RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C GIN4Q12263 1142 aa7.66□□□□□ -1.18
TDP1YBR223C RPS6AP0CX37 236 aaKnown RBP7.65□□□□□ -1.18
TDP1YBR223C RPS6BP0CX38 236 aaPredicted RBP7.65□□□□□ -1.18
TDP1YBR223C MAK11P20484 414 aaKnown RBP7.65□□□□□ -1.18
TDP1YBR223C PSO2P30620 661 aa7.65□□□□□ -1.18
TDP1YBR223C SAS3P34218 831 aa7.65□□□□□ -1.18
TDP1YBR223C PXL1P36166 706 aa7.65□□□□□ -1.18
TDP1YBR223C TOM71P38825 639 aaKnown RBP7.65□□□□□ -1.18
TDP1YBR223C STT3P39007 718 aaKnown RBP7.65□□□□□ -1.18
TDP1YBR223C GSM1P42950 618 aa7.65□□□□□ -1.18
TDP1YBR223C PUS6P53294 404 aa7.65□□□□□ -1.18
TDP1YBR223C YLR287CQ05881 355 aa7.65□□□□□ -1.18
TDP1YBR223C SMD2Q06217 110 aaKnown RBP7.65□□□□□ -1.18
TDP1YBR223C TLG2Q08144 397 aa7.65□□□□□ -1.18
TDP1YBR223C KEL3Q08979 651 aaPredicted RBP7.65□□□□□ -1.18
TDP1YBR223C RRP6Q12149 733 aaKnown RBP7.65□□□□□ -1.18
TDP1YBR223C NOP14Q99207 810 aaKnown RBP7.65□□□□□ -1.18
TDP1YBR223C FLO1P32768 1537 aa7.65□□□□□ -1.18
TDP1YBR223C TUF1P02992 437 aaKnown RBP7.64□□□□□ -1.19
TDP1YBR223C STE11P23561 717 aa7.64□□□□□ -1.19
TDP1YBR223C SPB4P25808 606 aaPredicted RBP7.64□□□□□ -1.19
TDP1YBR223C SHM1P37292 490 aaPredicted RBP7.64□□□□□ -1.19
TDP1YBR223C SDA1P53313 767 aaKnown RBP7.64□□□□□ -1.19
TDP1YBR223C NSG2P53898 299 aa7.64□□□□□ -1.19
TDP1YBR223C HMI1Q12039 706 aa7.64□□□□□ -1.19
TDP1YBR223C CLF1Q12309 687 aaPredicted RBP7.64□□□□□ -1.19
TDP1YBR223C PRI1P10363 409 aa7.63□□□□□ -1.19
TDP1YBR223C ACE2P21192 770 aa7.63□□□□□ -1.19
TDP1YBR223C SPO11P23179 398 aa7.63□□□□□ -1.19
TDP1YBR223C DPB3P27344 201 aa7.63□□□□□ -1.19
TDP1YBR223C SMY1P32364 656 aaKnown RBP7.63□□□□□ -1.19
TDP1YBR223C MIP6P38760 659 aaKnown RBP7.63□□□□□ -1.19
TDP1YBR223C UBA2P52488 636 aa7.63□□□□□ -1.19
TDP1YBR223C ERO1Q03103 563 aa7.63□□□□□ -1.19
TDP1YBR223C PRP42Q03776 544 aaKnown RBP7.63□□□□□ -1.19
TDP1YBR223C RRB1Q04225 511 aaKnown RBP7.63□□□□□ -1.19
TDP1YBR223C SLK19Q08581 821 aaKnown RBP7.63□□□□□ -1.19
TDP1YBR223C DSE3Q08729 430 aa7.63□□□□□ -1.19
TDP1YBR223C HKR1P41809 1802 aa7.63□□□□□ -1.19
TDP1YBR223C ARG82P07250 355 aa7.63□□□□□ -1.19
TDP1YBR223C RET1P22276 1149 aaKnown RBP7.63□□□□□ -1.19
TDP1YBR223C YEL043WP32618 956 aa7.63□□□□□ -1.19
TDP1YBR223C RRP1P35178 278 aaPredicted RBP7.63□□□□□ -1.19
TDP1YBR223C CCT3P39077 534 aaKnown RBP7.63□□□□□ -1.19
TDP1YBR223C ATG3P40344 310 aa7.63□□□□□ -1.19
TDP1YBR223C VTC2P43585 828 aa7.63□□□□□ -1.19
TDP1YBR223C AIP1P46680 615 aaKnown RBP7.63□□□□□ -1.19
TDP1YBR223C ERG5P54781 538 aa7.63□□□□□ -1.19
TDP1YBR223C VPS30Q02948 557 aa7.63□□□□□ -1.19
