RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	HIR3	P47171	1648 aa		4.67	□□□□□ -1.66
CMD1	YBR109C	CHD1	P32657	1468 aa		4.67	□□□□□ -1.66
CMD1	YBR109C	SQT1	P35184	431 aa		4.66	□□□□□ -1.66
CMD1	YBR109C	PEX28	P38848	579 aa		4.66	□□□□□ -1.66
CMD1	YBR109C	VAC8	P39968	578 aa		4.66	□□□□□ -1.66
CMD1	YBR109C	NOG1	Q02892	647 aa	Known RBP	4.66	□□□□□ -1.66
CMD1	YBR109C	HTS1	P07263	546 aa	Known RBP	4.65	□□□□□ -1.67
CMD1	YBR109C	DUT1	P33317	147 aa		4.65	□□□□□ -1.67
CMD1	YBR109C	OCA5	P38738	679 aa		4.65	□□□□□ -1.67
CMD1	YBR109C	PAN5	P38787	379 aa		4.65	□□□□□ -1.67
CMD1	YBR109C	FET4	P40988	552 aa		4.65	□□□□□ -1.67
CMD1	YBR109C	GUP1	P53154	560 aa		4.65	□□□□□ -1.67
CMD1	YBR109C	PEX13	P80667	386 aa		4.65	□□□□□ -1.67
CMD1	YBR109C	GSF2	Q04697	403 aa	Known RBP	4.65	□□□□□ -1.67
CMD1	YBR109C	MON2	P48563	1636 aa	Predicted RBP	4.64	□□□□□ -1.67
CMD1	YBR109C	GCR1	P07261	785 aa		4.64	□□□□□ -1.67
CMD1	YBR109C	CDC34	P14682	295 aa		4.64	□□□□□ -1.67
CMD1	YBR109C	SEC23	P15303	768 aa	Known RBP	4.64	□□□□□ -1.67
CMD1	YBR109C	PRP6	P19735	899 aa	Predicted RBP	4.64	□□□□□ -1.67
CMD1	YBR109C	MSH3	P25336	1018 aa		4.64	□□□□□ -1.67
CMD1	YBR109C	EXO5	P38289	585 aa		4.64	□□□□□ -1.67
CMD1	YBR109C	NEO1	P40527	1151 aa		4.64	□□□□□ -1.67
CMD1	YBR109C	XKS1	P42826	600 aa		4.64	□□□□□ -1.67
CMD1	YBR109C	NNF1	P47149	201 aa		4.64	□□□□□ -1.67
CMD1	YBR109C	YGL140C	P53120	1219 aa		4.64	□□□□□ -1.67
CMD1	YBR109C	HAS1	Q03532	505 aa	Known RBP	4.64	□□□□□ -1.67
CMD1	YBR109C	SIN3	P22579	1536 aa		4.63	□□□□□ -1.67
CMD1	YBR109C	MYO2	P19524	1574 aa	Known RBP	4.63	□□□□□ -1.67
CMD1	YBR109C	HEM13	P11353	328 aa	Known RBP	4.63	□□□□□ -1.67
CMD1	YBR109C	SHU2	P38957	223 aa		4.63	□□□□□ -1.67
CMD1	YBR109C	GNP1	P48813	663 aa		4.63	□□□□□ -1.67
CMD1	YBR109C	CWC24	P53769	259 aa		4.63	□□□□□ -1.67
CMD1	YBR109C	TAF2	P23255	1407 aa		4.63	□□□□□ -1.67
CMD1	YBR109C	REV3	P14284	1504 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.62	□□□□□ -1.67
CMD1	YBR109C	TY1A-DR6	P0CX70	440 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	TY1A-ER1	P0CX71	440 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	TY1A-LR2	P0CX72	440 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	TY1A-PL	P0CX73	440 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	TY1A-JR1	P0CX74	440 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	TY1A-LR3	P0CX75	440 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	TY1A-ML2	P0CX76	440 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	HSP78	P33416	811 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	MAE1	P36013	669 aa	Known RBP	4.62	□□□□□ -1.67
CMD1	YBR109C	RDH54	P38086	958 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	LEM3	P42838	414 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	FAA4	P47912	694 aa	Known RBP	4.62	□□□□□ -1.67
CMD1	YBR109C	GDE1	Q02979	1223 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	GIC2	Q06648	383 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	MRL1	Q06815	381 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	RTT10	Q08924	1013 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	TY1A-GR1	Q12085	440 aa		4.62	□□□□□ -1.67
CMD1	YBR109C	SSF2	Q12153	453 aa	Predicted RBP	4.62	□□□□□ -1.67
CMD1	YBR109C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.62	□□□□□ -1.67
CMD1	YBR109C	TY1A-OL	Q92392	440 aa	Known RBP	4.62	□□□□□ -1.67
CMD1	YBR109C	TAF13	P11747	167 aa		4.61	□□□□□ -1.67
CMD1	YBR109C	YKL077W	P36081	392 aa		4.61	□□□□□ -1.67
CMD1	YBR109C	UTP22	P53254	1237 aa	Predicted RBP	4.61	□□□□□ -1.67
CMD1	YBR109C	YIG1	Q08956	461 aa		4.61	□□□□□ -1.67
CMD1	YBR109C	YTA7	P40340	1379 aa		4.61	□□□□□ -1.67
CMD1	YBR109C	SWR1	Q05471	1514 aa		4.61	□□□□□ -1.67
CMD1	YBR109C	NEM1	P38757	446 aa		4.6	□□□□□ -1.67
CMD1	YBR109C	HXT13	P39924	564 aa		4.6	□□□□□ -1.67
CMD1	YBR109C	POL5	P39985	1022 aa	Known RBP	4.6	□□□□□ -1.67
CMD1	YBR109C	YGR053C	P53234	283 aa		4.6	□□□□□ -1.67
CMD1	YBR109C	HXT17	P53631	564 aa		4.6	□□□□□ -1.67
CMD1	YBR109C	HXT15	P54854	567 aa		4.6	□□□□□ -1.67
CMD1	YBR109C	EEB1	Q02891	456 aa		4.6	□□□□□ -1.67
CMD1	YBR109C	SPO71	Q03868	1245 aa		4.6	□□□□□ -1.67
CMD1	YBR109C	VMA4	P22203	233 aa	Known RBP	4.59	□□□□□ -1.67
CMD1	YBR109C	SLS1	P42900	643 aa		4.59	□□□□□ -1.67
CMD1	YBR109C	SSK2	P53599	1579 aa		4.59	□□□□□ -1.67
CMD1	YBR109C	SIW14	P53965	281 aa		4.59	□□□□□ -1.67
CMD1	YBR109C	MMS22	Q06164	1454 aa		4.59	□□□□□ -1.67
CMD1	YBR109C	NSI1	Q12457	570 aa		4.59	□□□□□ -1.67
CMD1	YBR109C	RAD27	P26793	382 aa		4.58	□□□□□ -1.68
CMD1	YBR109C	ROD1	Q02805	837 aa		4.58	□□□□□ -1.68
CMD1	YBR109C	UTP5	Q04177	643 aa	Known RBP	4.58	□□□□□ -1.68
CMD1	YBR109C	TMA46	Q12000	345 aa	Known RBP	4.58	□□□□□ -1.68
CMD1	YBR109C	WRS1	Q12109	432 aa	Known RBP	4.58	□□□□□ -1.68
CMD1	YBR109C	YOL098C	Q12496	1037 aa		4.58	□□□□□ -1.68
CMD1	YBR109C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
CMD1	YBR109C	PRI2	P20457	528 aa		4.57	□□□□□ -1.68
CMD1	YBR109C	NFS1	P25374	497 aa		4.57	□□□□□ -1.68
CMD1	YBR109C	ARL1	P38116	183 aa	Known RBP	4.57	□□□□□ -1.68
CMD1	YBR109C	MTR4	P47047	1073 aa	Known RBP	4.57	□□□□□ -1.68
CMD1	YBR109C	ENT3	P47160	408 aa		4.57	□□□□□ -1.68
CMD1	YBR109C	GCV1	P48015	400 aa		4.57	□□□□□ -1.68
CMD1	YBR109C	MEC3	Q02574	474 aa		4.57	□□□□□ -1.68
CMD1	YBR109C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
CMD1	YBR109C	OPI10	Q08202	246 aa		4.57	□□□□□ -1.68
CMD1	YBR109C	ELG1	Q12050	791 aa		4.57	□□□□□ -1.68
CMD1	YBR109C	ERS1	P17261	260 aa		4.56	□□□□□ -1.68
CMD1	YBR109C	RER2	P35196	286 aa		4.56	□□□□□ -1.68
CMD1	YBR109C	YKL069W	P36088	180 aa		4.56	□□□□□ -1.68
CMD1	YBR109C	MMM1	P41800	426 aa		4.56	□□□□□ -1.68
CMD1	YBR109C	EST2	Q06163	884 aa		4.56	□□□□□ -1.68
CMD1	YBR109C	AIM44	Q99299	758 aa		4.56	□□□□□ -1.68
CMD1	YBR109C	TRP2	P00899	507 aa	Known RBP	4.55	□□□□□ -1.68
CMD1	YBR109C	DED1	P06634	604 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms