RNA–Protein interactions for RNA: YCR093W

CDC39, Transcript of Component of the CCR4-NOT1 core complex, yeastyeast

Gene CDC39, Length 6,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC39YCR093W CNN1P43618 361 aa1.56□□□□□ -2.16
CDC39YCR093W CAF120P53836 1060 aa1.56□□□□□ -2.16
CDC39YCR093W GDE1Q02979 1223 aa1.56□□□□□ -2.16
CDC39YCR093W TY1A-BLQ12266 440 aa1.56□□□□□ -2.16
CDC39YCR093W CDC34P14682 295 aa1.56□□□□□ -2.16
CDC39YCR093W PPH3P32345 308 aa1.56□□□□□ -2.16
CDC39YCR093W DLD1P32891 587 aa1.56□□□□□ -2.16
CDC39YCR093W YGR125WP53273 1036 aa1.56□□□□□ -2.16
CDC39YCR093W ELG1Q12050 791 aa1.56□□□□□ -2.16
CDC39YCR093W PTC5Q12511 572 aa1.56□□□□□ -2.16
CDC39YCR093W PHO4P07270 312 aaKnown RBP1.56□□□□□ -2.16
CDC39YCR093W TRL1P09880 827 aaKnown RBP1.56□□□□□ -2.16
CDC39YCR093W PEX28P38848 579 aa1.56□□□□□ -2.16
CDC39YCR093W RPN3P40016 523 aaKnown RBP1.56□□□□□ -2.16
CDC39YCR093W RGD2P43556 714 aa1.56□□□□□ -2.16
CDC39YCR093W PRP43P53131 767 aaKnown RBP1.56□□□□□ -2.16
CDC39YCR093W SIW14P53965 281 aa1.56□□□□□ -2.16
CDC39YCR093W CHS2P14180 963 aa1.55□□□□□ -2.16
CDC39YCR093W SPC42P36094 363 aa1.55□□□□□ -2.16
CDC39YCR093W XKS1P42826 600 aa1.55□□□□□ -2.16
CDC39YCR093W TNA1P53322 534 aa1.55□□□□□ -2.16
CDC39YCR093W PAP2P53632 584 aaKnown RBP1.55□□□□□ -2.16
CDC39YCR093W GPD1Q00055 391 aaKnown RBP1.55□□□□□ -2.16
CDC39YCR093W HOS3Q02959 697 aaKnown RBP1.55□□□□□ -2.16
CDC39YCR093W EST2Q06163 884 aa1.55□□□□□ -2.16
CDC39YCR093W SPS1P08458 490 aa1.55□□□□□ -2.16
CDC39YCR093W MSN1P22148 382 aa1.55□□□□□ -2.16
CDC39YCR093W YKR078WP36158 585 aaKnown RBP1.55□□□□□ -2.16
CDC39YCR093W APT2P36973 181 aa1.55□□□□□ -2.16
CDC39YCR093W ITC1P53125 1264 aa1.55□□□□□ -2.16
CDC39YCR093W ULP1Q02724 621 aa1.55□□□□□ -2.16
CDC39YCR093W DOT1Q04089 582 aaKnown RBP1.55□□□□□ -2.16
CDC39YCR093W GIS4Q04233 774 aa1.55□□□□□ -2.16
CDC39YCR093W FRT1Q99332 602 aa1.55□□□□□ -2.16
CDC39YCR093W DED1P06634 604 aaKnown RBP1.55□□□□□ -2.16
CDC39YCR093W CYC8P14922 966 aa1.55□□□□□ -2.16
CDC39YCR093W RGD1P38339 666 aa1.55□□□□□ -2.16
CDC39YCR093W YPL109CQ02981 657 aa1.55□□□□□ -2.16
CDC39YCR093W ACM1Q08981 209 aa1.55□□□□□ -2.16
CDC39YCR093W GNT1Q12096 491 aa1.55□□□□□ -2.16
CDC39YCR093W CIT2P08679 460 aa1.55□□□□□ -2.16
CDC39YCR093W MET4P32389 672 aa1.55□□□□□ -2.16
CDC39YCR093W PGM2P37012 569 aaKnown RBP1.55□□□□□ -2.16
CDC39YCR093W YHL012WP38709 493 aa1.55□□□□□ -2.16
CDC39YCR093W LCD1Q04377 747 aa1.55□□□□□ -2.16
CDC39YCR093W RPS9AO13516 197 aaKnown RBP1.55□□□□□ -2.16
CDC39YCR093W LYP1P32487 611 aa1.55□□□□□ -2.16
CDC39YCR093W SUB1P54000 292 aaKnown RBP1.55□□□□□ -2.16