TDP1YBR223C UTP5Q04177 643 aaKnown RBP7.63□□□□□ -1.19
TDP1YBR223C SML1Q04964 104 aa7.63□□□□□ -1.19
TDP1YBR223C UTP13Q05946 817 aaKnown RBP7.63□□□□□ -1.19
TDP1YBR223C MTF2P10849 440 aa7.62□□□□□ -1.19
TDP1YBR223C SEC23P15303 768 aaKnown RBP7.62□□□□□ -1.19
TDP1YBR223C TIF4632P39936 914 aaKnown RBP7.62□□□□□ -1.19
TDP1YBR223C SET4P42948 560 aa7.62□□□□□ -1.19
TDP1YBR223C YGR153WP48238 217 aa7.62□□□□□ -1.19
TDP1YBR223C MAL13P53338 473 aa7.62□□□□□ -1.19
TDP1YBR223C RET3P53600 189 aa7.62□□□□□ -1.19
TDP1YBR223C FOL1P53848 824 aa7.62□□□□□ -1.19
TDP1YBR223C BNI5P53890 448 aaKnown RBP7.62□□□□□ -1.19
TDP1YBR223C MDM1Q01846 1127 aa7.62□□□□□ -1.19
TDP1YBR223C CSM3Q04659 317 aa7.62□□□□□ -1.19
TDP1YBR223C OM45P16547 393 aa7.61□□□□□ -1.19
TDP1YBR223C SRP54P20424 541 aaKnown RBP7.61□□□□□ -1.19
TDP1YBR223C MCX1P38323 520 aaPredicted RBP7.61□□□□□ -1.19
TDP1YBR223C ERG7P38604 731 aa7.61□□□□□ -1.19
TDP1YBR223C CCT4P39078 528 aaKnown RBP7.61□□□□□ -1.19
TDP1YBR223C DSE4P53753 1117 aa7.61□□□□□ -1.19
TDP1YBR223C YAP7Q08182 245 aa7.61□□□□□ -1.19
TDP1YBR223C YKL068W-AQ3E826 78 aa7.61□□□□□ -1.19
TDP1YBR223C SPO12P17123 173 aa7.6□□□□□ -1.19
TDP1YBR223C GLN1P32288 370 aaKnown RBP7.6□□□□□ -1.19
TDP1YBR223C YKL091CP33324 310 aaKnown RBP7.6□□□□□ -1.19
TDP1YBR223C RPC25P35718 212 aa7.6□□□□□ -1.19
TDP1YBR223C PET10P36139 283 aa7.6□□□□□ -1.19
TDP1YBR223C CCC2P38995 1004 aa7.6□□□□□ -1.19
TDP1YBR223C RAD26P40352 1085 aa7.6□□□□□ -1.19
TDP1YBR223C SHQ1P40486 507 aaPredicted RBP7.6□□□□□ -1.19
TDP1YBR223C YAP5P40574 245 aa7.6□□□□□ -1.19
TDP1YBR223C UME1Q03010 460 aa7.6□□□□□ -1.19
TDP1YBR223C VAC14Q06708 880 aa7.6□□□□□ -1.19
TDP1YBR223C ACK1Q07622 623 aaPredicted RBP7.6□□□□□ -1.19
TDP1YBR223C YOL075CQ08234 1294 aa7.6□□□□□ -1.19
TDP1YBR223C GRX6Q12438 231 aa7.6□□□□□ -1.19
TDP1YBR223C FOB1O13329 566 aa7.6□□□□□ -1.19
TDP1YBR223C NUC1P08466 329 aa7.6□□□□□ -1.19
TDP1YBR223C SRM1P21827 482 aa7.6□□□□□ -1.19
TDP1YBR223C RPS7AP26786 190 aaKnown RBP7.6□□□□□ -1.19
TDP1YBR223C VFA1P40080 203 aa7.6□□□□□ -1.19
TDP1YBR223C THI6P41835 540 aa7.6□□□□□ -1.19
TDP1YBR223C HFM1P51979 1187 aa7.6□□□□□ -1.19
TDP1YBR223C ATG23Q06671 453 aa7.6□□□□□ -1.19
TDP1YBR223C SPO75Q07798 868 aa7.6□□□□□ -1.19
TDP1YBR223C RPO26P20435 155 aa7.59□□□□□ -1.19
TDP1YBR223C PRE8P23639 250 aa7.59□□□□□ -1.19
TDP1YBR223C SRB4P32569 687 aa7.59□□□□□ -1.19
TDP1YBR223C PES4P39684 611 aa7.59□□□□□ -1.19
TDP1YBR223C BUD16P39988 312 aa7.59□□□□□ -1.19
TDP1YBR223C ATG32P40458 529 aa7.59□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms