RNA–Protein interactions for RNA: YCL028W

RNQ1, Transcript of [PIN(+)] prion, yeastyeast

Gene RNQ1, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RNQ1YCL028W LYS14P40971 790 aa12.67□□□□□ -0.38
RNQ1YCL028W ASE1P50275 885 aa12.67□□□□□ -0.38
RNQ1YCL028W SMD2Q06217 110 aaKnown RBP12.67□□□□□ -0.38
RNQ1YCL028W VIP1Q06685 1146 aaKnown RBP12.67□□□□□ -0.38
RNQ1YCL028W TYW1Q08960 810 aaKnown RBP12.67□□□□□ -0.38
RNQ1YCL028W APC11Q12157 165 aa12.67□□□□□ -0.38
RNQ1YCL028W HXK1P04806 485 aaKnown RBP12.66□□□□□ -0.38
RNQ1YCL028W FBP1P09201 348 aa12.66□□□□□ -0.38
RNQ1YCL028W RGP1P16664 663 aa12.66□□□□□ -0.38
RNQ1YCL028W RPL8AP17076 256 aaKnown RBP12.66□□□□□ -0.38
RNQ1YCL028W ELM1P32801 640 aa12.66□□□□□ -0.38
RNQ1YCL028W MAP2P38174 421 aaKnown RBP12.66□□□□□ -0.38
RNQ1YCL028W CCT3P39077 534 aaKnown RBP12.66□□□□□ -0.38
RNQ1YCL028W FAR11P53917 953 aa12.66□□□□□ -0.38
RNQ1YCL028W YML037CQ03703 340 aa12.66□□□□□ -0.38
RNQ1YCL028W FRS2P15625 503 aaKnown RBP12.65□□□□□ -0.38
RNQ1YCL028W RSM25P40496 264 aa12.65□□□□□ -0.38
RNQ1YCL028W ARP8Q12386 881 aaKnown RBP RIP-Chip data12.65□□□□□ -0.38not detected
RNQ1YCL028W PWP2P25635 923 aaKnown RBP12.64□□□□□ -0.39
RNQ1YCL028W SAS3P34218 831 aa12.64□□□□□ -0.39
RNQ1YCL028W PCS60P38137 543 aaKnown RBP RIP-Chip data12.64□□□□□ -0.39not detected
RNQ1YCL028W YJL007CP47080 104 aa12.64□□□□□ -0.39
RNQ1YCL028W AIM44Q99299 758 aa12.64□□□□□ -0.39
RNQ1YCL028W YDJ1P25491 409 aaKnown RBP12.63□□□□□ -0.39
RNQ1YCL028W RVS167P39743 482 aaKnown RBP12.63□□□□□ -0.39
RNQ1YCL028W VAB2P40003 282 aa12.63□□□□□ -0.39
RNQ1YCL028W EIS1Q05050 843 aaKnown RBP12.63□□□□□ -0.39
RNQ1YCL028W TIP41Q12199 356 aa12.63□□□□□ -0.39
RNQ1YCL028W RAD18P10862 487 aa12.62□□□□□ -0.39
RNQ1YCL028W THR4P16120 514 aaKnown RBP12.62□□□□□ -0.39
RNQ1YCL028W PER1P25625 357 aa12.62□□□□□ -0.39
RNQ1YCL028W DID4P36108 232 aa12.62□□□□□ -0.39
RNQ1YCL028W BNI5P53890 448 aaKnown RBP12.62□□□□□ -0.39
RNQ1YCL028W ETT1Q08421 412 aaKnown RBP12.62□□□□□ -0.39
RNQ1YCL028W YOR296WQ08748 1289 aa12.62□□□□□ -0.39
RNQ1YCL028W NDT80P38830 627 aa12.61□□□□□ -0.39
RNQ1YCL028W FMS1P50264 508 aa12.61□□□□□ -0.39
RNQ1YCL028W TRS120Q04183 1289 aa12.61□□□□□ -0.39
RNQ1YCL028W CSM3Q04659 317 aa12.61□□□□□ -0.39
RNQ1YCL028W DDP1Q99321 188 aaKnown RBP12.61□□□□□ -0.39
RNQ1YCL028W URA1P28272 314 aaPredicted RBP12.6□□□□□ -0.39
RNQ1YCL028W RPN12P32496 274 aa12.6□□□□□ -0.39
RNQ1YCL028W MCD4P36051 919 aa12.6□□□□□ -0.39
RNQ1YCL028W RFT1P38206 574 aaPredicted RBP12.6□□□□□ -0.39
RNQ1YCL028W PHO88P38264 188 aaPredicted RBP12.6□□□□□ -0.39
RNQ1YCL028W BSD2P38356 321 aa12.6□□□□□ -0.39
RNQ1YCL028W RET3P53600 189 aa12.6□□□□□ -0.39
RNQ1YCL028W DSE4P53753 1117 aa12.6□□□□□ -0.39
RNQ1YCL028W RTC4P53850 401 aa12.6□□□□□ -0.39
RNQ1YCL028W CLC1P17891 233 aa12.59□□□□□ -0.39
RNQ1YCL028W NET1P47035 1189 aa12.59□□□□□ -0.39
RNQ1YCL028W UBX5Q06682 500 aa12.59□□□□□ -0.39
RNQ1YCL028W PTC5Q12511 572 aa12.59□□□□□ -0.39
RNQ1YCL028W HVG1P0CE11 249 aa12.58□□□□□ -0.4
RNQ1YCL028W BCH2P36122 765 aa12.58□□□□□ -0.4
RNQ1YCL028W PAN5P38787 379 aa12.58□□□□□ -0.4
RNQ1YCL028W STT3P39007 718 aaKnown RBP12.58□□□□□ -0.4
RNQ1YCL028W SLK19Q08581 821 aaKnown RBP12.58□□□□□ -0.4
RNQ1YCL028W OXR1Q08952 273 aa12.58□□□□□ -0.4
RNQ1YCL028W SAM1P10659 382 aaKnown RBP12.57□□□□□ -0.4
RNQ1YCL028W ALG1P16661 449 aa12.57□□□□□ -0.4
RNQ1YCL028W CIT3P43635 486 aa12.57□□□□□ -0.4
RNQ1YCL028W ALD6P54115 500 aaKnown RBP12.57□□□□□ -0.4
RNQ1YCL028W JIP4Q03361 876 aa12.57□□□□□ -0.4
RNQ1YCL028W MMR1Q06324 491 aa12.57□□□□□ -0.4
RNQ1YCL028W TUF1P02992 437 aaKnown RBP12.56□□□□□ -0.4
RNQ1YCL028W MCM4P30665 933 aaKnown RBP12.56□□□□□ -0.4
RNQ1YCL028W TGL1P34163 548 aa12.56□□□□□ -0.4
RNQ1YCL028W SUL1P38359 859 aa12.56□□□□□ -0.4
RNQ1YCL028W YPT11P48559 417 aa12.56□□□□□ -0.4
RNQ1YCL028W SDA1P53313 767 aaKnown RBP12.56□□□□□ -0.4
RNQ1YCL028W YGR273CP53329 174 aa12.56□□□□□ -0.4
RNQ1YCL028W KRE33P53914 1056 aaKnown RBP12.56□□□□□ -0.4
RNQ1YCL028W VMS1Q04311 632 aaKnown RBP12.56□□□□□ -0.4
RNQ1YCL028W RBA50Q04418 439 aa12.56□□□□□ -0.4
RNQ1YCL028W TMA64Q04600 565 aaKnown RBP12.56□□□□□ -0.4
RNQ1YCL028W CFT2Q12102 859 aaPredicted RBP12.56□□□□□ -0.4
RNQ1YCL028W TRS33Q99394 268 aa12.56□□□□□ -0.4
RNQ1YCL028W GPA1P08539 472 aa12.55□□□□□ -0.4
RNQ1YCL028W VMA2P16140 517 aaKnown RBP12.55□□□□□ -0.4
RNQ1YCL028W MCM3P24279 971 aaKnown RBP12.55□□□□□ -0.4
RNQ1YCL028W SRO9P25567 434 aaKnown RBP12.55□□□□□ -0.4
RNQ1YCL028W YKT6P36015 200 aaKnown RBP12.55□□□□□ -0.4
RNQ1YCL028W YKR018CP36114 725 aa12.55□□□□□ -0.4
RNQ1YCL028W YER130CP39959 443 aa12.55□□□□□ -0.4
RNQ1YCL028W RRD1P40454 393 aaKnown RBP12.55□□□□□ -0.4
RNQ1YCL028W CUE3P53137 624 aaKnown RBP12.55□□□□□ -0.4
RNQ1YCL028W RKM4Q12504 494 aa12.55□□□□□ -0.4
RNQ1YCL028W ORC6P38826 435 aa12.54□□□□□ -0.4
RNQ1YCL028W ATG32P40458 529 aa12.54□□□□□ -0.4
RNQ1YCL028W SCY1P53009 804 aa12.54□□□□□ -0.4
RNQ1YCL028W LIF1P53150 421 aa12.54□□□□□ -0.4
RNQ1YCL028W AIM33Q04516 312 aa12.54□□□□□ -0.4
RNQ1YCL028W MYO1P08964 1928 aa12.54□□□□□ -0.4
RNQ1YCL028W PHR1P05066 565 aaKnown RBP RIP-Chip data12.53□□□□□ -0.4not detected
RNQ1YCL028W UGA4P32837 571 aa12.53□□□□□ -0.4
RNQ1YCL028W IXR1P33417 597 aa12.53□□□□□ -0.4
RNQ1YCL028W NPR3P38742 1146 aa12.53□□□□□ -0.4
RNQ1YCL028W CST9Q06032 482 aa12.53□□□□□ -0.4
RNQ1YCL028W SGD1Q06132 899 aa12.53□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 155.6 ms