RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	SGM1	P47166	707 aa		8.02	□□□□□ -1.13
UBP13	YBL067C	UPF3	P48412	387 aa	Known RBP	8.02	□□□□□ -1.13
UBP13	YBL067C	KXD1	P53158	218 aa		8.02	□□□□□ -1.13
UBP13	YBL067C	PUS6	P53294	404 aa		8.02	□□□□□ -1.13
UBP13	YBL067C	YAP1802	P53309	568 aa		8.02	□□□□□ -1.13
UBP13	YBL067C	DAL4	Q04895	635 aa		8.02	□□□□□ -1.13
UBP13	YBL067C	UGA3	P26370	528 aa		8.01	□□□□□ -1.13
UBP13	YBL067C	NIC96	P34077	839 aa		8.01	□□□□□ -1.13
UBP13	YBL067C	TYS1	P36421	394 aa	Known RBP	8.01	□□□□□ -1.13
UBP13	YBL067C	AIM9	P40053	627 aa	Known RBP	8.01	□□□□□ -1.13
UBP13	YBL067C	GNP1	P48813	663 aa		8.01	□□□□□ -1.13
UBP13	YBL067C	VPS30	Q02948	557 aa		8.01	□□□□□ -1.13
UBP13	YBL067C	MTQ2	Q03920	221 aa	Predicted RBP	8.01	□□□□□ -1.13
UBP13	YBL067C	PSR2	Q07949	397 aa		8.01	□□□□□ -1.13
UBP13	YBL067C	TUM1	Q08686	304 aa	Known RBP	8.01	□□□□□ -1.13
UBP13	YBL067C	SGT2	Q12118	346 aa	Known RBP	8.01	□□□□□ -1.13
UBP13	YBL067C	TOM70	P07213	617 aa	Known RBP	8.01	□□□□□ -1.13
UBP13	YBL067C	NGR1	P32831	672 aa	Known RBP	8.01	□□□□□ -1.13
UBP13	YBL067C	MGS1	P40151	587 aa		8.01	□□□□□ -1.13
UBP13	YBL067C	STE20	Q03497	939 aa	Known RBP	8.01	□□□□□ -1.13
UBP13	YBL067C	IDI1	P15496	288 aa		8	□□□□□ -1.13
UBP13	YBL067C	BEM3	P32873	1128 aa		8	□□□□□ -1.13
UBP13	YBL067C	VPS41	P38959	992 aa		8	□□□□□ -1.13
UBP13	YBL067C	YGR250C	P53316	781 aa	Known RBP	8	□□□□□ -1.13
UBP13	YBL067C	RGA2	Q06407	1009 aa		8	□□□□□ -1.13
UBP13	YBL067C	BRE4	Q07660	1125 aa		8	□□□□□ -1.13
UBP13	YBL067C	APL5	Q08951	932 aa	Known RBP	8	□□□□□ -1.13
UBP13	YBL067C	OXR1	Q08952	273 aa		8	□□□□□ -1.13
UBP13	YBL067C	OSH2	Q12451	1283 aa		8	□□□□□ -1.13
UBP13	YBL067C	DAL3	P32459	195 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	SMY2	P32909	740 aa	Known RBP	7.99	□□□□□ -1.13
UBP13	YBL067C	GPD2	P41911	440 aa	Known RBP	7.99	□□□□□ -1.13
UBP13	YBL067C	MRPS18	P42847	217 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	RET2	P43621	546 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	ELA1	P53861	379 aa	Predicted RBP	7.99	□□□□□ -1.13
UBP13	YBL067C	RSC4	Q02206	625 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	SAS4	Q04003	481 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	YKL050C	P35736	922 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	EAP1	P36041	632 aa	Known RBP	7.99	□□□□□ -1.13
UBP13	YBL067C	VBA5	P36172	582 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	HUL4	P40985	892 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	EIS1	Q05050	843 aa	Known RBP	7.99	□□□□□ -1.13
UBP13	YBL067C	RSC2	Q06488	889 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	SPO75	Q07798	868 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	NOC3	Q07896	663 aa	Predicted RBP	7.99	□□□□□ -1.13
UBP13	YBL067C	RSC58	Q07979	502 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	TRE2	Q08693	809 aa		7.99	□□□□□ -1.13
UBP13	YBL067C	SBP1	P10080	294 aa	Known RBP	7.98	□□□□□ -1.13
UBP13	YBL067C	SAN1	P22470	610 aa		7.98	□□□□□ -1.13
UBP13	YBL067C	ABD1	P32783	436 aa	Predicted RBP	7.98	□□□□□ -1.13
UBP13	YBL067C	PTH2	P34222	208 aa		7.98	□□□□□ -1.13
UBP13	YBL067C	XDJ1	P39102	459 aa		7.98	□□□□□ -1.13
UBP13	YBL067C	HIS6	P40545	261 aa		7.98	□□□□□ -1.13
UBP13	YBL067C	SNP1	Q00916	300 aa	Predicted RBP	7.98	□□□□□ -1.13
UBP13	YBL067C	YPL109C	Q02981	657 aa		7.98	□□□□□ -1.13
UBP13	YBL067C	EAF1	Q06337	982 aa		7.98	□□□□□ -1.13
UBP13	YBL067C	MLC2	Q06580	163 aa		7.98	□□□□□ -1.13
UBP13	YBL067C	TCB1	Q12466	1186 aa		7.98	□□□□□ -1.13
UBP13	YBL067C	MCM5	P29496	775 aa	Known RBP	7.98	□□□□□ -1.13
UBP13	YBL067C	ATP22	P50273	684 aa	Predicted RBP	7.98	□□□□□ -1.13
UBP13	YBL067C	ARA2	Q04212	335 aa		7.98	□□□□□ -1.13
UBP13	YBL067C	MDM12	Q92328	271 aa		7.98	□□□□□ -1.13
UBP13	YBL067C	AI4	P03878	556 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	TEC1	P18412	486 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	LRP1	P38801	184 aa	Known RBP	7.97	□□□□□ -1.13
UBP13	YBL067C	ACA1	P39970	489 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	SAE2	P46946	345 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	YJL055W	P47044	245 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	PBP1	P53297	722 aa	Known RBP	7.97	□□□□□ -1.13
UBP13	YBL067C	SDA1	P53313	767 aa	Known RBP	7.97	□□□□□ -1.13
UBP13	YBL067C	HOT1	Q03213	719 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	SGD1	Q06132	899 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	TFB4	Q12004	338 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	ARE1	P25628	610 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	SCT1	P32784	759 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	NTH2	P35172	780 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	TPA1	P40032	644 aa	Known RBP	7.97	□□□□□ -1.13
UBP13	YBL067C	SUT1	P53032	299 aa	Known RBP	7.97	□□□□□ -1.13
UBP13	YBL067C	MCD1	Q12158	566 aa		7.97	□□□□□ -1.13
UBP13	YBL067C	RRP36	Q12481	300 aa	Predicted RBP	7.97	□□□□□ -1.13
UBP13	YBL067C	KEX2	P13134	814 aa		7.96	□□□□□ -1.14
UBP13	YBL067C	NIT2	P47016	307 aa		7.96	□□□□□ -1.14
UBP13	YBL067C	UTP8	P53276	713 aa	Known RBP	7.96	□□□□□ -1.14
UBP13	YBL067C	TAF11	Q04226	346 aa		7.96	□□□□□ -1.14
UBP13	YBL067C	TOP3	P13099	656 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	MET8	P15807	274 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	TMA108	P40462	946 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	IRR1	P40541	1150 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	GTR1	Q00582	310 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	YDL206W	Q12424	762 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	PRP40	P33203	583 aa	Known RBP	7.95	□□□□□ -1.14
UBP13	YBL067C	TBS1	P38114	1094 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	HXT8	P40886	569 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	SUM1	P46676	1062 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	ISM1	P48526	1002 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	PCL10	P53124	433 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	AGE1	Q04412	482 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	HDA3	Q06623	655 aa		7.95	□□□□□ -1.14
UBP13	YBL067C	INP54	Q08227	384 aa	Known RBP	7.95	□□□□□ -1.14
UBP13	YBL067C	RTT10	Q08924	1013 aa		7.95	□□□□□ -1.14

Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms