RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W ALA1P40825 983 aaKnown RBP6.82□□□□□ -1.32
SHM1YBR263W JJJ2P46997 583 aa6.82□□□□□ -1.32
SHM1YBR263W YNL108CP53929 270 aa6.82□□□□□ -1.32
SHM1YBR263W SEC18P18759 758 aaKnown RBP6.81□□□□□ -1.32
SHM1YBR263W RPS9BP05755 195 aaKnown RBP6.8□□□□□ -1.32
SHM1YBR263W POM152P39685 1337 aa6.8□□□□□ -1.32
SHM1YBR263W LCB1P25045 558 aaKnown RBP6.79□□□□□ -1.32
SHM1YBR263W IRE1P32361 1115 aa6.79□□□□□ -1.32
SHM1YBR263W SHM1P37292 490 aaPredicted RBP6.79□□□□□ -1.32
SHM1YBR263W NMD2P38798 1089 aaKnown RBP6.79□□□□□ -1.32
SHM1YBR263W UBX2Q04228 584 aa6.79□□□□□ -1.32
SHM1YBR263W GAS5Q08193 484 aa6.79□□□□□ -1.32
SHM1YBR263W KTR3P38130 404 aaPredicted RBP6.79□□□□□ -1.32
SHM1YBR263W FPR3P38911 411 aaKnown RBP6.79□□□□□ -1.32
SHM1YBR263W NUG1P40010 520 aaKnown RBP6.79□□□□□ -1.32
SHM1YBR263W YNL193WP53870 558 aa6.79□□□□□ -1.32
SHM1YBR263W IRC4Q03036 179 aa6.79□□□□□ -1.32
SHM1YBR263W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
SHM1YBR263W GLO3P38682 493 aaKnown RBP6.78□□□□□ -1.32
SHM1YBR263W CCT8P47079 568 aaKnown RBP6.78□□□□□ -1.32
SHM1YBR263W YGL242CP53066 181 aa6.78□□□□□ -1.32
SHM1YBR263W RPN7Q06103 429 aaKnown RBP6.78□□□□□ -1.32
SHM1YBR263W TOS4Q06266 489 aa6.78□□□□□ -1.32
SHM1YBR263W NCB2Q92317 146 aa6.78□□□□□ -1.32
SHM1YBR263W SBE2P42223 864 aaKnown RBP6.77□□□□□ -1.33
SHM1YBR263W GSM1P42950 618 aa6.77□□□□□ -1.33
SHM1YBR263W RIM21P48565 533 aa6.77□□□□□ -1.33
SHM1YBR263W NOT3P06102 836 aaKnown RBP6.76□□□□□ -1.33
SHM1YBR263W RDS2P19541 446 aaKnown RBP6.76□□□□□ -1.33
SHM1YBR263W ALO1P54783 526 aaKnown RBP6.76□□□□□ -1.33
SHM1YBR263W PRP42Q03776 544 aaKnown RBP6.76□□□□□ -1.33
SHM1YBR263W HKR1P41809 1802 aa6.76□□□□□ -1.33
SHM1YBR263W FIG2P25653 1609 aa6.76□□□□□ -1.33
SHM1YBR263W MSM1P22438 575 aa6.75□□□□□ -1.33
SHM1YBR263W AFG2P32794 780 aa6.75□□□□□ -1.33
SHM1YBR263W ECM21P38167 1117 aaKnown RBP6.75□□□□□ -1.33
SHM1YBR263W RFC1P38630 861 aaKnown RBP6.75□□□□□ -1.33
SHM1YBR263W YPQ2Q06328 317 aa6.75□□□□□ -1.33
SHM1YBR263W RRG1Q12167 365 aaPredicted RBP6.75□□□□□ -1.33
SHM1YBR263W YPR053CQ6Q5F3 151 aa6.75□□□□□ -1.33
SHM1YBR263W FLO11P08640 1367 aa6.75□□□□□ -1.33
SHM1YBR263W FAS2P19097 1887 aaKnown RBP6.75□□□□□ -1.33
SHM1YBR263W YLR278CQ05854 1341 aa6.75□□□□□ -1.33
SHM1YBR263W THS1P04801 734 aaKnown RBP6.74□□□□□ -1.33
SHM1YBR263W SWI5P08153 709 aa6.74□□□□□ -1.33
SHM1YBR263W CDC16P09798 840 aa6.74□□□□□ -1.33
SHM1YBR263W RPT3P33298 428 aaKnown RBP6.74□□□□□ -1.33
SHM1YBR263W YIR042CP40586 236 aa6.74□□□□□ -1.33
SHM1YBR263W MLC1P53141 149 aa6.74□□□□□ -1.33
SHM1YBR263W TDA6Q06466 467 aa6.74□□□□□ -1.33
SHM1YBR263W WRS1Q12109 432 aaKnown RBP6.74□□□□□ -1.33
SHM1YBR263W RRI2Q12348 645 aa6.74□□□□□ -1.33
SHM1YBR263W PDR18P53756 1333 aa6.74□□□□□ -1.33
SHM1YBR263W RPS31P05759 152 aaKnown RBP6.73□□□□□ -1.33
SHM1YBR263W PIF1P07271 859 aa6.73□□□□□ -1.33
SHM1YBR263W FPS1P23900 669 aa6.73□□□□□ -1.33
SHM1YBR263W PDC6P26263 563 aaKnown RBP6.73□□□□□ -1.33
SHM1YBR263W MRPL16P38064 232 aa6.73□□□□□ -1.33
SHM1YBR263W YFH7P43591 353 aa6.73□□□□□ -1.33
SHM1YBR263W INM2Q05533 292 aa6.73□□□□□ -1.33
SHM1YBR263W NKP2Q06162 153 aa6.73□□□□□ -1.33
SHM1YBR263W PSF3Q12146 194 aa6.73□□□□□ -1.33
SHM1YBR263W DUR1,2P32528 1835 aaKnown RBP6.73□□□□□ -1.33
SHM1YBR263W GPM1P00950 247 aaKnown RBP6.73□□□□□ -1.33
SHM1YBR263W RTG2P32608 588 aaKnown RBP6.73□□□□□ -1.33
SHM1YBR263W STV1P37296 890 aa6.73□□□□□ -1.33
SHM1YBR263W FET4P40988 552 aa6.73□□□□□ -1.33
SHM1YBR263W YJL007CP47080 104 aa6.73□□□□□ -1.33
SHM1YBR263W VPS4P52917 437 aa6.73□□□□□ -1.33
SHM1YBR263W PIB2P53191 635 aa6.73□□□□□ -1.33
SHM1YBR263W TRM44Q02648 567 aaKnown RBP6.73□□□□□ -1.33
SHM1YBR263W RMD1Q03441 430 aa6.73□□□□□ -1.33
SHM1YBR263W RPS7AP26786 190 aaKnown RBP6.72□□□□□ -1.33
SHM1YBR263W AIM9P40053 627 aaKnown RBP6.72□□□□□ -1.33
SHM1YBR263W MRPS35P53292 345 aa6.72□□□□□ -1.33
SHM1YBR263W ECM16Q04217 1267 aaKnown RBP6.72□□□□□ -1.33
SHM1YBR263W CRF1Q04930 467 aa6.72□□□□□ -1.33
SHM1YBR263W TOM1Q03280 3268 aa6.71□□□□□ -1.33
SHM1YBR263W SNF3P10870 884 aa6.71□□□□□ -1.34
SHM1YBR263W PTK1P36002 662 aaPredicted RBP6.71□□□□□ -1.34
SHM1YBR263W SKN7P38889 622 aa6.71□□□□□ -1.34
SHM1YBR263W YGR117CP53270 476 aa6.71□□□□□ -1.34
SHM1YBR263W TIM50Q02776 476 aa6.71□□□□□ -1.34
SHM1YBR263W SSA4P22202 642 aaKnown RBP6.7□□□□□ -1.34
SHM1YBR263W GRX7P38068 203 aa6.7□□□□□ -1.34
SHM1YBR263W YMR187CQ03236 431 aa6.7□□□□□ -1.34
SHM1YBR263W ACK1Q07622 623 aaPredicted RBP6.7□□□□□ -1.34
SHM1YBR263W STB3Q12427 513 aa6.7□□□□□ -1.34
SHM1YBR263W HPR1P17629 752 aaKnown RBP6.69□□□□□ -1.34
SHM1YBR263W MTC3P53077 123 aa6.69□□□□□ -1.34
SHM1YBR263W YNR014WP53719 212 aa6.69□□□□□ -1.34
SHM1YBR263W MRX10Q05648 414 aa6.69□□□□□ -1.34
SHM1YBR263W BRE1Q07457 700 aaKnown RBP6.69□□□□□ -1.34
SHM1YBR263W RAD50P12753 1312 aa6.69□□□□□ -1.34
SHM1YBR263W CYB2P00175 591 aa6.68□□□□□ -1.34
SHM1YBR263W RPS6AP0CX37 236 aaKnown RBP6.68□□□□□ -1.34
SHM1YBR263W RPS6BP0CX38 236 aaPredicted RBP6.68□□□□□ -1.34
SHM1YBR263W PBY1P38254 753 aa6.68□□□□□ -1.34
SHM1YBR263W MCX1P38323 520 aaPredicted RBP6.68□□□□□ -1.34
SHM1YBR263W YMR147WP40218 223 aaKnown RBP6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms