RNA–Protein interactions for RNA: YDR097C

MSH6, Transcript of Protein required for mismatch repair in mitosis and meiosis, yeastyeast

Gene MSH6, Length 3,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH6YDR097C PRP40P33203 583 aaKnown RBP2.26□□□□□ -2.05
MSH6YDR097C RIM11P38615 370 aa2.26□□□□□ -2.05
MSH6YDR097C HXT8P40886 569 aa2.26□□□□□ -2.05
MSH6YDR097C YNL011CP53980 444 aa2.26□□□□□ -2.05
MSH6YDR097C GAL11P19659 1081 aa2.26□□□□□ -2.05
MSH6YDR097C SLA1P32790 1244 aa2.26□□□□□ -2.05
MSH6YDR097C AMN1P38285 549 aaPredicted RBP2.26□□□□□ -2.05
MSH6YDR097C BSD2P38356 321 aa2.26□□□□□ -2.05
MSH6YDR097C SSN3P39073 555 aa2.26□□□□□ -2.05
MSH6YDR097C NTA1P40354 457 aa2.26□□□□□ -2.05
MSH6YDR097C SRF1Q12516 437 aa2.26□□□□□ -2.05
MSH6YDR097C HEM13P11353 328 aaKnown RBP2.26□□□□□ -2.05
MSH6YDR097C FBP26P32604 452 aa2.26□□□□□ -2.05
MSH6YDR097C DLD1P32891 587 aa2.26□□□□□ -2.05
MSH6YDR097C RSP5P39940 809 aaKnown RBP2.26□□□□□ -2.05
MSH6YDR097C HUL4P40985 892 aa2.26□□□□□ -2.05
MSH6YDR097C YGL081WP53156 320 aa2.26□□□□□ -2.05
MSH6YDR097C YMR074CQ04773 145 aa2.26□□□□□ -2.05
MSH6YDR097C YLR125WQ12138 136 aa2.26□□□□□ -2.05
MSH6YDR097C TOM70P07213 617 aaKnown RBP2.25□□□□□ -2.05
MSH6YDR097C MRPL33P20084 86 aa2.25□□□□□ -2.05
MSH6YDR097C VMA3P25515 160 aa2.25□□□□□ -2.05
MSH6YDR097C SCD5P34758 872 aa2.25□□□□□ -2.05
MSH6YDR097C CCC2P38995 1004 aa2.25□□□□□ -2.05
MSH6YDR097C TFB2Q02939 513 aa2.25□□□□□ -2.05
MSH6YDR097C SPO75Q07798 868 aa2.25□□□□□ -2.05
MSH6YDR097C FAP7Q12055 197 aaPredicted RBP2.25□□□□□ -2.05
MSH6YDR097C MPD2Q99316 277 aa2.25□□□□□ -2.05
MSH6YDR097C GCR1P07261 785 aa2.25□□□□□ -2.05
MSH6YDR097C MLF3P32047 452 aa2.25□□□□□ -2.05
MSH6YDR097C SEC6P32844 805 aa2.25□□□□□ -2.05
MSH6YDR097C MSN5P52918 1224 aa2.25□□□□□ -2.05
MSH6YDR097C SRC1Q03707 834 aa2.25□□□□□ -2.05
MSH6YDR097C SND1Q04007 877 aa2.25□□□□□ -2.05
MSH6YDR097C SMC4Q12267 1418 aa2.25□□□□□ -2.05
MSH6YDR097C RAS1P01119 309 aa2.25□□□□□ -2.05
MSH6YDR097C TRX2P22803 104 aaKnown RBP2.25□□□□□ -2.05
MSH6YDR097C DAL1P32375 460 aa2.25□□□□□ -2.05
MSH6YDR097C SPT23P35210 1082 aa2.25□□□□□ -2.05
MSH6YDR097C HSV2P50079 448 aaPredicted RBP2.25□□□□□ -2.05
MSH6YDR097C YPL109CQ02981 657 aa2.25□□□□□ -2.05
MSH6YDR097C SPO20Q04359 397 aa2.25□□□□□ -2.05
MSH6YDR097C GBP2P25555 427 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
MSH6YDR097C SMC1P32908 1225 aa2.24□□□□□ -2.05
MSH6YDR097C TPM2P40414 161 aa2.24□□□□□ -2.05
MSH6YDR097C MAL11P53048 616 aa2.24□□□□□ -2.05
MSH6YDR097C TMA17Q12513 150 aa2.24□□□□□ -2.05
MSH6YDR097C HSP60P19882 572 aaKnown RBP2.24□□□□□ -2.05
MSH6YDR097C PPH3P32345 308 aa2.24□□□□□ -2.05
MSH6YDR097C GRX4P32642 244 aa2.24□□□□□ -2.05
MSH6YDR097C MBP1P39678 833 aa2.24□□□□□ -2.05
MSH6YDR097C YER156CP40093 338 aaKnown RBP2.24□□□□□ -2.05
MSH6YDR097C PTK2P47116 818 aaKnown RBP2.24□□□□□ -2.05
MSH6YDR097C SYH1Q02875 849 aaKnown RBP2.24□□□□□ -2.05
MSH6YDR097C ENT2Q05785 613 aa2.24□□□□□ -2.05
MSH6YDR097C YDL124WQ07551 312 aaKnown RBP2.24□□□□□ -2.05
MSH6YDR097C CDC34P14682 295 aa2.24□□□□□ -2.05
MSH6YDR097C ERP2P39704 215 aa2.24□□□□□ -2.05
MSH6YDR097C SAH1P39954 449 aaKnown RBP2.24□□□□□ -2.05
MSH6YDR097C YGR237CP50089 785 aa2.24□□□□□ -2.05
MSH6YDR097C ZDS1P50111 915 aaKnown RBP2.24□□□□□ -2.05
MSH6YDR097C SDA1P53313 767 aaKnown RBP2.24□□□□□ -2.05
MSH6YDR097C PDR5P33302 1511 aaKnown RBP2.23□□□□□ -2.05
MSH6YDR097C SEC23P15303 768 aaKnown RBP2.23□□□□□ -2.05
MSH6YDR097C MSN1P22148 382 aa2.23□□□□□ -2.05
MSH6YDR097C IRE1P32361 1115 aa2.23□□□□□ -2.05
MSH6YDR097C DUR3P33413 735 aa2.23□□□□□ -2.05
MSH6YDR097C SUM1P46676 1062 aa2.23□□□□□ -2.05
MSH6YDR097C CLA4P48562 842 aa2.23□□□□□ -2.05
MSH6YDR097C YNL165WP53891 406 aa2.23□□□□□ -2.05
MSH6YDR097C ULP1Q02724 621 aa2.23□□□□□ -2.05
MSH6YDR097C BUL2Q03758 920 aaKnown RBP2.23□□□□□ -2.05
MSH6YDR097C YCS4Q06156 1176 aa2.23□□□□□ -2.05
MSH6YDR097C YPR071WQ12346 211 aa2.23□□□□□ -2.05
MSH6YDR097C TIF6Q12522 245 aaKnown RBP2.23□□□□□ -2.05
MSH6YDR097C CIT1P00890 479 aa2.23□□□□□ -2.05
MSH6YDR097C FLP1P03870 423 aa2.23□□□□□ -2.05
MSH6YDR097C LEU1P07264 779 aaKnown RBP2.23□□□□□ -2.05
MSH6YDR097C RAD18P10862 487 aa2.23□□□□□ -2.05
MSH6YDR097C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
MSH6YDR097C SWE1P32944 819 aa2.23□□□□□ -2.05
MSH6YDR097C PAN5P38787 379 aa2.23□□□□□ -2.05
MSH6YDR097C XDJ1P39102 459 aa2.23□□□□□ -2.05
MSH6YDR097C PIC2P40035 300 aa2.23□□□□□ -2.05
MSH6YDR097C MTC5Q03897 1148 aa2.23□□□□□ -2.05
MSH6YDR097C SHE9Q04172 456 aa2.23□□□□□ -2.05
MSH6YDR097C YDR306CQ06640 478 aa2.23□□□□□ -2.05
MSH6YDR097C NTG2Q08214 380 aa2.23□□□□□ -2.05
MSH6YDR097C PHR1P05066 565 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
MSH6YDR097C PUF4P25339 888 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
MSH6YDR097C TFC4P33339 1025 aa2.22□□□□□ -2.05
MSH6YDR097C AIM46P38885 310 aa2.22□□□□□ -2.05
MSH6YDR097C PSY2P40164 858 aa2.22□□□□□ -2.05
MSH6YDR097C PFD1P46988 109 aa2.22□□□□□ -2.05
MSH6YDR097C REC8Q12188 680 aa2.22□□□□□ -2.05
MSH6YDR097C INO1P11986 533 aa2.22□□□□□ -2.05
MSH6YDR097C UGA3P26370 528 aa2.22□□□□□ -2.05
MSH6YDR097C GEM1P39722 662 aa2.22□□□□□ -2.05
MSH6YDR097C SPF1P39986 1215 aaKnown RBP2.22□□□□□ -2.05
MSH6YDR097C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms