RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeastyeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB1YCL054W GPM1P00950 247 aaKnown RBP3.49□□□□□ -1.85
SPB1YCL054W IRE1P32361 1115 aa3.49□□□□□ -1.85
SPB1YCL054W YHL008CP38750 627 aa3.49□□□□□ -1.85
SPB1YCL054W DYS1P38791 387 aa3.49□□□□□ -1.85
SPB1YCL054W EMG1Q06287 252 aaKnown RBP3.49□□□□□ -1.85
SPB1YCL054W NTE1Q04958 1679 aa3.49□□□□□ -1.85
SPB1YCL054W NUG1P40010 520 aaKnown RBP3.48□□□□□ -1.85
SPB1YCL054W JJJ2P46997 583 aa3.48□□□□□ -1.85
SPB1YCL054W TYW3P53177 273 aa3.48□□□□□ -1.85
SPB1YCL054W ADI1Q03677 179 aa3.48□□□□□ -1.85
SPB1YCL054W TY1A-DR3Q12441 440 aa3.48□□□□□ -1.85
SPB1YCL054W POB3Q04636 552 aaKnown RBP3.48□□□□□ -1.85
SPB1YCL054W VPS15P22219 1454 aa3.48□□□□□ -1.85
SPB1YCL054W YRF1-1P0CX20 1796 aa3.48□□□□□ -1.85
SPB1YCL054W YRF1-5P0CX21 1796 aa3.48□□□□□ -1.85
SPB1YCL054W YRF1-8P0CX22 1796 aa3.48□□□□□ -1.85
SPB1YCL054W MYO4P32492 1471 aa3.47□□□□□ -1.85
SPB1YCL054W ERR1P0CX10 437 aa3.47□□□□□ -1.85
SPB1YCL054W ERR2P0CX11 437 aa3.47□□□□□ -1.85
SPB1YCL054W SLA1P32790 1244 aa3.47□□□□□ -1.85
SPB1YCL054W SWE1P32944 819 aa3.47□□□□□ -1.85
SPB1YCL054W UBP12P39538 1254 aa3.47□□□□□ -1.85
SPB1YCL054W HXT13P39924 564 aa3.47□□□□□ -1.85
SPB1YCL054W NUT1P53114 1132 aa3.47□□□□□ -1.85
SPB1YCL054W RTS3P53289 263 aa3.47□□□□□ -1.85
SPB1YCL054W HXT17P53631 564 aa3.47□□□□□ -1.85
SPB1YCL054W HXT15P54854 567 aa3.47□□□□□ -1.85
SPB1YCL054W MSH6Q03834 1242 aa3.47□□□□□ -1.85
SPB1YCL054W TDA5Q06417 326 aaKnown RBP3.47□□□□□ -1.85
SPB1YCL054W FLC1Q08967 793 aa3.47□□□□□ -1.85
SPB1YCL054W BNI1P41832 1953 aa3.47□□□□□ -1.85
SPB1YCL054W MET6P05694 767 aaKnown RBP3.47□□□□□ -1.85
SPB1YCL054W SSB1P11484 613 aaKnown RBP3.47□□□□□ -1.85
SPB1YCL054W MRPL16P38064 232 aa3.47□□□□□ -1.85
SPB1YCL054W RSP5P39940 809 aaKnown RBP3.47□□□□□ -1.85
SPB1YCL054W SSB2P40150 613 aaKnown RBP3.47□□□□□ -1.85
SPB1YCL054W SAP155P43612 1002 aa3.47□□□□□ -1.85
SPB1YCL054W KAP122P32767 1081 aa3.46□□□□□ -1.85
SPB1YCL054W GIP1P38229 639 aa3.46□□□□□ -1.85
SPB1YCL054W ENP1P38333 483 aaKnown RBP3.46□□□□□ -1.85
SPB1YCL054W PFD1P46988 109 aa3.46□□□□□ -1.85
SPB1YCL054W MON1P53129 644 aa3.46□□□□□ -1.85
SPB1YCL054W NAN1Q02931 896 aaKnown RBP3.46□□□□□ -1.85
SPB1YCL054W ESC2Q06340 456 aa3.46□□□□□ -1.85
SPB1YCL054W YOR296WQ08748 1289 aa3.46□□□□□ -1.85
SPB1YCL054W YOR131CQ12486 218 aa3.46□□□□□ -1.85
SPB1YCL054W RPO21P04050 1733 aaKnown RBP3.46□□□□□ -1.85
SPB1YCL054W PUF4P25339 888 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86 RIP-Chip
SPB1YCL054W KNS1P32350 737 aaPredicted RBP3.46□□□□□ -1.86
SPB1YCL054W ISW1P38144 1129 aa3.46□□□□□ -1.86
SPB1YCL054W SEA4P38164 1038 aa3.46□□□□□ -1.86
SPB1YCL054W TIM54P47045 478 aa3.46□□□□□ -1.86
SPB1YCL054W RTT10Q08924 1013 aa3.46□□□□□ -1.86
SPB1YCL054W PHO8P11491 566 aa3.45□□□□□ -1.86
SPB1YCL054W PYC2P32327 1180 aaKnown RBP3.45□□□□□ -1.86
SPB1YCL054W YBR184WP38299 523 aa3.45□□□□□ -1.86
SPB1YCL054W FIR1P40020 876 aa3.45□□□□□ -1.86
SPB1YCL054W ITC1P53125 1264 aa3.45□□□□□ -1.86
SPB1YCL054W DNM1P54861 757 aa3.45□□□□□ -1.86
SPB1YCL054W SNQ2P32568 1501 aaKnown RBP3.45□□□□□ -1.86
SPB1YCL054W RIM11P38615 370 aa3.45□□□□□ -1.86
SPB1YCL054W DRS2P39524 1355 aa3.45□□□□□ -1.86
SPB1YCL054W CAN1P04817 590 aa3.44□□□□□ -1.86
SPB1YCL054W CHZ1P40019 153 aaPredicted RBP3.44□□□□□ -1.86
SPB1YCL054W YIL165CP40446 119 aa3.44□□□□□ -1.86
SPB1YCL054W LSB6P42951 607 aa3.44□□□□□ -1.86
SPB1YCL054W SKP1P52286 194 aa3.44□□□□□ -1.86
SPB1YCL054W HDA2Q06629 674 aa3.44□□□□□ -1.86
SPB1YCL054W PSH1Q12161 406 aa3.44□□□□□ -1.86
SPB1YCL054W REC8Q12188 680 aa3.44□□□□□ -1.86
SPB1YCL054W PDC5P16467 563 aaKnown RBP3.44□□□□□ -1.86
SPB1YCL054W BAS1P22035 811 aa3.44□□□□□ -1.86
SPB1YCL054W RPL8BP29453 256 aaKnown RBP3.44□□□□□ -1.86
SPB1YCL054W XKS1P42826 600 aa3.44□□□□□ -1.86
SPB1YCL054W ZDS1P50111 915 aaKnown RBP3.44□□□□□ -1.86
SPB1YCL054W FAL1Q12099 399 aaKnown RBP3.44□□□□□ -1.86
SPB1YCL054W YDR215CQ12240 137 aa3.44□□□□□ -1.86
SPB1YCL054W CMR1Q12510 522 aaKnown RBP3.44□□□□□ -1.86
SPB1YCL054W MMS1Q06211 1407 aa3.44□□□□□ -1.86
SPB1YCL054W STH1P32597 1359 aa3.44□□□□□ -1.86
SPB1YCL054W LEU1P07264 779 aaKnown RBP3.43□□□□□ -1.86
SPB1YCL054W SEC23P15303 768 aaKnown RBP3.43□□□□□ -1.86
SPB1YCL054W KAR2P16474 682 aaKnown RBP3.43□□□□□ -1.86
SPB1YCL054W PRP5P21372 849 aaPredicted RBP3.43□□□□□ -1.86
SPB1YCL054W PDC6P26263 563 aaKnown RBP3.43□□□□□ -1.86
SPB1YCL054W RDH54P38086 958 aa3.43□□□□□ -1.86
SPB1YCL054W AIM46P38885 310 aa3.43□□□□□ -1.86
SPB1YCL054W RVS167P39743 482 aaKnown RBP3.43□□□□□ -1.86
SPB1YCL054W MAL11P53048 616 aa3.43□□□□□ -1.86
SPB1YCL054W YGL140CP53120 1219 aa3.43□□□□□ -1.86
SPB1YCL054W CUS1Q02554 436 aaPredicted RBP3.43□□□□□ -1.86
SPB1YCL054W NOG1Q02892 647 aaKnown RBP3.43□□□□□ -1.86
SPB1YCL054W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
SPB1YCL054W YLR125WQ12138 136 aa3.43□□□□□ -1.86
SPB1YCL054W YGR161W-CQ3E744 92 aa3.43□□□□□ -1.86
SPB1YCL054W TRP2P00899 507 aaKnown RBP3.43□□□□□ -1.86
SPB1YCL054W RER2P35196 286 aa3.43□□□□□ -1.86
SPB1YCL054W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
SPB1YCL054W YNR040WP53736 256 aa3.43□□□□□ -1.86
SPB1YCL054W FMP25Q08023 583 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms