RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C YBR287WP38355 427 aa1.83□□□□□ -2.12
MSH3YCR092C UBP12P39538 1254 aa1.83□□□□□ -2.12
MSH3YCR092C TIF4631P39935 952 aaKnown RBP1.83□□□□□ -2.12
MSH3YCR092C NIT1P40447 199 aa1.83□□□□□ -2.12
MSH3YCR092C FET4P40988 552 aa1.83□□□□□ -2.12
MSH3YCR092C KRI1P42846 591 aaKnown RBP1.83□□□□□ -2.12
MSH3YCR092C YFL034WP43564 1073 aa1.83□□□□□ -2.12
MSH3YCR092C IOC3P43596 787 aa1.83□□□□□ -2.12
MSH3YCR092C GYP7P48365 746 aa1.83□□□□□ -2.12
MSH3YCR092C SKG3Q06315 1026 aa1.83□□□□□ -2.12
MSH3YCR092C RIX7Q07844 837 aaKnown RBP1.83□□□□□ -2.12
MSH3YCR092C RAD59Q12223 238 aa1.83□□□□□ -2.12
MSH3YCR092C AI1P03875 834 aa1.82□□□□□ -2.12
MSH3YCR092C GCD7P32502 381 aaPredicted RBP1.82□□□□□ -2.12
MSH3YCR092C OCT1P35999 772 aa1.82□□□□□ -2.12
MSH3YCR092C APL2P36000 726 aaPredicted RBP1.82□□□□□ -2.12
MSH3YCR092C GLY1P37303 387 aaKnown RBP1.82□□□□□ -2.12
MSH3YCR092C YAP1801P38856 637 aa1.82□□□□□ -2.12
MSH3YCR092C MMF1P40185 145 aaKnown RBP1.82□□□□□ -2.12
MSH3YCR092C CDC19P00549 500 aaKnown RBP1.82□□□□□ -2.12
MSH3YCR092C PHR1P05066 565 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
MSH3YCR092C RPS19AP07280 144 aaKnown RBP1.82□□□□□ -2.12
MSH3YCR092C RPS19BP07281 144 aaPredicted RBP1.82□□□□□ -2.12
MSH3YCR092C SER1P33330 395 aaKnown RBP1.82□□□□□ -2.12
MSH3YCR092C ZDS1P50111 915 aaKnown RBP1.82□□□□□ -2.12
MSH3YCR092C MTC3P53077 123 aa1.82□□□□□ -2.12
MSH3YCR092C YNR021WP53723 404 aaKnown RBP1.82□□□□□ -2.12
MSH3YCR092C THI72Q08579 599 aa1.82□□□□□ -2.12
MSH3YCR092C FLO11P08640 1367 aa1.82□□□□□ -2.12
MSH3YCR092C VAC17P25591 423 aa1.82□□□□□ -2.12
MSH3YCR092C ASF1P32447 279 aa1.82□□□□□ -2.12
MSH3YCR092C ECM2P38241 364 aaKnown RBP1.82□□□□□ -2.12
MSH3YCR092C TPS3P38426 1054 aaKnown RBP1.82□□□□□ -2.12
MSH3YCR092C SQS1P53866 767 aaKnown RBP1.82□□□□□ -2.12
MSH3YCR092C SNF3P10870 884 aa1.81□□□□□ -2.12
MSH3YCR092C RSC8P43609 557 aaKnown RBP1.81□□□□□ -2.12
MSH3YCR092C CIT3P43635 486 aa1.81□□□□□ -2.12
MSH3YCR092C APL6P46682 809 aa1.81□□□□□ -2.12
MSH3YCR092C YJL007CP47080 104 aa1.81□□□□□ -2.12
MSH3YCR092C MMR1Q06324 491 aa1.81□□□□□ -2.12
MSH3YCR092C ISA1Q07821 250 aaPredicted RBP1.81□□□□□ -2.12
MSH3YCR092C MET7Q08645 548 aa1.81□□□□□ -2.12
MSH3YCR092C FUN12P39730 1002 aaKnown RBP1.81□□□□□ -2.12
MSH3YCR092C ART5P53244 586 aaKnown RBP1.81□□□□□ -2.12
MSH3YCR092C PDS5Q04264 1277 aa1.81□□□□□ -2.12
MSH3YCR092C DAP1Q12091 152 aa1.81□□□□□ -2.12
MSH3YCR092C TY1A-BLQ12266 440 aa1.81□□□□□ -2.12
MSH3YCR092C PRD1P25375 712 aa1.8□□□□□ -2.12
MSH3YCR092C TRK2P28584 889 aa1.8□□□□□ -2.12
MSH3YCR092C TAT1P38085 619 aa1.8□□□□□ -2.12
MSH3YCR092C LDH1P38139 375 aa1.8□□□□□ -2.12
MSH3YCR092C RIM4P38741 713 aa1.8□□□□□ -2.12
MSH3YCR092C KTR7P40504 517 aa1.8□□□□□ -2.12
MSH3YCR092C YIR007WP40566 764 aa1.8□□□□□ -2.12
MSH3YCR092C YGR125WP53273 1036 aa1.8□□□□□ -2.12
MSH3YCR092C CUS1Q02554 436 aaPredicted RBP1.8□□□□□ -2.12
MSH3YCR092C RAD53P22216 821 aa1.8□□□□□ -2.12
MSH3YCR092C YJU3P28321 313 aa1.8□□□□□ -2.12
MSH3YCR092C HSP104P31539 908 aaKnown RBP1.8□□□□□ -2.12
MSH3YCR092C MAL31P38156 614 aa1.8□□□□□ -2.12
MSH3YCR092C KSP1P38691 1029 aaKnown RBP1.8□□□□□ -2.12
MSH3YCR092C TOM71P38825 639 aaKnown RBP1.8□□□□□ -2.12
MSH3YCR092C AAD14P42884 376 aa1.8□□□□□ -2.12
MSH3YCR092C LYS5P50113 272 aa1.8□□□□□ -2.12
MSH3YCR092C ADE12P80210 433 aaKnown RBP1.8□□□□□ -2.12
MSH3YCR092C YVH1Q02256 364 aaKnown RBP1.8□□□□□ -2.12
MSH3YCR092C GIN4Q12263 1142 aa1.8□□□□□ -2.12
MSH3YCR092C FBP1P09201 348 aa1.8□□□□□ -2.12
MSH3YCR092C OPI1P21957 404 aa1.8□□□□□ -2.12
MSH3YCR092C LCB1P25045 558 aaKnown RBP1.8□□□□□ -2.12
MSH3YCR092C GLO3P38682 493 aaKnown RBP1.8□□□□□ -2.12
MSH3YCR092C RPN1P38764 993 aaKnown RBP1.8□□□□□ -2.12
MSH3YCR092C YFH7P43591 353 aa1.8□□□□□ -2.12
MSH3YCR092C LSB3P43603 459 aaKnown RBP1.8□□□□□ -2.12
MSH3YCR092C ALD6P54115 500 aaKnown RBP1.8□□□□□ -2.12
MSH3YCR092C EAF1Q06337 982 aa1.8□□□□□ -2.12
MSH3YCR092C CFT2Q12102 859 aaPredicted RBP1.8□□□□□ -2.12
MSH3YCR092C UBR2Q07963 1872 aa1.79□□□□□ -2.12
MSH3YCR092C FUB1P25659 250 aa1.79□□□□□ -2.12
MSH3YCR092C HAL5P38970 855 aaKnown RBP1.79□□□□□ -2.12
MSH3YCR092C OYE3P41816 400 aaPredicted RBP1.79□□□□□ -2.12
MSH3YCR092C EMW1P42842 904 aaKnown RBP1.79□□□□□ -2.12
MSH3YCR092C HPF1Q05164 967 aa1.79□□□□□ -2.12
MSH3YCR092C THS1P04801 734 aaKnown RBP1.79□□□□□ -2.12
MSH3YCR092C FPS1P23900 669 aa1.79□□□□□ -2.12
MSH3YCR092C KTR1P27810 393 aaKnown RBP1.79□□□□□ -2.12
MSH3YCR092C PAH1P32567 862 aa1.79□□□□□ -2.12
MSH3YCR092C BUD16P39988 312 aa1.79□□□□□ -2.12
MSH3YCR092C YJR098CP47139 656 aa1.79□□□□□ -2.12
MSH3YCR092C NUP84P52891 726 aa1.79□□□□□ -2.12
MSH3YCR092C ITC1P53125 1264 aa1.79□□□□□ -2.12
MSH3YCR092C HIM1Q06674 414 aa1.79□□□□□ -2.12
MSH3YCR092C PRE10P21242 288 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
MSH3YCR092C ICL1P28240 557 aaPredicted RBP1.78□□□□□ -2.12
MSH3YCR092C GPT2P36148 743 aa1.78□□□□□ -2.12
MSH3YCR092C HMF1P40037 129 aaKnown RBP1.78□□□□□ -2.12
MSH3YCR092C YNR061CP53747 219 aa1.78□□□□□ -2.12
MSH3YCR092C AIM7Q12156 149 aa1.78□□□□□ -2.12
MSH3YCR092C MYO1P08964 1928 aa1.78□□□□□ -2.12
MSH3YCR092C ECM29P38737 1868 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms