RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W OSW7P43611 510 aa2.44□□□□□ -2.02
MSH5YDL154W BIO5P53744 561 aaKnown RBP2.44□□□□□ -2.02
MSH5YDL154W FAR11P53917 953 aa2.44□□□□□ -2.02
MSH5YDL154W SPO71Q03868 1245 aa2.44□□□□□ -2.02
MSH5YDL154W YLL054CQ12244 843 aa2.44□□□□□ -2.02
MSH5YDL154W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
MSH5YDL154W TAF13P11747 167 aa2.44□□□□□ -2.02
MSH5YDL154W OCA5P38738 679 aa2.44□□□□□ -2.02
MSH5YDL154W TED1P40533 473 aa2.44□□□□□ -2.02
MSH5YDL154W SAP155P43612 1002 aa2.44□□□□□ -2.02
MSH5YDL154W TIM54P47045 478 aa2.44□□□□□ -2.02
MSH5YDL154W YGL140CP53120 1219 aa2.44□□□□□ -2.02
MSH5YDL154W YGR035CP53222 116 aa2.44□□□□□ -2.02
MSH5YDL154W NAN1Q02931 896 aaKnown RBP2.44□□□□□ -2.02
MSH5YDL154W EST2Q06163 884 aa2.44□□□□□ -2.02
MSH5YDL154W MRP10O75012 95 aa2.43□□□□□ -2.02
MSH5YDL154W TFA2P36145 328 aa2.43□□□□□ -2.02
MSH5YDL154W MCM7P38132 845 aa2.43□□□□□ -2.02
MSH5YDL154W HSE1P38753 452 aa2.43□□□□□ -2.02
MSH5YDL154W PAN5P38787 379 aa2.43□□□□□ -2.02
MSH5YDL154W HAS1Q03532 505 aaKnown RBP2.43□□□□□ -2.02
MSH5YDL154W MTC5Q03897 1148 aa2.43□□□□□ -2.02
MSH5YDL154W OPI10Q08202 246 aa2.43□□□□□ -2.02
MSH5YDL154W TOP2P06786 1428 aaKnown RBP2.43□□□□□ -2.02
MSH5YDL154W CCP1P00431 361 aa2.43□□□□□ -2.02
MSH5YDL154W GPM1P00950 247 aaKnown RBP2.43□□□□□ -2.02
MSH5YDL154W HTS1P07263 546 aaKnown RBP2.43□□□□□ -2.02
MSH5YDL154W STI1P15705 589 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
MSH5YDL154W PDC5P16467 563 aaKnown RBP2.43□□□□□ -2.02
MSH5YDL154W LYP1P32487 611 aa2.43□□□□□ -2.02
MSH5YDL154W REI1P38344 393 aaPredicted RBP2.43□□□□□ -2.02
MSH5YDL154W SNF7P39929 240 aaKnown RBP2.43□□□□□ -2.02
MSH5YDL154W YNR065CP53751 1116 aa2.43□□□□□ -2.02
MSH5YDL154W SSF2Q12153 453 aaPredicted RBP2.43□□□□□ -2.02
MSH5YDL154W SMC4Q12267 1418 aa2.42□□□□□ -2.02
MSH5YDL154W RAD4P14736 754 aa2.42□□□□□ -2.02
MSH5YDL154W SEC23P15303 768 aaKnown RBP2.42□□□□□ -2.02
MSH5YDL154W KNS1P32350 737 aaPredicted RBP2.42□□□□□ -2.02
MSH5YDL154W YNR014WP53719 212 aa2.42□□□□□ -2.02
MSH5YDL154W ROD1Q02805 837 aa2.42□□□□□ -2.02
MSH5YDL154W LAP2Q10740 671 aa2.42□□□□□ -2.02
MSH5YDL154W OSH2Q12451 1283 aa2.42□□□□□ -2.02
MSH5YDL154W NHA1Q99271 985 aa2.42□□□□□ -2.02
MSH5YDL154W MMS22Q06164 1454 aa2.42□□□□□ -2.02
MSH5YDL154W RPO21P04050 1733 aaKnown RBP2.42□□□□□ -2.02
MSH5YDL154W PRP5P21372 849 aaPredicted RBP2.42□□□□□ -2.02
MSH5YDL154W VMA4P22203 233 aaKnown RBP2.42□□□□□ -2.02
MSH5YDL154W GRX1P25373 110 aaKnown RBP2.42□□□□□ -2.02
MSH5YDL154W MOT2P34909 587 aaKnown RBP2.42□□□□□ -2.02
MSH5YDL154W MAE1P36013 669 aaKnown RBP2.42□□□□□ -2.02
MSH5YDL154W PGM2P37012 569 aaKnown RBP2.42□□□□□ -2.02
MSH5YDL154W SIW14P53965 281 aa2.42□□□□□ -2.02
MSH5YDL154W NOG1Q02892 647 aaKnown RBP2.42□□□□□ -2.02
MSH5YDL154W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
MSH5YDL154W HDA2Q06629 674 aa2.42□□□□□ -2.02
MSH5YDL154W ELG1Q12050 791 aa2.42□□□□□ -2.02
MSH5YDL154W ADD66P36040 267 aa2.41□□□□□ -2.02
MSH5YDL154W EXO5P38289 585 aa2.41□□□□□ -2.02
MSH5YDL154W SLS1P42900 643 aa2.41□□□□□ -2.02
MSH5YDL154W GIS4Q04233 774 aa2.41□□□□□ -2.02
MSH5YDL154W SPO75Q07798 868 aa2.41□□□□□ -2.02
MSH5YDL154W SLP1Q12232 587 aa2.41□□□□□ -2.02
MSH5YDL154W STU1P38198 1513 aa2.41□□□□□ -2.02
MSH5YDL154W TRP2P00899 507 aaKnown RBP2.41□□□□□ -2.02
MSH5YDL154W INO1P11986 533 aa2.41□□□□□ -2.02
MSH5YDL154W NAR1P23503 491 aaKnown RBP2.41□□□□□ -2.02
MSH5YDL154W NFS1P25374 497 aa2.41□□□□□ -2.02
MSH5YDL154W BRN1P38170 754 aa2.41□□□□□ -2.02
MSH5YDL154W YAR028WP39548 234 aa2.41□□□□□ -2.02
MSH5YDL154W BOI2P39969 1040 aa2.41□□□□□ -2.02
MSH5YDL154W TYW3P53177 273 aa2.41□□□□□ -2.02
MSH5YDL154W MEC3Q02574 474 aa2.41□□□□□ -2.02
MSH5YDL154W NSE3Q05541 303 aa2.41□□□□□ -2.02
MSH5YDL154W ALG6Q12001 544 aaKnown RBP2.41□□□□□ -2.02
MSH5YDL154W DPH6Q12429 685 aa2.41□□□□□ -2.02
MSH5YDL154W GCN2P15442 1659 aa2.41□□□□□ -2.02
MSH5YDL154W TY1A-LR4P0C2I8 440 aaKnown RBP2.4□□□□□ -2.02
MSH5YDL154W TY1A-DR6P0CX70 440 aa2.4□□□□□ -2.02
MSH5YDL154W TY1A-ER1P0CX71 440 aa2.4□□□□□ -2.02
MSH5YDL154W TY1A-LR2P0CX72 440 aa2.4□□□□□ -2.02
MSH5YDL154W TY1A-PLP0CX73 440 aa2.4□□□□□ -2.02
MSH5YDL154W TY1A-JR1P0CX74 440 aa2.4□□□□□ -2.02
MSH5YDL154W TY1A-LR3P0CX75 440 aa2.4□□□□□ -2.02
MSH5YDL154W TY1A-ML2P0CX76 440 aa2.4□□□□□ -2.02
MSH5YDL154W SYP1P25623 870 aaKnown RBP2.4□□□□□ -2.02
MSH5YDL154W ABD1P32783 436 aaPredicted RBP2.4□□□□□ -2.02
MSH5YDL154W ARL1P38116 183 aaKnown RBP2.4□□□□□ -2.02
MSH5YDL154W AMN1P38285 549 aaPredicted RBP2.4□□□□□ -2.02
MSH5YDL154W NEM1P38757 446 aa2.4□□□□□ -2.02
MSH5YDL154W ENT3P47160 408 aa2.4□□□□□ -2.02
MSH5YDL154W GCV1P48015 400 aa2.4□□□□□ -2.02
MSH5YDL154W UTP5Q04177 643 aaKnown RBP2.4□□□□□ -2.02
MSH5YDL154W YLR225CQ05948 407 aaKnown RBP2.4□□□□□ -2.02
MSH5YDL154W YIG1Q08956 461 aa2.4□□□□□ -2.02
MSH5YDL154W TY1A-GR1Q12085 440 aa2.4□□□□□ -2.02
MSH5YDL154W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.4□□□□□ -2.02
MSH5YDL154W TY1A-OLQ92392 440 aaKnown RBP2.4□□□□□ -2.02
MSH5YDL154W AI1P03875 834 aa2.4□□□□□ -2.03
MSH5YDL154W YKL107WP34251 309 aa2.4□□□□□ -2.03
MSH5YDL154W MRP8P35719 219 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms