RNA–Protein interactions for RNA: YBR254C

TRS20, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS20, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS20YBR254C OXR1Q08952 273 aa5.63□□□□□ -1.51
TRS20YBR254C VMA4P22203 233 aaKnown RBP5.62□□□□□ -1.51
TRS20YBR254C RET1P22276 1149 aaKnown RBP5.62□□□□□ -1.51
TRS20YBR254C FAA3P39002 694 aa5.62□□□□□ -1.51
TRS20YBR254C ECL1P48235 211 aa5.62□□□□□ -1.51
TRS20YBR254C YNR063WP53749 607 aa5.62□□□□□ -1.51
TRS20YBR254C YLR257WQ06146 321 aaKnown RBP5.62□□□□□ -1.51
TRS20YBR254C HEM13P11353 328 aaKnown RBP5.61□□□□□ -1.51
TRS20YBR254C RPT1P33299 467 aaKnown RBP5.61□□□□□ -1.51
TRS20YBR254C YPL109CQ02981 657 aa5.61□□□□□ -1.51
TRS20YBR254C LPX1Q12405 387 aaKnown RBP5.61□□□□□ -1.51
TRS20YBR254C SEC20P28791 383 aa5.6□□□□□ -1.51
TRS20YBR254C RDH54P38086 958 aa5.6□□□□□ -1.51
TRS20YBR254C PTC7P38797 343 aa5.6□□□□□ -1.51
TRS20YBR254C YGL140CP53120 1219 aa5.6□□□□□ -1.51
TRS20YBR254C SEN54Q02825 467 aaPredicted RBP5.6□□□□□ -1.51
TRS20YBR254C ADI1Q03677 179 aa5.6□□□□□ -1.51
TRS20YBR254C TAF7Q05021 590 aa5.6□□□□□ -1.51
TRS20YBR254C HXK1P04806 485 aaKnown RBP5.59□□□□□ -1.51
TRS20YBR254C GTS1P40956 396 aa5.59□□□□□ -1.51
TRS20YBR254C ORC3P54790 616 aa5.59□□□□□ -1.51
TRS20YBR254C RSA3Q05942 220 aaKnown RBP5.59□□□□□ -1.51
TRS20YBR254C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
TRS20YBR254C GAS1P22146 559 aaKnown RBP5.58□□□□□ -1.52
TRS20YBR254C ATG14P38270 344 aa5.58□□□□□ -1.52
TRS20YBR254C UBP5P39944 805 aa5.58□□□□□ -1.52
TRS20YBR254C PIC2P40035 300 aa5.58□□□□□ -1.52
TRS20YBR254C LAP2Q10740 671 aa5.58□□□□□ -1.52
TRS20YBR254C SAM35P14693 329 aa5.57□□□□□ -1.52
TRS20YBR254C HSE1P38753 452 aa5.57□□□□□ -1.52
TRS20YBR254C TSA1P34760 196 aaKnown RBP5.56□□□□□ -1.52
TRS20YBR254C ADD66P36040 267 aa5.56□□□□□ -1.52
TRS20YBR254C QNS1P38795 714 aaKnown RBP5.56□□□□□ -1.52
TRS20YBR254C NIT1P40447 199 aa5.56□□□□□ -1.52
TRS20YBR254C SEC23P15303 768 aaKnown RBP5.55□□□□□ -1.52
TRS20YBR254C YHL012WP38709 493 aa5.55□□□□□ -1.52
TRS20YBR254C YJL045WP47052 634 aa5.55□□□□□ -1.52
TRS20YBR254C CDA2Q06703 312 aa5.55□□□□□ -1.52
TRS20YBR254C AFG2P32794 780 aa5.54□□□□□ -1.52
TRS20YBR254C RKM2Q03942 479 aa5.54□□□□□ -1.52
TRS20YBR254C EST2Q06163 884 aa5.54□□□□□ -1.52
TRS20YBR254C HRK1Q08732 759 aaKnown RBP5.54□□□□□ -1.52
TRS20YBR254C PRP43P53131 767 aaKnown RBP5.53□□□□□ -1.52
TRS20YBR254C YDL177CQ12257 170 aa5.53□□□□□ -1.52
TRS20YBR254C DED1P06634 604 aaKnown RBP5.52□□□□□ -1.53
TRS20YBR254C YGR122WP53272 402 aa5.52□□□□□ -1.53
TRS20YBR254C MDL2P33311 773 aa5.51□□□□□ -1.53
TRS20YBR254C SLD2P34252 453 aa5.51□□□□□ -1.53
TRS20YBR254C VPS53P47061 822 aa5.51□□□□□ -1.53
TRS20YBR254C PRE9P23638 258 aaKnown RBP5.5□□□□□ -1.53
TRS20YBR254C KIP1P28742 1111 aa5.5□□□□□ -1.53
TRS20YBR254C YSC84P32793 468 aa5.5□□□□□ -1.53
TRS20YBR254C ETP1P38748 585 aaKnown RBP5.5□□□□□ -1.53
TRS20YBR254C MRPS18P42847 217 aa5.5□□□□□ -1.53
TRS20YBR254C HDA2Q06629 674 aa5.5□□□□□ -1.53
TRS20YBR254C RAD2P07276 1031 aa5.49□□□□□ -1.53
TRS20YBR254C ATE1P16639 503 aa5.49□□□□□ -1.53
TRS20YBR254C SRO9P25567 434 aaKnown RBP5.49□□□□□ -1.53
TRS20YBR254C AIM26P32858 118 aa5.49□□□□□ -1.53
TRS20YBR254C GPB2P39717 880 aa5.49□□□□□ -1.53
TRS20YBR254C RPS26AP39938 119 aaKnown RBP5.49□□□□□ -1.53
TRS20YBR254C RPS26BP39939 119 aaKnown RBP5.49□□□□□ -1.53
TRS20YBR254C POL32P47110 350 aa5.49□□□□□ -1.53
TRS20YBR254C RCL1Q08096 367 aaPredicted RBP5.49□□□□□ -1.53
TRS20YBR254C MCD1Q12158 566 aa5.49□□□□□ -1.53
TRS20YBR254C PTC5Q12511 572 aa5.49□□□□□ -1.53
TRS20YBR254C CYC8P14922 966 aa5.48□□□□□ -1.53
TRS20YBR254C MCM2P29469 868 aa5.48□□□□□ -1.53
TRS20YBR254C THI80P35202 319 aa5.48□□□□□ -1.53
TRS20YBR254C ALG3P38179 458 aa5.48□□□□□ -1.53
TRS20YBR254C MRPL22P53881 309 aa5.48□□□□□ -1.53
TRS20YBR254C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
TRS20YBR254C ROD1Q02805 837 aa5.47□□□□□ -1.53
TRS20YBR254C YML020WQ03722 664 aa5.47□□□□□ -1.53
TRS20YBR254C RSC58Q07979 502 aa5.47□□□□□ -1.53
TRS20YBR254C AIM3P38266 947 aaKnown RBP5.46□□□□□ -1.54
TRS20YBR254C MGE1P38523 228 aa5.46□□□□□ -1.54
TRS20YBR254C FOL2P51601 243 aaKnown RBP5.46□□□□□ -1.54
TRS20YBR254C RAT1Q02792 1006 aaKnown RBP5.46□□□□□ -1.54
TRS20YBR254C SPR28Q04921 423 aa5.46□□□□□ -1.54
TRS20YBR254C TAF13P11747 167 aa5.45□□□□□ -1.54
TRS20YBR254C PRP6P19735 899 aaPredicted RBP5.45□□□□□ -1.54
TRS20YBR254C MKK2P32491 506 aa5.45□□□□□ -1.54
TRS20YBR254C SEC8P32855 1065 aa5.44□□□□□ -1.54
TRS20YBR254C HXT13P39924 564 aa5.44□□□□□ -1.54
TRS20YBR254C FYV10P40492 516 aa5.44□□□□□ -1.54
TRS20YBR254C GNP1P48813 663 aa5.44□□□□□ -1.54
TRS20YBR254C HXT17P53631 564 aa5.44□□□□□ -1.54
TRS20YBR254C SIW14P53965 281 aa5.44□□□□□ -1.54
TRS20YBR254C HXT15P54854 567 aa5.44□□□□□ -1.54
TRS20YBR254C HOS3Q02959 697 aaKnown RBP5.44□□□□□ -1.54
TRS20YBR254C RRP15Q06511 250 aaPredicted RBP5.44□□□□□ -1.54
TRS20YBR254C ESC8Q08119 714 aa5.44□□□□□ -1.54
TRS20YBR254C NBA1Q08229 501 aaKnown RBP5.44□□□□□ -1.54
TRS20YBR254C COQ4O13525 335 aa5.43□□□□□ -1.54
TRS20YBR254C GCR1P07261 785 aa5.43□□□□□ -1.54
TRS20YBR254C SPS1P08458 490 aa5.43□□□□□ -1.54
TRS20YBR254C BAP2P38084 609 aa5.43□□□□□ -1.54
TRS20YBR254C TAF1P46677 1066 aa5.43□□□□□ -1.54
TRS20YBR254C YJR107WP47145 328 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 103.6 ms