RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT2	YDL007W	FIR1	P40020	876 aa		6.29	□□□□□ -1.4
RPT2	YDL007W	RRT14	P40470	206 aa		6.29	□□□□□ -1.4
RPT2	YDL007W	QDR2	P40474	542 aa		6.29	□□□□□ -1.4
RPT2	YDL007W	QDR1	P40475	563 aa		6.29	□□□□□ -1.4
RPT2	YDL007W	HOS3	Q02959	697 aa	Known RBP	6.29	□□□□□ -1.4
RPT2	YDL007W	HPF1	Q05164	967 aa		6.29	□□□□□ -1.4
RPT2	YDL007W	ESC2	Q06340	456 aa		6.29	□□□□□ -1.4
RPT2	YDL007W	SYT1	Q06836	1226 aa		6.29	□□□□□ -1.4
RPT2	YDL007W	NUP145	P49687	1317 aa		6.29	□□□□□ -1.4
RPT2	YDL007W	VMA3	P25515	160 aa		6.28	□□□□□ -1.4
RPT2	YDL007W	YER156C	P40093	338 aa	Known RBP	6.28	□□□□□ -1.4
RPT2	YDL007W	CIR1	P42940	261 aa		6.28	□□□□□ -1.4
RPT2	YDL007W	JJJ3	P47138	172 aa		6.28	□□□□□ -1.4
RPT2	YDL007W	ATG1	P53104	897 aa		6.28	□□□□□ -1.4
RPT2	YDL007W	LSO1	Q3E827	93 aa		6.28	□□□□□ -1.4
RPT2	YDL007W	YRF1-4	O13559	1382 aa		6.28	□□□□□ -1.4
RPT2	YDL007W	SIR4	P11978	1358 aa		6.28	□□□□□ -1.4
RPT2	YDL007W	PSK1	P31374	1356 aa		6.28	□□□□□ -1.4
RPT2	YDL007W	YML133C	Q03099	1374 aa		6.28	□□□□□ -1.4
RPT2	YDL007W	YLL067C	Q07888	1374 aa		6.28	□□□□□ -1.4
RPT2	YDL007W	YLL066C	Q99208	1374 aa		6.28	□□□□□ -1.4
RPT2	YDL007W	CTT1	P06115	562 aa		6.27	□□□□□ -1.41
RPT2	YDL007W	ATE1	P16639	503 aa		6.27	□□□□□ -1.41
RPT2	YDL007W	RIX1	P38883	763 aa	Predicted RBP	6.27	□□□□□ -1.41
RPT2	YDL007W	CIN4	P39110	191 aa		6.27	□□□□□ -1.41
RPT2	YDL007W	RVS167	P39743	482 aa	Known RBP	6.27	□□□□□ -1.41
RPT2	YDL007W	CHZ1	P40019	153 aa	Predicted RBP	6.27	□□□□□ -1.41
RPT2	YDL007W	NPA3	P47122	385 aa		6.27	□□□□□ -1.41
RPT2	YDL007W	WHI5	Q12416	295 aa		6.27	□□□□□ -1.41
RPT2	YDL007W	PRD1	P25375	712 aa		6.26	□□□□□ -1.41
RPT2	YDL007W	TRK2	P28584	889 aa		6.26	□□□□□ -1.41
RPT2	YDL007W	RPN12	P32496	274 aa		6.26	□□□□□ -1.41
RPT2	YDL007W	LTV1	P34078	463 aa		6.26	□□□□□ -1.41
RPT2	YDL007W	ISW1	P38144	1129 aa		6.26	□□□□□ -1.41
RPT2	YDL007W	MAL31	P38156	614 aa		6.26	□□□□□ -1.41
RPT2	YDL007W	APM2	P38700	605 aa		6.26	□□□□□ -1.41
RPT2	YDL007W	TCD1	P38756	429 aa		6.26	□□□□□ -1.41
RPT2	YDL007W	BDH2	P39713	417 aa		6.26	□□□□□ -1.41
RPT2	YDL007W	CUS1	Q02554	436 aa	Predicted RBP	6.26	□□□□□ -1.41
RPT2	YDL007W	URB1	P34241	1764 aa	Known RBP	6.26	□□□□□ -1.41
RPT2	YDL007W	SPC110	P32380	944 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	MIC60	P36112	540 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	GIP1	P38229	639 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	YOR296W	Q08748	1289 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	ASF1	P32447	279 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	SMC1	P32908	1225 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	SWE1	P32944	819 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	HXT8	P40886	569 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	STU2	P46675	888 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	YGL081W	P53156	320 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	VPS60	Q03390	229 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	TAF8	Q03750	510 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	NUT2	Q06213	157 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	RTT109	Q07794	436 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	APC11	Q12157	165 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	FRT1	Q99332	602 aa		6.25	□□□□□ -1.41
RPT2	YDL007W	MED8	P38304	223 aa		6.24	□□□□□ -1.41
RPT2	YDL007W	ECM1	P39715	212 aa		6.24	□□□□□ -1.41
RPT2	YDL007W	ACF4	P47129	309 aa		6.24	□□□□□ -1.41
RPT2	YDL007W	HST1	P53685	503 aa		6.24	□□□□□ -1.41
RPT2	YDL007W	UFD2	P54860	961 aa		6.24	□□□□□ -1.41
RPT2	YDL007W	RSC2	Q06488	889 aa		6.24	□□□□□ -1.41
RPT2	YDL007W	NOP14	Q99207	810 aa	Known RBP	6.24	□□□□□ -1.41
RPT2	YDL007W	RAD50	P12753	1312 aa		6.23	□□□□□ -1.41
RPT2	YDL007W	PRP5	P21372	849 aa	Predicted RBP	6.23	□□□□□ -1.41
RPT2	YDL007W	BOI1	P38041	980 aa	Known RBP	6.23	□□□□□ -1.41
RPT2	YDL007W	PPX1	P38698	397 aa		6.23	□□□□□ -1.41
RPT2	YDL007W	YVH1	Q02256	364 aa	Known RBP	6.23	□□□□□ -1.41
RPT2	YDL007W	VPS20	Q04272	221 aa		6.23	□□□□□ -1.41
RPT2	YDL007W	NKP2	Q06162	153 aa		6.23	□□□□□ -1.41
RPT2	YDL007W	RRP15	Q06511	250 aa	Predicted RBP	6.23	□□□□□ -1.41
RPT2	YDL007W	SFI1	Q12369	946 aa		6.23	□□□□□ -1.41
RPT2	YDL007W	DUR1,2	P32528	1835 aa	Known RBP	6.22	□□□□□ -1.41
RPT2	YDL007W	CYC8	P14922	966 aa		6.22	□□□□□ -1.41
RPT2	YDL007W	BRN1	P38170	754 aa		6.22	□□□□□ -1.41
RPT2	YDL007W	PBY1	P38254	753 aa		6.22	□□□□□ -1.41
RPT2	YDL007W	DSN1	P40568	576 aa		6.22	□□□□□ -1.41
RPT2	YDL007W	ECM16	Q04217	1267 aa	Known RBP	6.22	□□□□□ -1.41
RPT2	YDL007W	HRQ1	Q05549	1077 aa		6.22	□□□□□ -1.41
RPT2	YDL007W	YPR117W	Q06116	2489 aa		6.21	□□□□□ -1.42
RPT2	YDL007W	CLB1	P24868	471 aa		6.21	□□□□□ -1.42
RPT2	YDL007W	DEP1	P31385	405 aa		6.21	□□□□□ -1.42
RPT2	YDL007W	SEC8	P32855	1065 aa		6.21	□□□□□ -1.42
RPT2	YDL007W	MET1	P36150	593 aa		6.21	□□□□□ -1.42
RPT2	YDL007W	OYE2	Q03558	400 aa	Known RBP	6.21	□□□□□ -1.42
RPT2	YDL007W	AI1	P03875	834 aa		6.2	□□□□□ -1.42
RPT2	YDL007W	KAR2	P16474	682 aa	Known RBP	6.2	□□□□□ -1.42
RPT2	YDL007W	MSN1	P22148	382 aa		6.2	□□□□□ -1.42
RPT2	YDL007W	HXT13	P39924	564 aa		6.2	□□□□□ -1.42
RPT2	YDL007W	RSM25	P40496	264 aa		6.2	□□□□□ -1.42
RPT2	YDL007W	CEP3	P40969	608 aa		6.2	□□□□□ -1.42
RPT2	YDL007W	KRI1	P42846	591 aa	Known RBP	6.2	□□□□□ -1.42
RPT2	YDL007W	SUT1	P53032	299 aa	Known RBP	6.2	□□□□□ -1.42
RPT2	YDL007W	TY1A-DR2	Q03964	440 aa	Known RBP	6.2	□□□□□ -1.42
RPT2	YDL007W	BMS1	Q08965	1183 aa	Known RBP	6.2	□□□□□ -1.42
RPT2	YDL007W	TIF6	Q12522	245 aa	Known RBP	6.2	□□□□□ -1.42
RPT2	YDL007W	MET4	P32389	672 aa		6.19	□□□□□ -1.42
RPT2	YDL007W	MPE1	P35728	441 aa	Known RBP	6.19	□□□□□ -1.42
RPT2	YDL007W	YKL222C	P35995	705 aa		6.19	□□□□□ -1.42
RPT2	YDL007W	DID4	P36108	232 aa		6.19	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 75.2 ms