RNA–Protein interactions for RNA: YBR152W

SPP381, Transcript of mRNA splicing factor, component of U4/U6.U5 tri-snRNP, yeast

Gene SPP381, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPP381	YBR152W	SKN7	P38889	622 aa		5.78	□□□□□ -1.48
SPP381	YBR152W	YGR045C	P53229	120 aa		5.78	□□□□□ -1.48
SPP381	YBR152W	ALD6	P54115	500 aa	Known RBP	5.78	□□□□□ -1.48
SPP381	YBR152W	GDE1	Q02979	1223 aa		5.78	□□□□□ -1.48
SPP381	YBR152W	PUS1	Q12211	544 aa	Known RBP	5.78	□□□□□ -1.48
SPP381	YBR152W	YDR215C	Q12240	137 aa		5.78	□□□□□ -1.48
SPP381	YBR152W	LYP1	P32487	611 aa		5.77	□□□□□ -1.49
SPP381	YBR152W	MKK2	P32491	506 aa		5.77	□□□□□ -1.49
SPP381	YBR152W	SMY2	P32909	740 aa	Known RBP	5.77	□□□□□ -1.49
SPP381	YBR152W	TAT1	P38085	619 aa		5.77	□□□□□ -1.49
SPP381	YBR152W	VAC8	P39968	578 aa		5.77	□□□□□ -1.49
SPP381	YBR152W	SPO20	Q04359	397 aa		5.77	□□□□□ -1.49
SPP381	YBR152W	WRS1	Q12109	432 aa	Known RBP	5.77	□□□□□ -1.49
SPP381	YBR152W	REC8	Q12188	680 aa		5.77	□□□□□ -1.49
SPP381	YBR152W	SYP1	P25623	870 aa	Known RBP	5.76	□□□□□ -1.49
SPP381	YBR152W	MDJ1	P35191	511 aa		5.76	□□□□□ -1.49
SPP381	YBR152W	RER2	P35196	286 aa		5.76	□□□□□ -1.49
SPP381	YBR152W	CNN1	P43618	361 aa		5.76	□□□□□ -1.49
SPP381	YBR152W	ROD1	Q02805	837 aa		5.76	□□□□□ -1.49
SPP381	YBR152W	GIC2	Q06648	383 aa		5.76	□□□□□ -1.49
SPP381	YBR152W	HRK1	Q08732	759 aa	Known RBP	5.76	□□□□□ -1.49
SPP381	YBR152W	DBP5	P20449	482 aa	Known RBP	5.75	□□□□□ -1.49
SPP381	YBR152W	RGD1	P38339	666 aa		5.75	□□□□□ -1.49
SPP381	YBR152W	SPO74	P45819	413 aa		5.75	□□□□□ -1.49
SPP381	YBR152W	FAA4	P47912	694 aa	Known RBP	5.75	□□□□□ -1.49
SPP381	YBR152W	TYW3	P53177	273 aa		5.75	□□□□□ -1.49
SPP381	YBR152W	EEB1	Q02891	456 aa		5.75	□□□□□ -1.49
SPP381	YBR152W	YOR059C	Q08448	450 aa	Known RBP	5.75	□□□□□ -1.49
SPP381	YBR152W	YPL260W	Q08977	551 aa		5.75	□□□□□ -1.49
SPP381	YBR152W	ALG6	Q12001	544 aa	Known RBP	5.75	□□□□□ -1.49
SPP381	YBR152W	TRP2	P00899	507 aa	Known RBP	5.74	□□□□□ -1.49
SPP381	YBR152W	YCK2	P23292	546 aa	Known RBP	5.74	□□□□□ -1.49
SPP381	YBR152W	GPT2	P36148	743 aa		5.74	□□□□□ -1.49
SPP381	YBR152W	MSH4	P40965	878 aa	Predicted RBP	5.74	□□□□□ -1.49
SPP381	YBR152W	HNT2	P49775	206 aa		5.74	□□□□□ -1.49
SPP381	YBR152W	ALT1	P52893	592 aa		5.74	□□□□□ -1.49
SPP381	YBR152W	ELA1	P53861	379 aa	Predicted RBP	5.74	□□□□□ -1.49
SPP381	YBR152W	RKM4	Q12504	494 aa		5.74	□□□□□ -1.49
SPP381	YBR152W	PTC5	Q12511	572 aa		5.74	□□□□□ -1.49
SPP381	YBR152W	RET1	P22276	1149 aa	Known RBP	5.73	□□□□□ -1.49
SPP381	YBR152W	NFS1	P25374	497 aa		5.73	□□□□□ -1.49
SPP381	YBR152W	AGP1	P25376	633 aa		5.73	□□□□□ -1.49
SPP381	YBR152W	SBA1	P28707	216 aa	Known RBP	5.73	□□□□□ -1.49
SPP381	YBR152W	QNS1	P38795	714 aa	Known RBP	5.73	□□□□□ -1.49
SPP381	YBR152W	PRY1	P47032	299 aa		5.73	□□□□□ -1.49
SPP381	YBR152W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
SPP381	YBR152W	RSA3	Q05942	220 aa	Known RBP	5.73	□□□□□ -1.49
SPP381	YBR152W	GAS5	Q08193	484 aa		5.73	□□□□□ -1.49
SPP381	YBR152W	OPI10	Q08202	246 aa		5.73	□□□□□ -1.49
SPP381	YBR152W	SSF2	Q12153	453 aa	Predicted RBP	5.73	□□□□□ -1.49
SPP381	YBR152W	AFG2	P32794	780 aa		5.72	□□□□□ -1.49
SPP381	YBR152W	PGM1	P33401	570 aa	Known RBP	5.72	□□□□□ -1.49
SPP381	YBR152W	ALG3	P38179	458 aa		5.72	□□□□□ -1.49
SPP381	YBR152W	SAF1	P38352	637 aa		5.72	□□□□□ -1.49
SPP381	YBR152W	OCA5	P38738	679 aa		5.72	□□□□□ -1.49
SPP381	YBR152W	SHE9	Q04172	456 aa		5.72	□□□□□ -1.49
SPP381	YBR152W	DED1	P06634	604 aa	Known RBP	5.71	□□□□□ -1.5
SPP381	YBR152W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
SPP381	YBR152W	RPN3	P40016	523 aa	Known RBP	5.71	□□□□□ -1.5
SPP381	YBR152W	YNR063W	P53749	607 aa		5.71	□□□□□ -1.5
SPP381	YBR152W	TIF35	Q04067	274 aa	Known RBP	5.71	□□□□□ -1.5
SPP381	YBR152W	YLR257W	Q06146	321 aa	Known RBP	5.71	□□□□□ -1.5
SPP381	YBR152W	FAL1	Q12099	399 aa	Known RBP	5.71	□□□□□ -1.5
SPP381	YBR152W	RPS4A	P0CX35	261 aa	Known RBP	5.7	□□□□□ -1.5
SPP381	YBR152W	RPS4B	P0CX36	261 aa	Known RBP	5.7	□□□□□ -1.5
SPP381	YBR152W	MSB1	P21339	1137 aa	Known RBP	5.7	□□□□□ -1.5
SPP381	YBR152W	COQ2	P32378	372 aa		5.7	□□□□□ -1.5
SPP381	YBR152W	SLN1	P39928	1220 aa	Predicted RBP	5.7	□□□□□ -1.5
SPP381	YBR152W	MPH1	P40562	993 aa		5.7	□□□□□ -1.5
SPP381	YBR152W	MMM1	P41800	426 aa		5.7	□□□□□ -1.5
SPP381	YBR152W	RAT1	Q02792	1006 aa	Known RBP	5.7	□□□□□ -1.5
SPP381	YBR152W	YPL034W	Q03083	165 aa		5.7	□□□□□ -1.5
SPP381	YBR152W	GNT1	Q12096	491 aa		5.7	□□□□□ -1.5
SPP381	YBR152W	MRP8	P35719	219 aa		5.69	□□□□□ -1.5
SPP381	YBR152W	SPF1	P39986	1215 aa	Known RBP	5.69	□□□□□ -1.5
SPP381	YBR152W	CIT3	P43635	486 aa		5.69	□□□□□ -1.5
SPP381	YBR152W	TDA5	Q06417	326 aa	Known RBP	5.68	□□□□□ -1.5
SPP381	YBR152W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
SPP381	YBR152W	PUS7	Q08647	676 aa	Known RBP	5.68	□□□□□ -1.5
SPP381	YBR152W	NSI1	Q12457	570 aa		5.68	□□□□□ -1.5
SPP381	YBR152W	INO1	P11986	533 aa		5.67	□□□□□ -1.5
SPP381	YBR152W	CHS2	P14180	963 aa		5.67	□□□□□ -1.5
SPP381	YBR152W	KIP1	P28742	1111 aa		5.67	□□□□□ -1.5
SPP381	YBR152W	YKL107W	P34251	309 aa		5.67	□□□□□ -1.5
SPP381	YBR152W	NAN1	Q02931	896 aa	Known RBP	5.67	□□□□□ -1.5
SPP381	YBR152W	TPP1	Q03796	238 aa		5.67	□□□□□ -1.5
SPP381	YBR152W	YOL098C	Q12496	1037 aa		5.67	□□□□□ -1.5
SPP381	YBR152W	AIM44	Q99299	758 aa		5.67	□□□□□ -1.5
SPP381	YBR152W	BAS1	P22035	811 aa		5.66	□□□□□ -1.5
SPP381	YBR152W	GRX1	P25373	110 aa	Known RBP	5.66	□□□□□ -1.5
SPP381	YBR152W	SRO9	P25567	434 aa	Known RBP	5.66	□□□□□ -1.5
SPP381	YBR152W	KAE1	P36132	386 aa		5.66	□□□□□ -1.5
SPP381	YBR152W	AKR1	P39010	764 aa		5.66	□□□□□ -1.5
SPP381	YBR152W	IRR1	P40541	1150 aa		5.66	□□□□□ -1.5
SPP381	YBR152W	CCT8	P47079	568 aa	Known RBP	5.66	□□□□□ -1.5
SPP381	YBR152W	HOS3	Q02959	697 aa	Known RBP	5.66	□□□□□ -1.5
SPP381	YBR152W	FPR4	Q06205	392 aa	Predicted RBP	5.66	□□□□□ -1.5
SPP381	YBR152W	AOS1	Q06624	347 aa		5.66	□□□□□ -1.5
SPP381	YBR152W	SPO21	Q12411	609 aa		5.66	□□□□□ -1.5
SPP381	YBR152W	YTA7	P40340	1379 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms