345 aa	Known RBP	5.07	□□□□□ -1.6
NGG1	YDR176W	NAM7	P30771	971 aa	Known RBP	5.06	□□□□□ -1.6
NGG1	YDR176W	RER2	P35196	286 aa		5.06	□□□□□ -1.6
NGG1	YDR176W	ENT3	P47160	408 aa		5.06	□□□□□ -1.6
NGG1	YDR176W	ATG14	P38270	344 aa		5.06	□□□□□ -1.6
NGG1	YDR176W	CWC24	P53769	259 aa		5.06	□□□□□ -1.6
NGG1	YDR176W	RAD27	P26793	382 aa		5.05	□□□□□ -1.6
NGG1	YDR176W	PGM1	P33401	570 aa	Known RBP	5.05	□□□□□ -1.6
NGG1	YDR176W	AKR1	P39010	764 aa		5.05	□□□□□ -1.6
NGG1	YDR176W	GIC2	Q06648	383 aa		5.05	□□□□□ -1.6
NGG1	YDR176W	LAP2	Q10740	671 aa		5.05	□□□□□ -1.6
NGG1	YDR176W	TRP2	P00899	507 aa	Known RBP	5.04	□□□□□ -1.6
NGG1	YDR176W	SMY2	P32909	740 aa	Known RBP	5.04	□□□□□ -1.6
NGG1	YDR176W	ALG3	P38179	458 aa		5.04	□□□□□ -1.6
NGG1	YDR176W	YPL034W	Q03083	165 aa		5.04	□□□□□ -1.6
NGG1	YDR176W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected
NGG1	YDR176W	RET1	P22276	1149 aa	Known RBP	5.03	□□□□□ -1.6
NGG1	YDR176W	SYP1	P25623	870 aa	Known RBP	5.03	□□□□□ -1.6
NGG1	YDR176W	NNK1	P36003	928 aa		5.03	□□□□□ -1.6
NGG1	YDR176W	CCT8	P47079	568 aa	Known RBP	5.03	□□□□□ -1.6
NGG1	YDR176W	ALT1	P52893	592 aa		5.03	□□□□□ -1.6
NGG1	YDR176W	TYW3	P53177	273 aa		5.03	□□□□□ -1.6
NGG1	YDR176W	RSA3	Q05942	220 aa	Known RBP	5.03	□□□□□ -1.6
NGG1	YDR176W	EAR1	Q03212	550 aa		5.03	□□□□□ -1.6
NGG1	YDR176W	TIF35	Q04067	274 aa	Known RBP	5.03	□□□□□ -1.6
NGG1	YDR176W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
NGG1	YDR176W	PTC5	Q12511	572 aa		5.03	□□□□□ -1.6
NGG1	YDR176W	RPS4A	P0CX35	261 aa	Known RBP	5.02	□□□□□ -1.61
NGG1	YDR176W	RPS4B	P0CX36	261 aa	Known RBP	5.02	□□□□□ -1.61
NGG1	YDR176W	NFS1	P25374	497 aa		5.02	□□□□□ -1.61
NGG1	YDR176W	SAF1	P38352	637 aa		5.02	□□□□□ -1.61
NGG1	YDR176W	QNS1	P38795	714 aa	Known RBP	5.02	□□□□□ -1.61
NGG1	YDR176W	NMD3	P38861	518 aa	Known RBP	5.02	□□□□□ -1.61
NGG1	YDR176W	HSE1	P38753	452 aa		5.02	□□□□□ -1.61
NGG1	YDR176W	CNN1	P43618	361 aa		5.02	□□□□□ -1.61
NGG1	YDR176W	VPS53	P47061	822 aa		5.02	□□□□□ -1.61
NGG1	YDR176W	YLR257W	Q06146	321 aa	Known RBP	5.02	□□□□□ -1.61
NGG1	YDR176W	SSF2	Q12153	453 aa	Predicted RBP	5.02	□□□□□ -1.61
NGG1	YDR176W	DBP5	P20449	482 aa	Known RBP	5.01	□□□□□ -1.61
NGG1	YDR176W	PRI2	P20457	528 aa		5.01	□□□□□ -1.61
NGG1	YDR176W	LYP1	P32487	611 aa		5.01	□□□□□ -1.61
NGG1	YDR176W	YKL069W	P36088	180 aa		5.01	□□□□□ -1.61
NGG1	YDR176W	ESC2	Q06340	456 aa		5.01	□□□□□ -1.61
NGG1	YDR176W	AOS1	Q06624	347 aa		5.01	□□□□□ -1.61
NGG1	YDR176W	OPI10	Q08202	246 aa		5.01	□□□□□ -1.61
NGG1	YDR176W	SEA4	P38164	1038 aa		5	□□□□□ -1.61
NGG1	YDR176W	MPH1	P40562	993 aa		5	□□□□□ -1.61
NGG1	YDR176W	FAL1	Q12099	399 aa	Known RBP	5	□□□□□ -1.61
NGG1	YDR176W	YLR122C	Q12312	125 aa		5	□□□□□ -1.61
NGG1	YDR176W	MOT2	P34909	587 aa	Known RBP	4.99	□□□□□ -1.61
NGG1	YDR176W	MMM1	P41800	426 aa		4.99	□□□□□ -1.61
NGG1	YDR176W	YLR225C	Q05948	407 aa	Known RBP	4.99	□□□□□ -1.61
NGG1	YDR176W	PUS7	Q08647	676 aa	Known RBP	4.99	□□□□□ -1.61
NGG1	YDR176W	CHS2	P14180	963 aa		4.99	□□□□□ -1.61
NGG1	YDR176W	BAS1	P22035	811 aa		4.99	□□□□□ -1.61
NGG1	YDR176W	KIP1	P28742	1111 aa		4.99	□□□□□ -1.61
NGG1	YDR176W	MLS1	P30952	554 aa		4.99	□□□□□ -1.61
NGG1	YDR176W	COQ2	P32378	372 aa		4.99	□□□□□ -1.61
NGG1	YDR176W	WHI3	P34761	661 aa	Known RBP	4.99	□□□□□ -1.61
NGG1	YDR176W	LSB3	P43603	459 aa	Known RBP	4.99	□□□□□ -1.61
NGG1	YDR176W	YJL045W	P47052	634 aa		4.99	□□□□□ -1.61
NGG1	YDR176W	TPP1	Q03796	238 aa		4.99	□□□□□ -1.61
NGG1	YDR176W	YPL066W	Q12194	479 aa		4.99	□□□□□ -1.61
NGG1	YDR176W	INO1	P11986	533 aa		4.98	□□□□□ -1.61
NGG1	YDR176W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
NGG1	YDR176W	ABD1	P32783	436 aa	Predicted RBP	4.98	□□□□□ -1.61
NGG1	YDR176W	RGD1	P38339	666 aa		4.98	□□□□□ -1.61
NGG1	YDR176W	WRS1	Q12109	432 aa	Known RBP	4.98	□□□□□ -1.61
NGG1	YDR176W	MCM7	P38132	845 aa		4.97	□□□□□ -1.61
NGG1	YDR176W	GPB2	P39717	880 aa		4.97	□□□□□ -1.61
NGG1	YDR176W	SPO20	Q04359	397 aa		4.97	□□□□□ -1.61
NGG1	YDR176W	YVC1	Q12324	675 aa		4.97	□□□□□ -1.61
NGG1	YDR176W	TAT2	P38967	592 aa		4.97	□□□□□ -1.61
NGG1	YDR176W	CIT3	P43635	486 aa		4.97	□□□□□ -1.61
NGG1	YDR176W	MTC5	Q03897	1148 aa		4.97	□□□□□ -1.61
NGG1	YDR176W	HRK1	Q08732	759 aa	Known RBP	4.97	□□□□□ -1.61
NGG1	YDR176W	KAE1	P36132	386 aa		4.96	□□□□□ -1.62
NGG1	YDR176W	YPL260W	Q08977	551 aa		4.96	□□□□□ -1.62
NGG1	YDR176W	SPO21	Q12411	609 aa		4.96	□□□□□ -1.62
NGG1	YDR176W	YER152C	P10356	443 aa		4.96	□□□□□ -1.62
NGG1	YDR176W	GRX1	P25373	110 aa	Known RBP	4.96	□□□□□ -1.62
NGG1	YDR176W	AGP1	P25376	633 aa		4.96	□□□□□ -1.62
NGG1	YDR176W	SPF1	P39986	1215 aa	Known RBP	4.96	□□□□□ -1.62
NGG1	YDR176W	HNT2	P49775	206 aa		4.96	□□□□□ -1.62
NGG1	YDR176W	YGR130C	P53278	816 aa		4.96	□□□□□ -1.62
NGG1	YDR176W	MSB1	P21339	1137 aa	Known RBP	4.95	□□□□□ -1.62
NGG1	YDR176W	OCA5	P38738	679 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms