RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C KIP3P53086 805 aaKnown RBP6.65□□□□□ -1.35
YPK3YBR028C YNR063WP53749 607 aa6.65□□□□□ -1.35
YPK3YBR028C DSE4P53753 1117 aa6.65□□□□□ -1.35
YPK3YBR028C TIF35Q04067 274 aaKnown RBP6.65□□□□□ -1.35
YPK3YBR028C NSE3Q05541 303 aa6.65□□□□□ -1.35
YPK3YBR028C AI1P03875 834 aa6.64□□□□□ -1.35
YPK3YBR028C SYP1P25623 870 aaKnown RBP6.64□□□□□ -1.35
YPK3YBR028C ABD1P32783 436 aaPredicted RBP6.64□□□□□ -1.35
YPK3YBR028C BOI2P39969 1040 aa6.64□□□□□ -1.35
YPK3YBR028C MOT2P34909 587 aaKnown RBP6.63□□□□□ -1.35
YPK3YBR028C YFL066CP43538 392 aa6.63□□□□□ -1.35
YPK3YBR028C YGR045CP53229 120 aa6.63□□□□□ -1.35
YPK3YBR028C YNR014WP53719 212 aa6.63□□□□□ -1.35
YPK3YBR028C YLR225CQ05948 407 aaKnown RBP6.63□□□□□ -1.35
YPK3YBR028C GAS5Q08193 484 aa6.63□□□□□ -1.35
YPK3YBR028C TY1A-NL1Q12391 440 aaKnown RBP6.63□□□□□ -1.35
YPK3YBR028C TRK2P28584 889 aa6.62□□□□□ -1.35
YPK3YBR028C YAR028WP39548 234 aa6.62□□□□□ -1.35
YPK3YBR028C SPO20Q04359 397 aa6.62□□□□□ -1.35
YPK3YBR028C FPR4Q06205 392 aaPredicted RBP6.62□□□□□ -1.35
YPK3YBR028C BDF2Q07442 638 aa6.62□□□□□ -1.35
YPK3YBR028C YOR223WQ12015 292 aa6.62□□□□□ -1.35
YPK3YBR028C YLL054CQ12244 843 aa6.62□□□□□ -1.35
YPK3YBR028C INO1P11986 533 aa6.61□□□□□ -1.35
YPK3YBR028C RAD4P14736 754 aa6.61□□□□□ -1.35
YPK3YBR028C DBP5P20449 482 aaKnown RBP6.61□□□□□ -1.35
YPK3YBR028C AGP1P25376 633 aa6.61□□□□□ -1.35
YPK3YBR028C SRP40P32583 406 aaPredicted RBP6.61□□□□□ -1.35
YPK3YBR028C STE5P32917 917 aa6.61□□□□□ -1.35
YPK3YBR028C ALG3P38179 458 aa6.61□□□□□ -1.35
YPK3YBR028C CNN1P43618 361 aa6.61□□□□□ -1.35
YPK3YBR028C NAN1Q02931 896 aaKnown RBP6.61□□□□□ -1.35
YPK3YBR028C AOS1Q06624 347 aa6.61□□□□□ -1.35
YPK3YBR028C YPL066WQ12194 479 aa6.61□□□□□ -1.35
YPK3YBR028C NCE103P53615 221 aa6.61□□□□□ -1.35
YPK3YBR028C ELA1P53861 379 aaPredicted RBP6.61□□□□□ -1.35
YPK3YBR028C DOT1Q04089 582 aaKnown RBP6.61□□□□□ -1.35
YPK3YBR028C STI1P15705 589 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
YPK3YBR028C SBA1P28707 216 aaKnown RBP6.6□□□□□ -1.35
YPK3YBR028C YKL091CP33324 310 aaKnown RBP6.6□□□□□ -1.35
YPK3YBR028C MPH1P40562 993 aa6.6□□□□□ -1.35
YPK3YBR028C HUL5P53119 910 aa6.6□□□□□ -1.35
YPK3YBR028C BUD9P53226 547 aa6.6□□□□□ -1.35
YPK3YBR028C YPL062WQ02781 134 aa6.6□□□□□ -1.35
YPK3YBR028C AVO1Q08236 1176 aa6.6□□□□□ -1.35
YPK3YBR028C CDC53Q12018 815 aaKnown RBP6.6□□□□□ -1.35
YPK3YBR028C PUF4P25339 888 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
YPK3YBR028C VBA5P36172 582 aa6.59□□□□□ -1.35
YPK3YBR028C ATG14P38270 344 aa6.59□□□□□ -1.35
YPK3YBR028C SHE9Q04172 456 aa6.59□□□□□ -1.35
YPK3YBR028C TDA6Q06466 467 aa6.59□□□□□ -1.35
YPK3YBR028C THI72Q08579 599 aa6.59□□□□□ -1.35
YPK3YBR028C YBR184WP38299 523 aa6.58□□□□□ -1.36
YPK3YBR028C LAP2Q10740 671 aa6.58□□□□□ -1.36
YPK3YBR028C PTC5Q12511 572 aa6.58□□□□□ -1.36
YPK3YBR028C MCM7P38132 845 aa6.57□□□□□ -1.36
YPK3YBR028C MCX1P38323 520 aaPredicted RBP6.57□□□□□ -1.36
YPK3YBR028C TIM54P47045 478 aa6.57□□□□□ -1.36
YPK3YBR028C RPN4Q03465 531 aa6.57□□□□□ -1.36
YPK3YBR028C RSA3Q05942 220 aaKnown RBP6.57□□□□□ -1.36
YPK3YBR028C RKM4Q12504 494 aa6.57□□□□□ -1.36
YPK3YBR028C CIT2P08679 460 aa6.57□□□□□ -1.36
YPK3YBR028C SFA1P32771 386 aa6.57□□□□□ -1.36
YPK3YBR028C MDJ1P35191 511 aa6.57□□□□□ -1.36
YPK3YBR028C GPT2P36148 743 aa6.57□□□□□ -1.36
YPK3YBR028C YHR020WP38708 688 aaKnown RBP6.57□□□□□ -1.36
YPK3YBR028C BUD6P41697 788 aa6.57□□□□□ -1.36
YPK3YBR028C YGL176CP46945 554 aa6.57□□□□□ -1.36
YPK3YBR028C AI3P03877 415 aa6.56□□□□□ -1.36
YPK3YBR028C MLS1P30952 554 aa6.56□□□□□ -1.36
YPK3YBR028C PBP2P38151 413 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
YPK3YBR028C RGD1P38339 666 aa6.56□□□□□ -1.36
YPK3YBR028C QNS1P38795 714 aaKnown RBP6.56□□□□□ -1.36
YPK3YBR028C YKL107WP34251 309 aa6.55□□□□□ -1.36
YPK3YBR028C MRP8P35719 219 aa6.55□□□□□ -1.36
YPK3YBR028C MSH4P40965 878 aaPredicted RBP6.55□□□□□ -1.36
YPK3YBR028C PFD1P46988 109 aa6.55□□□□□ -1.36
YPK3YBR028C PRY1P47032 299 aa6.55□□□□□ -1.36
YPK3YBR028C VPS53P47061 822 aa6.55□□□□□ -1.36
YPK3YBR028C HNT2P49775 206 aa6.55□□□□□ -1.36
YPK3YBR028C RET1P22276 1149 aaKnown RBP6.54□□□□□ -1.36
YPK3YBR028C HSE1P38753 452 aa6.54□□□□□ -1.36
YPK3YBR028C KRI1P42846 591 aaKnown RBP6.54□□□□□ -1.36
YPK3YBR028C NSG2P53898 299 aa6.54□□□□□ -1.36
YPK3YBR028C FMP25Q08023 583 aa6.54□□□□□ -1.36
YPK3YBR028C PPM2Q08282 695 aa6.54□□□□□ -1.36
YPK3YBR028C RPL8BP29453 256 aaKnown RBP6.53□□□□□ -1.36
YPK3YBR028C SMY2P32909 740 aaKnown RBP6.53□□□□□ -1.36
YPK3YBR028C MBP1P39678 833 aa6.53□□□□□ -1.36
YPK3YBR028C SIP5P40210 489 aaKnown RBP6.53□□□□□ -1.36
YPK3YBR028C IRR1P40541 1150 aa6.53□□□□□ -1.36
YPK3YBR028C YLR257WQ06146 321 aaKnown RBP6.53□□□□□ -1.36
YPK3YBR028C YDR215CQ12240 137 aa6.53□□□□□ -1.36
YPK3YBR028C KIP1P28742 1111 aa6.52□□□□□ -1.36
YPK3YBR028C PIN4P34217 668 aaKnown RBP RIP-Chip data6.52□□□□□ -1.36not detected
YPK3YBR028C NNK1P36003 928 aa6.52□□□□□ -1.36
YPK3YBR028C NMD3P38861 518 aaKnown RBP6.52□□□□□ -1.36
YPK3YBR028C YOR131CQ12486 218 aa6.52□□□□□ -1.36
YPK3YBR028C YCK2P23292 546 aaKnown RBP6.52□□□□□ -1.37
YPK3YBR028C NFS1P25374 497 aa6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 287.1 ms