RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C THI6P41835 540 aa5.45□□□□□ -1.54
ROT2YBR229C RPS6AP0CX37 236 aaKnown RBP5.44□□□□□ -1.54
ROT2YBR229C RPS6BP0CX38 236 aaPredicted RBP5.44□□□□□ -1.54
ROT2YBR229C BDF1P35817 686 aa5.44□□□□□ -1.54
ROT2YBR229C EFM4P40516 257 aa5.44□□□□□ -1.54
ROT2YBR229C PIP2P52960 996 aa5.44□□□□□ -1.54
ROT2YBR229C LSC2P53312 427 aa5.44□□□□□ -1.54
ROT2YBR229C VAC14Q06708 880 aa5.44□□□□□ -1.54
ROT2YBR229C PSR2Q07949 397 aa5.44□□□□□ -1.54
ROT2YBR229C YOL098CQ12496 1037 aa5.44□□□□□ -1.54
ROT2YBR229C DEP1P31385 405 aa5.44□□□□□ -1.54
ROT2YBR229C FRD1P32614 470 aaKnown RBP5.44□□□□□ -1.54
ROT2YBR229C MDL2P33311 773 aa5.44□□□□□ -1.54
ROT2YBR229C TOM71P38825 639 aaKnown RBP5.44□□□□□ -1.54
ROT2YBR229C VID27P40157 782 aa5.44□□□□□ -1.54
ROT2YBR229C SHQ1P40486 507 aaPredicted RBP5.44□□□□□ -1.54
ROT2YBR229C HFM1P51979 1187 aa5.44□□□□□ -1.54
ROT2YBR229C RPT6Q01939 405 aaKnown RBP5.44□□□□□ -1.54
ROT2YBR229C SPP382Q06411 708 aaPredicted RBP5.44□□□□□ -1.54
ROT2YBR229C YPL260WQ08977 551 aa5.44□□□□□ -1.54
ROT2YBR229C MYO1P08964 1928 aa5.44□□□□□ -1.54
ROT2YBR229C FOB1O13329 566 aa5.43□□□□□ -1.54
ROT2YBR229C SPB4P25808 606 aaPredicted RBP5.43□□□□□ -1.54
ROT2YBR229C PRO3P32263 286 aaKnown RBP5.43□□□□□ -1.54
ROT2YBR229C MUD2P36084 527 aaKnown RBP5.43□□□□□ -1.54
ROT2YBR229C VPS41P38959 992 aa5.43□□□□□ -1.54
ROT2YBR229C STT3P39007 718 aaKnown RBP5.43□□□□□ -1.54
ROT2YBR229C ATG3P40344 310 aa5.43□□□□□ -1.54
ROT2YBR229C VTC2P43585 828 aa5.43□□□□□ -1.54
ROT2YBR229C YGR153WP48238 217 aa5.43□□□□□ -1.54
ROT2YBR229C CLF1Q12309 687 aaPredicted RBP5.43□□□□□ -1.54
ROT2YBR229C OSH2Q12451 1283 aa5.43□□□□□ -1.54
ROT2YBR229C CIT1P00890 479 aa5.43□□□□□ -1.54
ROT2YBR229C THR4P16120 514 aaKnown RBP5.43□□□□□ -1.54
ROT2YBR229C MAK11P20484 414 aaKnown RBP5.43□□□□□ -1.54
ROT2YBR229C SIT4P20604 311 aa5.43□□□□□ -1.54
ROT2YBR229C VFA1P40080 203 aa5.43□□□□□ -1.54
ROT2YBR229C RET3P53600 189 aa5.43□□□□□ -1.54
ROT2YBR229C UTP5Q04177 643 aaKnown RBP5.43□□□□□ -1.54
ROT2YBR229C GIS4Q04233 774 aa5.43□□□□□ -1.54
ROT2YBR229C YLR287CQ05881 355 aa5.43□□□□□ -1.54
ROT2YBR229C ATG23Q06671 453 aa5.43□□□□□ -1.54
ROT2YBR229C RRP6Q12149 733 aaKnown RBP5.43□□□□□ -1.54
ROT2YBR229C MTF2P10849 440 aa5.42□□□□□ -1.54
ROT2YBR229C BYE1P36106 594 aa5.42□□□□□ -1.54
ROT2YBR229C TOS1P38288 455 aa5.42□□□□□ -1.54
ROT2YBR229C ERG7P38604 731 aa5.42□□□□□ -1.54
ROT2YBR229C CCT3P39077 534 aaKnown RBP5.42□□□□□ -1.54
ROT2YBR229C RNT1Q02555 471 aa5.42□□□□□ -1.54
ROT2YBR229C STI1P15705 589 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
ROT2YBR229C SPO12P17123 173 aa5.42□□□□□ -1.54
ROT2YBR229C PSO2P30620 661 aa5.42□□□□□ -1.54
ROT2YBR229C JJJ2P46997 583 aa5.42□□□□□ -1.54
ROT2YBR229C UBA2P52488 636 aa5.42□□□□□ -1.54
ROT2YBR229C SAS4Q04003 481 aa5.42□□□□□ -1.54
ROT2YBR229C GYL1Q04322 720 aa5.42□□□□□ -1.54
ROT2YBR229C DSE3Q08729 430 aa5.42□□□□□ -1.54
ROT2YBR229C WRS1Q12109 432 aaKnown RBP5.42□□□□□ -1.54
ROT2YBR229C SRP54P20424 541 aaKnown RBP5.41□□□□□ -1.54
ROT2YBR229C CLB1P24868 471 aa5.41□□□□□ -1.54
ROT2YBR229C RAD57P25301 460 aa5.41□□□□□ -1.54
ROT2YBR229C SRB4P32569 687 aa5.41□□□□□ -1.54
ROT2YBR229C NFU1P32860 256 aa5.41□□□□□ -1.54
ROT2YBR229C TIF4632P39936 914 aaKnown RBP5.41□□□□□ -1.54
ROT2YBR229C CTK3P46963 296 aaPredicted RBP5.41□□□□□ -1.54
ROT2YBR229C VTC3Q02725 835 aa5.41□□□□□ -1.54
ROT2YBR229C TRS120Q04183 1289 aa5.41□□□□□ -1.54
ROT2YBR229C RIX7Q07844 837 aaKnown RBP5.41□□□□□ -1.54
ROT2YBR229C YAP7Q08182 245 aa5.41□□□□□ -1.54
ROT2YBR229C CKI1P20485 582 aa5.41□□□□□ -1.54
ROT2YBR229C RPL8BP29453 256 aaKnown RBP5.41□□□□□ -1.54
ROT2YBR229C CNS1P33313 385 aa5.41□□□□□ -1.54
ROT2YBR229C RPG1P38249 964 aaKnown RBP5.41□□□□□ -1.54
ROT2YBR229C HUL4P40985 892 aa5.41□□□□□ -1.54
ROT2YBR229C NGL3Q03210 505 aa5.41□□□□□ -1.54
ROT2YBR229C IRC3Q06683 689 aa5.41□□□□□ -1.54
ROT2YBR229C YOL087CQ99247 1116 aa5.41□□□□□ -1.54
ROT2YBR229C HXT1P32465 570 aa5.41□□□□□ -1.54
ROT2YBR229C PES4P39684 611 aa5.41□□□□□ -1.54
ROT2YBR229C YAP5P40574 245 aa5.41□□□□□ -1.54
ROT2YBR229C APL6P46682 809 aa5.41□□□□□ -1.54
ROT2YBR229C MDM1Q01846 1127 aa5.41□□□□□ -1.54
ROT2YBR229C NOP6Q07623 225 aaKnown RBP5.41□□□□□ -1.54
ROT2YBR229C SLK19Q08581 821 aaKnown RBP5.41□□□□□ -1.54
ROT2YBR229C PLP2Q12017 286 aa5.41□□□□□ -1.54
ROT2YBR229C RMP1Q12530 201 aa5.41□□□□□ -1.54
ROT2YBR229C PPR1P07272 904 aaPredicted RBP5.4□□□□□ -1.54
ROT2YBR229C MIP1P15801 1254 aa5.4□□□□□ -1.54
ROT2YBR229C CKA2P19454 339 aa5.4□□□□□ -1.54
ROT2YBR229C UBP1P25037 809 aa5.4□□□□□ -1.54
ROT2YBR229C CLB5P30283 435 aa5.4□□□□□ -1.54
ROT2YBR229C SMF1P38925 575 aa5.4□□□□□ -1.54
ROT2YBR229C VPS8P39702 1274 aa5.4□□□□□ -1.54
ROT2YBR229C YGL140CP53120 1219 aa5.4□□□□□ -1.54
ROT2YBR229C NSG2P53898 299 aa5.4□□□□□ -1.54
ROT2YBR229C UME1Q03010 460 aa5.4□□□□□ -1.54
ROT2YBR229C YOL075CQ08234 1294 aa5.4□□□□□ -1.54
ROT2YBR229C NUR1Q12066 484 aa5.4□□□□□ -1.54
ROT2YBR229C UGA2P38067 497 aa5.4□□□□□ -1.55
ROT2YBR229C YMR074CQ04773 145 aa5.4□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms