RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W OMS1Q06668 471 aa7.74□□□□□ -1.17
NUP84YDL116W THI3Q07471 609 aa7.74□□□□□ -1.17
NUP84YDL116W STI1P15705 589 aaKnown RBP RIP-Chip data7.74□□□□□ -1.17not detected
NUP84YDL116W RAD57P25301 460 aa7.74□□□□□ -1.17
NUP84YDL116W PRP40P33203 583 aaKnown RBP7.74□□□□□ -1.17
NUP84YDL116W OSH3P38713 996 aaKnown RBP7.74□□□□□ -1.17
NUP84YDL116W SIP3P38717 1229 aa7.74□□□□□ -1.17
NUP84YDL116W SHQ1P40486 507 aaPredicted RBP7.74□□□□□ -1.17
NUP84YDL116W PCI8P40512 444 aa7.74□□□□□ -1.17
NUP84YDL116W HUL4P40985 892 aa7.74□□□□□ -1.17
NUP84YDL116W IRC8P47046 822 aa7.74□□□□□ -1.17
NUP84YDL116W MTC5Q03897 1148 aa7.74□□□□□ -1.17
NUP84YDL116W TOM70P07213 617 aaKnown RBP7.73□□□□□ -1.17
NUP84YDL116W DPB3P27344 201 aa7.73□□□□□ -1.17
NUP84YDL116W PXL1P36166 706 aa7.73□□□□□ -1.17
NUP84YDL116W MIP6P38760 659 aaKnown RBP7.73□□□□□ -1.17
NUP84YDL116W IES1P43579 692 aa7.73□□□□□ -1.17
NUP84YDL116W YLR287CQ05881 355 aa7.73□□□□□ -1.17
NUP84YDL116W MMR1Q06324 491 aa7.73□□□□□ -1.17
NUP84YDL116W VAC14Q06708 880 aa7.73□□□□□ -1.17
NUP84YDL116W RIM15P43565 1770 aa7.73□□□□□ -1.17
NUP84YDL116W CAF20P12962 161 aaKnown RBP7.73□□□□□ -1.17
NUP84YDL116W PDC6P26263 563 aaKnown RBP7.73□□□□□ -1.17
NUP84YDL116W CTM1P38818 585 aa7.73□□□□□ -1.17
NUP84YDL116W ENV11P53246 860 aa7.73□□□□□ -1.17
NUP84YDL116W ERG5P54781 538 aa7.73□□□□□ -1.17
NUP84YDL116W SPP382Q06411 708 aaPredicted RBP7.73□□□□□ -1.17
NUP84YDL116W ENV9Q08651 330 aa7.73□□□□□ -1.17
NUP84YDL116W TUF1P02992 437 aaKnown RBP7.72□□□□□ -1.17
NUP84YDL116W MET6P05694 767 aaKnown RBP7.72□□□□□ -1.17
NUP84YDL116W STE11P23561 717 aa7.72□□□□□ -1.17
NUP84YDL116W CDC3P32457 520 aaKnown RBP7.72□□□□□ -1.17
NUP84YDL116W MCD4P36051 919 aa7.72□□□□□ -1.17
NUP84YDL116W CRG1P38892 291 aaRIP-Chip data7.72□□□□□ -1.17 RIP-Chip
NUP84YDL116W FYV8P46949 817 aaKnown RBP7.72□□□□□ -1.17
NUP84YDL116W HFM1P51979 1187 aa7.72□□□□□ -1.17
NUP84YDL116W SEN54Q02825 467 aaPredicted RBP7.72□□□□□ -1.17
NUP84YDL116W SSF2Q12153 453 aaPredicted RBP7.72□□□□□ -1.17
NUP84YDL116W RUD3Q12234 484 aaKnown RBP7.72□□□□□ -1.17
NUP84YDL116W SUP35P05453 685 aaKnown RBP7.71□□□□□ -1.17
NUP84YDL116W CDC60P26637 1090 aaKnown RBP7.71□□□□□ -1.17
NUP84YDL116W PRO3P32263 286 aaKnown RBP7.71□□□□□ -1.17
NUP84YDL116W SPC110P32380 944 aa7.71□□□□□ -1.17
NUP84YDL116W RPL34BP40525 121 aaKnown RBP7.71□□□□□ -1.17
NUP84YDL116W YDR338CQ05497 695 aa7.71□□□□□ -1.17
NUP84YDL116W NOB1Q08444 459 aaKnown RBP7.71□□□□□ -1.17
NUP84YDL116W HIS4P00815 799 aaKnown RBP7.71□□□□□ -1.18
NUP84YDL116W GLO3P38682 493 aaKnown RBP7.71□□□□□ -1.18
NUP84YDL116W KIC1P38692 1080 aa7.71□□□□□ -1.18
NUP84YDL116W YHL050CP38721 697 aa7.71□□□□□ -1.18
NUP84YDL116W SPL2P38839 148 aa7.71□□□□□ -1.18
NUP84YDL116W AIP1P46680 615 aaKnown RBP7.71□□□□□ -1.18
NUP84YDL116W CUE3P53137 624 aaKnown RBP7.71□□□□□ -1.18
NUP84YDL116W SOV1Q04748 898 aa7.71□□□□□ -1.18
NUP84YDL116W HMI1Q12039 706 aa7.71□□□□□ -1.18
NUP84YDL116W ACE2P21192 770 aa7.7□□□□□ -1.18
NUP84YDL116W EFM4P40516 257 aa7.7□□□□□ -1.18
NUP84YDL116W ENP2P48234 707 aaKnown RBP7.7□□□□□ -1.18
NUP84YDL116W RPS15Q01855 142 aaKnown RBP7.7□□□□□ -1.18
NUP84YDL116W OSH2Q12451 1283 aa7.7□□□□□ -1.18
NUP84YDL116W NBL1Q3E7Y6 73 aa7.7□□□□□ -1.18
NUP84YDL116W UBP14P38237 781 aaKnown RBP7.7□□□□□ -1.18
NUP84YDL116W SIC1P38634 284 aa7.7□□□□□ -1.18
NUP84YDL116W YJR079WP47126 109 aa7.7□□□□□ -1.18
NUP84YDL116W SMD2Q06217 110 aaKnown RBP7.7□□□□□ -1.18
NUP84YDL116W SPO75Q07798 868 aa7.7□□□□□ -1.18
NUP84YDL116W PHM7Q12252 991 aa7.7□□□□□ -1.18
NUP84YDL116W ADR1P07248 1323 aa7.69□□□□□ -1.18
NUP84YDL116W ARG4P04076 463 aaPredicted RBP7.69□□□□□ -1.18
NUP84YDL116W GFA1P14742 717 aaKnown RBP7.69□□□□□ -1.18
NUP84YDL116W MGM1P32266 881 aa7.69□□□□□ -1.18
NUP84YDL116W ANP1P32629 500 aa7.69□□□□□ -1.18
NUP84YDL116W XRS2P33301 854 aa7.69□□□□□ -1.18
NUP84YDL116W RXT2P38255 430 aa7.69□□□□□ -1.18
NUP84YDL116W YMR124WP39523 943 aaKnown RBP7.69□□□□□ -1.18
NUP84YDL116W ALF1P53904 254 aa7.69□□□□□ -1.18
NUP84YDL116W YMR114CQ04471 368 aaKnown RBP7.69□□□□□ -1.18
NUP84YDL116W POM152P39685 1337 aa7.69□□□□□ -1.18
NUP84YDL116W PRE10P21242 288 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
NUP84YDL116W CBP3P21560 335 aa7.69□□□□□ -1.18
NUP84YDL116W RIT1P23796 513 aa7.69□□□□□ -1.18
NUP84YDL116W HEM3P28789 327 aa7.69□□□□□ -1.18
NUP84YDL116W FOX2Q02207 900 aaKnown RBP7.69□□□□□ -1.18
NUP84YDL116W MRD1Q06106 887 aaKnown RBP7.69□□□□□ -1.18
NUP84YDL116W YAP7Q08182 245 aa7.69□□□□□ -1.18
NUP84YDL116W MPH3P0CE00 602 aa7.68□□□□□ -1.18
NUP84YDL116W BMH2P34730 273 aaKnown RBP7.68□□□□□ -1.18
NUP84YDL116W SWH1P35845 1188 aa7.68□□□□□ -1.18
NUP84YDL116W MCX1P38323 520 aaPredicted RBP7.68□□□□□ -1.18
NUP84YDL116W TAD1P53065 400 aa7.68□□□□□ -1.18
NUP84YDL116W TRS120Q04183 1289 aa7.68□□□□□ -1.18
NUP84YDL116W PPR1P07272 904 aaPredicted RBP7.67□□□□□ -1.18
NUP84YDL116W SEC23P15303 768 aaKnown RBP7.67□□□□□ -1.18
NUP84YDL116W MUD2P36084 527 aaKnown RBP7.67□□□□□ -1.18
NUP84YDL116W TIF4632P39936 914 aaKnown RBP7.67□□□□□ -1.18
NUP84YDL116W DOT5P40553 215 aa7.67□□□□□ -1.18
NUP84YDL116W DIG1Q03063 452 aaKnown RBP7.67□□□□□ -1.18
NUP84YDL116W YDR090CQ03193 310 aa7.67□□□□□ -1.18
NUP84YDL116W URH1Q04179 340 aa7.67□□□□□ -1.18
NUP84YDL116W ADY4Q05955 493 aa7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms