RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	YHR020W	P38708	688 aa	Known RBP	7.33	□□□□□ -1.24
RPN5	YDL147W	MNN1	P39106	762 aa		7.33	□□□□□ -1.24
RPN5	YDL147W	ERP6	P53198	216 aa		7.33	□□□□□ -1.24
RPN5	YDL147W	EAF1	Q06337	982 aa		7.33	□□□□□ -1.24
RPN5	YDL147W	CIT1	P00890	479 aa		7.32	□□□□□ -1.24
RPN5	YDL147W	SYP1	P25623	870 aa	Known RBP	7.32	□□□□□ -1.24
RPN5	YDL147W	ARE1	P25628	610 aa		7.32	□□□□□ -1.24
RPN5	YDL147W	MKK2	P32491	506 aa		7.32	□□□□□ -1.24
RPN5	YDL147W	TIM23	P32897	222 aa		7.32	□□□□□ -1.24
RPN5	YDL147W	STE5	P32917	917 aa		7.32	□□□□□ -1.24
RPN5	YDL147W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	7.32	□□□□□ -1.24	not detected
RPN5	YDL147W	ARL1	P38116	183 aa	Known RBP	7.32	□□□□□ -1.24
RPN5	YDL147W	HUL4	P40985	892 aa		7.32	□□□□□ -1.24
RPN5	YDL147W	HAS1	Q03532	505 aa	Known RBP	7.32	□□□□□ -1.24
RPN5	YDL147W	UTP5	Q04177	643 aa	Known RBP	7.32	□□□□□ -1.24
RPN5	YDL147W	FMP25	Q08023	583 aa		7.32	□□□□□ -1.24
RPN5	YDL147W	PPM2	Q08282	695 aa		7.32	□□□□□ -1.24
RPN5	YDL147W	YIG1	Q08956	461 aa		7.32	□□□□□ -1.24
RPN5	YDL147W	YGR161W-C	Q3E744	92 aa		7.32	□□□□□ -1.24
RPN5	YDL147W	SBP1	P10080	294 aa	Known RBP	7.31	□□□□□ -1.24
RPN5	YDL147W	THI4	P32318	326 aa		7.31	□□□□□ -1.24
RPN5	YDL147W	SEA4	P38164	1038 aa		7.31	□□□□□ -1.24
RPN5	YDL147W	SLS1	P42900	643 aa		7.31	□□□□□ -1.24
RPN5	YDL147W	SOK2	P53438	785 aa	Predicted RBP	7.31	□□□□□ -1.24
RPN5	YDL147W	SPO71	Q03868	1245 aa		7.31	□□□□□ -1.24
RPN5	YDL147W	RKM4	Q12504	494 aa		7.31	□□□□□ -1.24
RPN5	YDL147W	TY1A-LR4	P0C2I8	440 aa	Known RBP	7.3	□□□□□ -1.24
RPN5	YDL147W	TY1A-DR6	P0CX70	440 aa		7.3	□□□□□ -1.24
RPN5	YDL147W	TY1A-ER1	P0CX71	440 aa		7.3	□□□□□ -1.24
RPN5	YDL147W	TY1A-LR2	P0CX72	440 aa		7.3	□□□□□ -1.24
RPN5	YDL147W	TY1A-PL	P0CX73	440 aa		7.3	□□□□□ -1.24
RPN5	YDL147W	TY1A-JR1	P0CX74	440 aa		7.3	□□□□□ -1.24
RPN5	YDL147W	TY1A-LR3	P0CX75	440 aa		7.3	□□□□□ -1.24
RPN5	YDL147W	TY1A-ML2	P0CX76	440 aa		7.3	□□□□□ -1.24
RPN5	YDL147W	MOT2	P34909	587 aa	Known RBP	7.3	□□□□□ -1.24
RPN5	YDL147W	NEM1	P38757	446 aa		7.3	□□□□□ -1.24
RPN5	YDL147W	TIF35	Q04067	274 aa	Known RBP	7.3	□□□□□ -1.24
RPN5	YDL147W	ESC2	Q06340	456 aa		7.3	□□□□□ -1.24
RPN5	YDL147W	TY1A-GR1	Q12085	440 aa		7.3	□□□□□ -1.24
RPN5	YDL147W	YLL054C	Q12244	843 aa		7.3	□□□□□ -1.24
RPN5	YDL147W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	7.3	□□□□□ -1.24
RPN5	YDL147W	TY1A-OL	Q92392	440 aa	Known RBP	7.3	□□□□□ -1.24
RPN5	YDL147W	SCT1	P32784	759 aa		7.29	□□□□□ -1.24
RPN5	YDL147W	YKL107W	P34251	309 aa		7.29	□□□□□ -1.24
RPN5	YDL147W	LYS5	P50113	272 aa		7.29	□□□□□ -1.24
RPN5	YDL147W	MEC3	Q02574	474 aa		7.29	□□□□□ -1.24
RPN5	YDL147W	RKM2	Q03942	479 aa		7.29	□□□□□ -1.24
RPN5	YDL147W	SYT1	Q06836	1226 aa		7.29	□□□□□ -1.24
RPN5	YDL147W	LAP2	Q10740	671 aa		7.29	□□□□□ -1.24
RPN5	YDL147W	PRP9	P19736	530 aa	Known RBP	7.28	□□□□□ -1.24
RPN5	YDL147W	DBP5	P20449	482 aa	Known RBP	7.28	□□□□□ -1.24
RPN5	YDL147W	MCM7	P38132	845 aa		7.28	□□□□□ -1.24
RPN5	YDL147W	GIP2	P40036	548 aa		7.28	□□□□□ -1.24
RPN5	YDL147W	CNN1	P43618	361 aa		7.28	□□□□□ -1.24
RPN5	YDL147W	GCV1	P48015	400 aa		7.28	□□□□□ -1.24
RPN5	YDL147W	UTP8	P53276	713 aa	Known RBP	7.28	□□□□□ -1.24
RPN5	YDL147W	YNR063W	P53749	607 aa		7.28	□□□□□ -1.24
RPN5	YDL147W	CAN1	P04817	590 aa		7.27	□□□□□ -1.24
RPN5	YDL147W	TSR4	P25040	408 aa		7.27	□□□□□ -1.24
RPN5	YDL147W	REI1	P38344	393 aa	Predicted RBP	7.27	□□□□□ -1.24
RPN5	YDL147W	MSH4	P40965	878 aa	Predicted RBP	7.27	□□□□□ -1.24
RPN5	YDL147W	YGL176C	P46945	554 aa		7.27	□□□□□ -1.24
RPN5	YDL147W	YGL081W	P53156	320 aa		7.27	□□□□□ -1.24
RPN5	YDL147W	CAF120	P53836	1060 aa		7.27	□□□□□ -1.24
RPN5	YDL147W	RAT1	Q02792	1006 aa	Known RBP	7.27	□□□□□ -1.24
RPN5	YDL147W	ALR2	P43553	858 aa		7.27	□□□□□ -1.25
RPN5	YDL147W	YDL124W	Q07551	312 aa	Known RBP	7.27	□□□□□ -1.25
RPN5	YDL147W	AVO1	Q08236	1176 aa		7.27	□□□□□ -1.25
RPN5	YDL147W	SLP1	Q12232	587 aa		7.27	□□□□□ -1.25
RPN5	YDL147W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	7.26	□□□□□ -1.25	not detected
RPN5	YDL147W	ACO2	P39533	789 aa		7.26	□□□□□ -1.25
RPN5	YDL147W	HNT2	P49775	206 aa		7.26	□□□□□ -1.25
RPN5	YDL147W	YMR074C	Q04773	145 aa		7.26	□□□□□ -1.25
RPN5	YDL147W	ERR1	P0CX10	437 aa		7.25	□□□□□ -1.25
RPN5	YDL147W	ERR2	P0CX11	437 aa		7.25	□□□□□ -1.25
RPN5	YDL147W	SAC7	P17121	654 aa		7.25	□□□□□ -1.25
RPN5	YDL147W	HSE1	P38753	452 aa		7.25	□□□□□ -1.25
RPN5	YDL147W	PAN5	P38787	379 aa		7.25	□□□□□ -1.25
RPN5	YDL147W	PFD1	P46988	109 aa		7.25	□□□□□ -1.25
RPN5	YDL147W	AOS1	Q06624	347 aa		7.25	□□□□□ -1.25
RPN5	YDL147W	PTC5	Q12511	572 aa		7.25	□□□□□ -1.25
RPN5	YDL147W	YAR028W	P39548	234 aa		7.24	□□□□□ -1.25
RPN5	YDL147W	YIR007W	P40566	764 aa		7.24	□□□□□ -1.25
RPN5	YDL147W	TPO2	P53283	614 aa		7.24	□□□□□ -1.25
RPN5	YDL147W	UBX5	Q06682	500 aa		7.24	□□□□□ -1.25
RPN5	YDL147W	KNS1	P32350	737 aa	Predicted RBP	7.23	□□□□□ -1.25
RPN5	YDL147W	CDC11	P32458	415 aa		7.23	□□□□□ -1.25
RPN5	YDL147W	ALG3	P38179	458 aa		7.23	□□□□□ -1.25
RPN5	YDL147W	RGD1	P38339	666 aa		7.23	□□□□□ -1.25
RPN5	YDL147W	MBP1	P39678	833 aa		7.23	□□□□□ -1.25
RPN5	YDL147W	SPO74	P45819	413 aa		7.23	□□□□□ -1.25
RPN5	YDL147W	YJR142W	P47173	342 aa		7.23	□□□□□ -1.25
RPN5	YDL147W	MTC5	Q03897	1148 aa		7.23	□□□□□ -1.25
RPN5	YDL147W	PDC5	P16467	563 aa	Known RBP	7.22	□□□□□ -1.25
RPN5	YDL147W	MLS1	P30952	554 aa		7.22	□□□□□ -1.25
RPN5	YDL147W	POL5	P39985	1022 aa	Known RBP	7.22	□□□□□ -1.25
RPN5	YDL147W	TED1	P40533	473 aa		7.22	□□□□□ -1.25
RPN5	YDL147W	VPS53	P47061	822 aa		7.22	□□□□□ -1.25
RPN5	YDL147W	TAF8	Q03750	510 aa		7.22	□□□□□ -1.25
RPN5	YDL147W	ALG14	P38242	237 aa		7.21	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 94.9 ms