CDC39YCR093W YLL058WQ12198 575 aa1.55□□□□□ -2.16
CDC39YCR093W TY4B-PA0A0B7P3V8 1104 aa1.54□□□□□ -2.16
CDC39YCR093W RPS31P05759 152 aaKnown RBP1.54□□□□□ -2.16
CDC39YCR093W SBP1P10080 294 aaKnown RBP1.54□□□□□ -2.16
CDC39YCR093W PHO8P11491 566 aa1.54□□□□□ -2.16
CDC39YCR093W RAD4P14736 754 aa1.54□□□□□ -2.16
CDC39YCR093W IRR1P40541 1150 aa1.54□□□□□ -2.16
CDC39YCR093W SEC26P41810 973 aaKnown RBP1.54□□□□□ -2.16
CDC39YCR093W GYP8P43570 497 aa1.54□□□□□ -2.16
CDC39YCR093W PPT1P53043 513 aa1.54□□□□□ -2.16
CDC39YCR093W MEC3Q02574 474 aa1.54□□□□□ -2.16
CDC39YCR093W MNL2Q12205 849 aa1.54□□□□□ -2.16
CDC39YCR093W SPO21Q12411 609 aa1.54□□□□□ -2.16
CDC39YCR093W YPR053CQ6Q5F3 151 aa1.54□□□□□ -2.16
CDC39YCR093W TY4A-HQ6Q5P6 413 aa1.54□□□□□ -2.16
CDC39YCR093W RPS4AP0CX35 261 aaKnown RBP1.54□□□□□ -2.16
CDC39YCR093W RPS4BP0CX36 261 aaKnown RBP1.54□□□□□ -2.16
CDC39YCR093W TRK2P28584 889 aa1.54□□□□□ -2.16
CDC39YCR093W YEL1P34225 687 aa1.54□□□□□ -2.16
CDC39YCR093W DOT6P40059 670 aaKnown RBP1.54□□□□□ -2.16
CDC39YCR093W MMM1P41800 426 aa1.54□□□□□ -2.16
CDC39YCR093W ZDS1P50111 915 aaKnown RBP1.54□□□□□ -2.16
CDC39YCR093W YBP2P53169 641 aa1.54□□□□□ -2.16
CDC39YCR093W YNR063WP53749 607 aa1.54□□□□□ -2.16
CDC39YCR093W YDR514CQ04408 483 aa1.54□□□□□ -2.16
CDC39YCR093W SYT1Q06836 1226 aa1.54□□□□□ -2.16
CDC39YCR093W PPM2Q08282 695 aa1.54□□□□□ -2.16
CDC39YCR093W SUV3P32580 737 aa1.54□□□□□ -2.16
CDC39YCR093W DAK2P43550 591 aa1.54□□□□□ -2.16
CDC39YCR093W IOC3P43596 787 aa1.54□□□□□ -2.16
CDC39YCR093W OSW2Q12202 724 aa1.54□□□□□ -2.16
CDC39YCR093W CDC48P25694 835 aaKnown RBP1.54□□□□□ -2.16
CDC39YCR093W MRPL36P36531 177 aa1.54□□□□□ -2.16
CDC39YCR093W YGL140CP53120 1219 aa1.54□□□□□ -2.16
CDC39YCR093W VPS16Q03308 798 aa1.54□□□□□ -2.16
CDC39YCR093W RSM24Q03976 319 aa1.54□□□□□ -2.16
CDC39YCR093W NTE1Q04958 1679 aa1.54□□□□□ -2.16
CDC39YCR093W SWC3P31376 625 aa1.54□□□□□ -2.16
CDC39YCR093W RPC82P32349 654 aa1.54□□□□□ -2.16
CDC39YCR093W RRM3P38766 723 aa1.54□□□□□ -2.16
CDC39YCR093W NSE3Q05541 303 aa1.54□□□□□ -2.16
CDC39YCR093W DUS3Q06053 668 aaKnown RBP1.54□□□□□ -2.16
CDC39YCR093W WHI5Q12416 295 aa1.54□□□□□ -2.16
CDC39YCR093W RPO31P04051 1460 aa1.54□□□□□ -2.16
CDC39YCR093W MET5P47169 1442 aa1.53□□□□□ -2.16
CDC39YCR093W RAS1P01119 309 aa1.53□□□□□ -2.16
CDC39YCR093W RPB10P22139 70 aa1.53□□□□□ -2.16
CDC39YCR093W SEC15P22224 910 aa1.53□□□□□ -2.16
CDC39YCR093W BSD2P38356 321 aa1.53□□□□□ -2.16
CDC39YCR093W GIP2P40036 548 aa1.53□□□□□ -2.16
CDC39YCR093W SAP155P43612 1002 aa1.53□□□□□ -2.16
CDC39YCR093W ENP2P48234 707 aaKnown RBP1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms