RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C FOL1P53848 824 aa6.64□□□□□ -1.35
MDH3YDL078C CLF1Q12309 687 aaPredicted RBP6.64□□□□□ -1.35
MDH3YDL078C SAM2P19358 384 aaKnown RBP6.63□□□□□ -1.35
MDH3YDL078C ACE2P21192 770 aa6.63□□□□□ -1.35
MDH3YDL078C PRO3P32263 286 aaKnown RBP6.63□□□□□ -1.35
MDH3YDL078C PAH1P32567 862 aa6.63□□□□□ -1.35
MDH3YDL078C MAC1P35192 417 aa6.63□□□□□ -1.35
MDH3YDL078C RER2P35196 286 aa6.63□□□□□ -1.35
MDH3YDL078C PTC4P38089 393 aa6.63□□□□□ -1.35
MDH3YDL078C MXR1P40029 184 aa6.63□□□□□ -1.35
MDH3YDL078C ATH1P48016 1211 aa6.63□□□□□ -1.35
MDH3YDL078C ALD6P54115 500 aaKnown RBP6.63□□□□□ -1.35
MDH3YDL078C ULP1Q02724 621 aa6.63□□□□□ -1.35
MDH3YDL078C VPS30Q02948 557 aa6.63□□□□□ -1.35
MDH3YDL078C CDC19P00549 500 aaKnown RBP6.62□□□□□ -1.35
MDH3YDL078C RAD18P10862 487 aa6.62□□□□□ -1.35
MDH3YDL078C CHL1P22516 861 aaPredicted RBP6.62□□□□□ -1.35
MDH3YDL078C RPL8BP29453 256 aaKnown RBP6.62□□□□□ -1.35
MDH3YDL078C SPC110P32380 944 aa6.62□□□□□ -1.35
MDH3YDL078C BCK2P33306 851 aa6.62□□□□□ -1.35
MDH3YDL078C PAM1P37304 830 aaKnown RBP6.62□□□□□ -1.35
MDH3YDL078C BRN1P38170 754 aa6.62□□□□□ -1.35
MDH3YDL078C VPS45P38932 577 aa6.62□□□□□ -1.35
MDH3YDL078C GCR2Q01722 534 aa6.62□□□□□ -1.35
MDH3YDL078C RPT6Q01939 405 aaKnown RBP6.62□□□□□ -1.35
MDH3YDL078C ICL2Q12031 575 aa6.62□□□□□ -1.35
MDH3YDL078C NUC1P08466 329 aa6.61□□□□□ -1.35
MDH3YDL078C MAK31P23059 88 aa6.61□□□□□ -1.35
MDH3YDL078C GUT1P32190 709 aa6.61□□□□□ -1.35
MDH3YDL078C IMP2'P32351 346 aa6.61□□□□□ -1.35
MDH3YDL078C YEL023CP39992 682 aa6.61□□□□□ -1.35
MDH3YDL078C ALG2P43636 503 aa6.61□□□□□ -1.35
MDH3YDL078C MET7Q08645 548 aa6.61□□□□□ -1.35
MDH3YDL078C PRE10P21242 288 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
MDH3YDL078C PEP3P27801 918 aa6.6□□□□□ -1.35
MDH3YDL078C SEC20P28791 383 aa6.6□□□□□ -1.35
MDH3YDL078C PHO88P38264 188 aaPredicted RBP6.6□□□□□ -1.35
MDH3YDL078C CIC1P38779 376 aaKnown RBP6.6□□□□□ -1.35
MDH3YDL078C TOM71P38825 639 aaKnown RBP6.6□□□□□ -1.35
MDH3YDL078C PTK2P47116 818 aaKnown RBP6.6□□□□□ -1.35
MDH3YDL078C YGR125WP53273 1036 aa6.6□□□□□ -1.35
MDH3YDL078C MYO5Q04439 1219 aaKnown RBP6.6□□□□□ -1.35
MDH3YDL078C ESF1Q06344 628 aaKnown RBP6.6□□□□□ -1.35
MDH3YDL078C UTR4P32626 227 aa6.59□□□□□ -1.35
MDH3YDL078C RGT1P32862 1170 aa6.59□□□□□ -1.35
MDH3YDL078C TGL1P34163 548 aa6.59□□□□□ -1.35
MDH3YDL078C SNF7P39929 240 aaKnown RBP6.59□□□□□ -1.35
MDH3YDL078C LSB1P53281 241 aa6.59□□□□□ -1.35
MDH3YDL078C VPS62P53285 467 aa6.59□□□□□ -1.35
MDH3YDL078C HDA1P53973 706 aa6.59□□□□□ -1.35
MDH3YDL078C DUS4Q06063 367 aa6.59□□□□□ -1.35
MDH3YDL078C EST2Q06163 884 aa6.59□□□□□ -1.35
MDH3YDL078C CSC1Q06538 782 aa6.59□□□□□ -1.35
MDH3YDL078C ECM29P38737 1868 aa6.58□□□□□ -1.36
MDH3YDL078C SAM1P10659 382 aaKnown RBP6.58□□□□□ -1.36
MDH3YDL078C SRP40P32583 406 aaPredicted RBP6.58□□□□□ -1.36
MDH3YDL078C LDH1P38139 375 aa6.58□□□□□ -1.36
MDH3YDL078C UBP14P38237 781 aaKnown RBP6.58□□□□□ -1.36
MDH3YDL078C PRE3P38624 215 aa6.58□□□□□ -1.36
MDH3YDL078C AIM21P40563 679 aa6.58□□□□□ -1.36
MDH3YDL078C PIL1P53252 339 aaKnown RBP6.58□□□□□ -1.36
MDH3YDL078C HXT17P53631 564 aa6.58□□□□□ -1.36
MDH3YDL078C YDR090CQ03193 310 aa6.58□□□□□ -1.36
MDH3YDL078C BUL2Q03758 920 aaKnown RBP6.58□□□□□ -1.36
MDH3YDL078C YLR326WQ06170 240 aaKnown RBP6.58□□□□□ -1.36
MDH3YDL078C TFC6Q06339 672 aa6.58□□□□□ -1.36
MDH3YDL078C UTP4Q06679 776 aaKnown RBP6.58□□□□□ -1.36
MDH3YDL078C PGA3Q12746 312 aaKnown RBP6.58□□□□□ -1.36
MDH3YDL078C DLD1P32891 587 aa6.57□□□□□ -1.36
MDH3YDL078C MAL31P38156 614 aa6.57□□□□□ -1.36
MDH3YDL078C OPY1P38271 328 aa6.57□□□□□ -1.36
MDH3YDL078C SPO22P40511 975 aa6.57□□□□□ -1.36
MDH3YDL078C MDM1Q01846 1127 aa6.57□□□□□ -1.36
MDH3YDL078C TMA64Q04600 565 aaKnown RBP6.57□□□□□ -1.36
MDH3YDL078C SPH1Q06160 661 aa6.57□□□□□ -1.36
MDH3YDL078C SUT2Q12286 268 aa6.57□□□□□ -1.36
MDH3YDL078C YOR131CQ12486 218 aa6.57□□□□□ -1.36
MDH3YDL078C VPS13Q07878 3144 aa6.57□□□□□ -1.36
MDH3YDL078C SRP54P20424 541 aaKnown RBP6.56□□□□□ -1.36
MDH3YDL078C MCR1P36060 302 aaKnown RBP6.56□□□□□ -1.36
MDH3YDL078C HXT13P39924 564 aa6.56□□□□□ -1.36
MDH3YDL078C TPM2P40414 161 aa6.56□□□□□ -1.36
MDH3YDL078C CSM2P40465 213 aa6.56□□□□□ -1.36
MDH3YDL078C YJR107WP47145 328 aa6.56□□□□□ -1.36
MDH3YDL078C ATF2P53296 535 aa6.56□□□□□ -1.36
MDH3YDL078C YGR273CP53329 174 aa6.56□□□□□ -1.36
MDH3YDL078C SLD5Q03406 294 aa6.56□□□□□ -1.36
MDH3YDL078C GUD1Q07729 489 aa6.56□□□□□ -1.36
MDH3YDL078C DSE3Q08729 430 aa6.56□□□□□ -1.36
MDH3YDL078C MSC6Q08818 692 aaKnown RBP6.56□□□□□ -1.36
MDH3YDL078C MYO1P08964 1928 aa6.55□□□□□ -1.36
MDH3YDL078C TY1B-AO13527 1196 aaKnown RBP6.55□□□□□ -1.36
MDH3YDL078C RPL8AP17076 256 aaKnown RBP6.55□□□□□ -1.36
MDH3YDL078C RNR3P21672 869 aaKnown RBP6.55□□□□□ -1.36
MDH3YDL078C PWP2P25635 923 aaKnown RBP6.55□□□□□ -1.36
MDH3YDL078C MCM4P30665 933 aaKnown RBP6.55□□□□□ -1.36
MDH3YDL078C SEC8P32855 1065 aa6.55□□□□□ -1.36
MDH3YDL078C SHP1P34223 423 aa6.55□□□□□ -1.36
MDH3YDL078C VPS53P47061 822 aa6.55□□□□□ -1.36
MDH3YDL078C BRE5P53741 515 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms